RNA–Protein interactions for RNA: ENST00000476015.1

LAMP3-204, Transcript of lysosomal associated membrane protein 3, humanhuman

TSL 4

Gene LAMP3, Length 835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP3-204ENST00000476015 PDE3BQ13370 1112 aa23.81■■□□□ 1.4
LAMP3-204ENST00000476015 SALL2Q9Y467 1007 aaPredicted RBP23.81■■□□□ 1.4
LAMP3-204ENST00000476015 PXDNQ92626 1479 aa23.81■■□□□ 1.4
LAMP3-204ENST00000476015 IP6K1Q92551 441 aa23.8■■□□□ 1.4
LAMP3-204ENST00000476015 TNS3Q68CZ2 1445 aa23.79■■□□□ 1.4
LAMP3-204ENST00000476015 NEFMP07197 916 aa23.79■■□□□ 1.4
LAMP3-204ENST00000476015 HOXC9P31274 260 aa23.79■■□□□ 1.4
LAMP3-204ENST00000476015 EIF4A2Q14240 407 aaKnown RBP23.79■■□□□ 1.4
LAMP3-204ENST00000476015 NCBP3Q53F19 620 aaKnown RBP23.79■■□□□ 1.4
LAMP3-204ENST00000476015 SRCAPQ6ZRS2 3230 aa23.78■■□□□ 1.4
LAMP3-204ENST00000476015 SENP3-EIF4A1A0A087X0R7 540 aa23.78■■□□□ 1.4
LAMP3-204ENST00000476015 MARF1Q9Y4F3 1742 aaKnown RBP23.77■■□□□ 1.4
LAMP3-204ENST00000476015 ARHGEF25Q86VW2 580 aa23.77■■□□□ 1.4
LAMP3-204ENST00000476015 TCP11L2Q8N4U5 519 aa23.77■■□□□ 1.4
LAMP3-204ENST00000476015 PLEKHF1Q96S99 279 aa23.76■■□□□ 1.39
LAMP3-204ENST00000476015 LRP6O75581 1613 aa23.76■■□□□ 1.39
LAMP3-204ENST00000476015 ALS2Q96Q42 1657 aa23.76■■□□□ 1.39
LAMP3-204ENST00000476015 RTL1A6NKG5 1358 aa23.76■■□□□ 1.39
LAMP3-204ENST00000476015 SLIT3O75094 1523 aa23.75■■□□□ 1.39
LAMP3-204ENST00000476015 PLEKHG5O94827 1062 aa23.75■■□□□ 1.39
LAMP3-204ENST00000476015 MAPK8IP3Q9UPT6 1336 aa23.75■■□□□ 1.39
LAMP3-204ENST00000476015 ZNF772Q68DY9 489 aaPredicted RBP23.74■■□□□ 1.39
LAMP3-204ENST00000476015 COL16A1Q07092 1604 aaPredicted RBP23.73■■□□□ 1.39
LAMP3-204ENST00000476015 LRRC59Q96AG4 307 aaKnown RBP23.73■■□□□ 1.39
LAMP3-204ENST00000476015 RSPH6AQ9H0K4 717 aa23.73■■□□□ 1.39
LAMP3-204ENST00000476015 ZBTB7CA1YPR0 619 aa23.72■■□□□ 1.39
LAMP3-204ENST00000476015 HMOX1P09601 288 aa23.72■■□□□ 1.39
LAMP3-204ENST00000476015 SPATA31A6Q5VVP1 1343 aa23.72■■□□□ 1.39
LAMP3-204ENST00000476015 NFAT5O94916 1531 aa23.72■■□□□ 1.39
LAMP3-204ENST00000476015 PEAK1Q9H792 1746 aa23.72■■□□□ 1.39
LAMP3-204ENST00000476015 PRKAR2BP31323 418 aa23.71■■□□□ 1.39
LAMP3-204ENST00000476015 MEX3CQ5U5Q3 659 aaKnown RBP23.71■■□□□ 1.39
LAMP3-204ENST00000476015 CCDC27Q2M243 656 aa23.7■■□□□ 1.38
LAMP3-204ENST00000476015 SULT6B1Q6IMI4 303 aa23.7■■□□□ 1.38
LAMP3-204ENST00000476015 ZC3H6P61129 1189 aaKnown RBP23.69■■□□□ 1.38
LAMP3-204ENST00000476015 CABLES1Q8TDN4 633 aa23.69■■□□□ 1.38
LAMP3-204ENST00000476015 TMPOP42166 694 aaKnown RBP23.68■■□□□ 1.38
LAMP3-204ENST00000476015 GOLGA2Q08379 1002 aa23.68■■□□□ 1.38
LAMP3-204ENST00000476015 NEUROD2Q15784 382 aa23.68■■□□□ 1.38
LAMP3-204ENST00000476015 EYA1Q99502 592 aa23.68■■□□□ 1.38
LAMP3-204ENST00000476015 RXRBP28702 533 aa23.67■■□□□ 1.38
LAMP3-204ENST00000476015 LTV1Q96GA3 475 aaPredicted RBP23.67■■□□□ 1.38
LAMP3-204ENST00000476015 NHSL1Q5SYE7 1610 aa23.66■■□□□ 1.38
LAMP3-204ENST00000476015 ZNF521Q96K83 1311 aa23.66■■□□□ 1.38
LAMP3-204ENST00000476015 HAP1P54257 671 aaPredicted RBP23.66■■□□□ 1.38
LAMP3-204ENST00000476015 WWC1Q8IX03 1113 aa23.66■■□□□ 1.38
LAMP3-204ENST00000476015 RRP7AQ9Y3A4 280 aaKnown RBP23.66■■□□□ 1.38
LAMP3-204ENST00000476015 WDR63Q8IWG1 891 aa23.65■■□□□ 1.38
LAMP3-204ENST00000476015 RIPK4P57078 832 aa23.64■■□□□ 1.37
LAMP3-204ENST00000476015 IGSF1Q8N6C5 1336 aa23.63■■□□□ 1.37
LAMP3-204ENST00000476015 LTN1O94822 1766 aa23.63■■□□□ 1.37
LAMP3-204ENST00000476015 PHACTR3Q96KR7 559 aa23.63■■□□□ 1.37
LAMP3-204ENST00000476015 PHRF1Q9P1Y6 1649 aaKnown RBP23.62■■□□□ 1.37
LAMP3-204ENST00000476015 NFE2L2Q16236 605 aa23.62■■□□□ 1.37
LAMP3-204ENST00000476015 CDCA7LQ96GN5 454 aa23.62■■□□□ 1.37
LAMP3-204ENST00000476015 CPDO75976 1380 aa23.62■■□□□ 1.37
LAMP3-204ENST00000476015 AEBP1Q8IUX7 1158 aa23.61■■□□□ 1.37
LAMP3-204ENST00000476015 ANKRD24Q8TF21 1146 aa23.61■■□□□ 1.37
LAMP3-204ENST00000476015 AHDC1Q5TGY3 1603 aaPredicted RBP23.6■■□□□ 1.37
LAMP3-204ENST00000476015 SLFN5Q08AF3 891 aa23.6■■□□□ 1.37
LAMP3-204ENST00000476015 AXIN2Q9Y2T1 843 aa23.6■■□□□ 1.37
LAMP3-204ENST00000476015 E9PSI1 815 aa23.59■■□□□ 1.37
LAMP3-204ENST00000476015 KDRP35968 1356 aa23.58■■□□□ 1.37
LAMP3-204ENST00000476015 RGPD1P0DJD0 1748 aa23.57■■□□□ 1.36
LAMP3-204ENST00000476015 NUTM2BA6NNL0 878 aaPredicted RBP23.57■■□□□ 1.36
LAMP3-204ENST00000476015 NUTM2EB1AL46 878 aaPredicted RBP23.57■■□□□ 1.36
LAMP3-204ENST00000476015 LMOD3Q0VAK6 560 aa23.57■■□□□ 1.36
LAMP3-204ENST00000476015 NBPF6Q5VWK0 638 aa23.57■■□□□ 1.36
LAMP3-204ENST00000476015 NUTM2AQ8IVF1 878 aaPredicted RBP23.57■■□□□ 1.36
LAMP3-204ENST00000476015 TRMT2AQ8IZ69 625 aaKnown RBP23.57■■□□□ 1.36
LAMP3-204ENST00000476015 NBPF4Q96M43 638 aa23.57■■□□□ 1.36
LAMP3-204ENST00000476015 PRDM11Q9NQV5 511 aa23.57■■□□□ 1.36
LAMP3-204ENST00000476015 TRIM35Q9UPQ4 493 aa23.57■■□□□ 1.36
LAMP3-204ENST00000476015 KIAA0232Q92628 1395 aa23.56■■□□□ 1.36
LAMP3-204ENST00000476015 CHRNA2Q15822 529 aa23.55■■□□□ 1.36
LAMP3-204ENST00000476015 CALD1Q05682 793 aaKnown RBP23.54■■□□□ 1.36
LAMP3-204ENST00000476015 DUSP27Q5VZP5 1158 aa23.53■■□□□ 1.36
LAMP3-204ENST00000476015 AFF2P51816 1311 aa23.53■■□□□ 1.36
LAMP3-204ENST00000476015 IL16Q14005 1332 aa23.53■■□□□ 1.36
LAMP3-204ENST00000476015 ABCC6O95255 1503 aa23.53■■□□□ 1.36
LAMP3-204ENST00000476015 CRYBG1Q9Y4K1 1723 aa23.53■■□□□ 1.36
LAMP3-204ENST00000476015 CSB-PGBD3P0DP91 1061 aa23.52■■□□□ 1.36
LAMP3-204ENST00000476015 GAS2L2Q8NHY3 880 aa23.52■■□□□ 1.36
LAMP3-204ENST00000476015 MYH16Q9H6N6 1097 aa23.51■■□□□ 1.35
LAMP3-204ENST00000476015 SUPT16HQ9Y5B9 1047 aaKnown RBP23.51■■□□□ 1.35
LAMP3-204ENST00000476015 ERBB3P21860 1342 aa23.51■■□□□ 1.35
LAMP3-204ENST00000476015 USHBP1Q8N6Y0 703 aa23.5■■□□□ 1.35
LAMP3-204ENST00000476015 NLRP2Q9NX02 1062 aa23.5■■□□□ 1.35
LAMP3-204ENST00000476015 FAM83GA6ND36 823 aa23.49■■□□□ 1.35
LAMP3-204ENST00000476015 MTHFSDQ2M296 383 aaKnown RBP23.49■■□□□ 1.35
LAMP3-204ENST00000476015 SPINK5Q9NQ38 1064 aaPredicted RBP23.49■■□□□ 1.35
LAMP3-204ENST00000476015 COL18A1P39060 1754 aa23.49■■□□□ 1.35
LAMP3-204ENST00000476015 HTATSF1O43719 755 aaKnown RBP23.48■■□□□ 1.35
LAMP3-204ENST00000476015 PLEKHO1Q53GL0 409 aaPredicted RBP23.48■■□□□ 1.35
LAMP3-204ENST00000476015 EVA1CP58658 441 aa23.47■■□□□ 1.35
LAMP3-204ENST00000476015 AMOTQ4VCS5 1084 aa23.47■■□□□ 1.35
LAMP3-204ENST00000476015 GTF3C3Q9Y5Q9 886 aa23.47■■□□□ 1.35
LAMP3-204ENST00000476015 RGS12O14924 1447 aa23.47■■□□□ 1.35
LAMP3-204ENST00000476015 RTF1Q92541 710 aaKnown RBP23.46■■□□□ 1.35
LAMP3-204ENST00000476015 RCAN3Q9UKA8 241 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms