RNA–Protein interactions for RNA: ENST00000475627.1

HLA-DMA-207, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 984 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-207ENST00000475627 STK25O00506 426 aa11.04□□□□□ -0.64
HLA-DMA-207ENST00000475627 ABCB7O75027 752 aa11.04□□□□□ -0.64
HLA-DMA-207ENST00000475627 PLEKHG5O94827 1062 aa11.04□□□□□ -0.64
HLA-DMA-207ENST00000475627 GSE1Q14687 1217 aa11.04□□□□□ -0.64
HLA-DMA-207ENST00000475627 RALBP1Q15311 655 aa11.04□□□□□ -0.64
HLA-DMA-207ENST00000475627 DIEXFQ68CQ4 756 aaKnown RBP11.04□□□□□ -0.64
HLA-DMA-207ENST00000475627 RSPH6AQ9H0K4 717 aa11.04□□□□□ -0.64
HLA-DMA-207ENST00000475627 SPATA31A3Q5VYP0 1347 aa11.04□□□□□ -0.64
HLA-DMA-207ENST00000475627 TRPM3Q9HCF6 1732 aaPredicted RBP11.04□□□□□ -0.64
HLA-DMA-207ENST00000475627 USP31Q70CQ4 1352 aa11.03□□□□□ -0.64
HLA-DMA-207ENST00000475627 MORC1Q86VD1 984 aa11.03□□□□□ -0.64
HLA-DMA-207ENST00000475627 CARD14Q9BXL6 1004 aa11.03□□□□□ -0.64
HLA-DMA-207ENST00000475627 SLC24A3Q9HC58 644 aa11.03□□□□□ -0.64
HLA-DMA-207ENST00000475627 ANKRD26Q9UPS8 1709 aa11.03□□□□□ -0.64
HLA-DMA-207ENST00000475627 MED1Q15648 1581 aaPredicted RBP11.03□□□□□ -0.64
HLA-DMA-207ENST00000475627 USP54Q70EL1 1684 aa11.02□□□□□ -0.64
HLA-DMA-207ENST00000475627 PER1O15534 1290 aaPredicted RBP11.02□□□□□ -0.65
HLA-DMA-207ENST00000475627 NLRP6P59044 892 aa11.02□□□□□ -0.65
HLA-DMA-207ENST00000475627 CHRDL2Q6WN34 429 aa11.02□□□□□ -0.65
HLA-DMA-207ENST00000475627 FBXO41Q8TF61 875 aa11.02□□□□□ -0.65
HLA-DMA-207ENST00000475627 SSUH2Q9Y2M2 353 aa11.02□□□□□ -0.65
HLA-DMA-207ENST00000475627 COL16A1Q07092 1604 aaPredicted RBP11.02□□□□□ -0.65
HLA-DMA-207ENST00000475627 JCADQ9P266 1359 aa11.02□□□□□ -0.65
HLA-DMA-207ENST00000475627 ALS2Q96Q42 1657 aa11.01□□□□□ -0.65
HLA-DMA-207ENST00000475627 OVOS2A0A0J9YW53 1432 aa11.01□□□□□ -0.65
HLA-DMA-207ENST00000475627 OVOS2Q6IE36 1432 aa11.01□□□□□ -0.65
HLA-DMA-207ENST00000475627 XPCQ01831 940 aaPredicted RBP11.01□□□□□ -0.65
HLA-DMA-207ENST00000475627 PIK3C2AO00443 1686 aa11.01□□□□□ -0.65
HLA-DMA-207ENST00000475627 FYB1O15117 783 aa11□□□□□ -0.65
HLA-DMA-207ENST00000475627 CC2D1BQ5T0F9 858 aaKnown RBP11□□□□□ -0.65
HLA-DMA-207ENST00000475627 NME9Q86XW9 330 aa11□□□□□ -0.65
HLA-DMA-207ENST00000475627 RBM42Q9BTD8 480 aaKnown RBP10.99□□□□□ -0.65
HLA-DMA-207ENST00000475627 GGNBP2Q9H3C7 697 aa10.99□□□□□ -0.65
HLA-DMA-207ENST00000475627 USP19O94966 1318 aa10.99□□□□□ -0.65
HLA-DMA-207ENST00000475627 SPATA31A6Q5VVP1 1343 aa10.99□□□□□ -0.65
HLA-DMA-207ENST00000475627 KIF24Q5T7B8 1368 aa10.99□□□□□ -0.65
HLA-DMA-207ENST00000475627 AATKQ6ZMQ8 1374 aa10.99□□□□□ -0.65
HLA-DMA-207ENST00000475627 PARD3Q8TEW0 1356 aa10.99□□□□□ -0.65
HLA-DMA-207ENST00000475627 COL22A1Q8NFW1 1626 aaPredicted RBP10.98□□□□□ -0.65
HLA-DMA-207ENST00000475627 SHPRHQ149N8 1683 aa10.98□□□□□ -0.65
HLA-DMA-207ENST00000475627 SP7Q8TDD2 431 aaPredicted RBP10.98□□□□□ -0.65
HLA-DMA-207ENST00000475627 DDX17Q92841 729 aaKnown RBP10.98□□□□□ -0.65
HLA-DMA-207ENST00000475627 CFAP53Q96M91 514 aa10.98□□□□□ -0.65
HLA-DMA-207ENST00000475627 MYBBP1AQ9BQG0 1328 aaKnown RBP10.98□□□□□ -0.65
HLA-DMA-207ENST00000475627 SLIT3O75094 1523 aa10.98□□□□□ -0.65
HLA-DMA-207ENST00000475627 PRKRIP1Q9H875 184 aaPredicted RBP10.97□□□□□ -0.65
HLA-DMA-207ENST00000475627 WDR70Q9NW82 654 aa10.97□□□□□ -0.65
HLA-DMA-207ENST00000475627 RTL1A6NKG5 1358 aa10.97□□□□□ -0.65
HLA-DMA-207ENST00000475627 PNPLA6Q8IY17 1366 aa10.97□□□□□ -0.65
HLA-DMA-207ENST00000475627 ABCC6O95255 1503 aa10.97□□□□□ -0.65
HLA-DMA-207ENST00000475627 SGIP1Q9BQI5 828 aa10.96□□□□□ -0.65
HLA-DMA-207ENST00000475627 PHRF1Q9P1Y6 1649 aaKnown RBP10.95□□□□□ -0.66
HLA-DMA-207ENST00000475627 SMG6Q86US8 1419 aaKnown RBP10.95□□□□□ -0.66
HLA-DMA-207ENST00000475627 GCP02774 474 aa10.95□□□□□ -0.66
HLA-DMA-207ENST00000475627 CNGB1Q14028 1251 aaPredicted RBP10.95□□□□□ -0.66
HLA-DMA-207ENST00000475627 NUTM2GQ5VZR2 741 aa10.95□□□□□ -0.66
HLA-DMA-207ENST00000475627 CPDO75976 1380 aa10.94□□□□□ -0.66
HLA-DMA-207ENST00000475627 FLT4P35916 1363 aa10.94□□□□□ -0.66
HLA-DMA-207ENST00000475627 HSPA1LP34931 641 aa10.94□□□□□ -0.66
HLA-DMA-207ENST00000475627 AMPHP49418 695 aa10.94□□□□□ -0.66
HLA-DMA-207ENST00000475627 CDK12Q9NYV4 1490 aaPredicted RBP10.93□□□□□ -0.66
HLA-DMA-207ENST00000475627 BLMP54132 1417 aaPredicted RBP10.93□□□□□ -0.66
HLA-DMA-207ENST00000475627 SOX12O15370 315 aa10.93□□□□□ -0.66
HLA-DMA-207ENST00000475627 TNNT2P45379 298 aaPredicted RBP10.93□□□□□ -0.66
HLA-DMA-207ENST00000475627 PRDM11Q9NQV5 511 aa10.93□□□□□ -0.66
HLA-DMA-207ENST00000475627 NFAT5O94916 1531 aa10.93□□□□□ -0.66
HLA-DMA-207ENST00000475627 SPDYE2BA6NHP3 402 aa10.92□□□□□ -0.66
HLA-DMA-207ENST00000475627 SPDYE6P0CI01 402 aa10.92□□□□□ -0.66
HLA-DMA-207ENST00000475627 SPDYE2Q495Y8 402 aa10.92□□□□□ -0.66
HLA-DMA-207ENST00000475627 NUDCQ9Y266 331 aa10.92□□□□□ -0.66
HLA-DMA-207ENST00000475627 ABCA3Q99758 1704 aa10.92□□□□□ -0.66
HLA-DMA-207ENST00000475627 CCER2I3L3R5 266 aa10.91□□□□□ -0.66
HLA-DMA-207ENST00000475627 PPM1GO15355 546 aaPredicted RBP10.91□□□□□ -0.66
HLA-DMA-207ENST00000475627 PPP2R1AP30153 589 aa10.91□□□□□ -0.66
HLA-DMA-207ENST00000475627 MEX3CQ5U5Q3 659 aaKnown RBP10.91□□□□□ -0.66
HLA-DMA-207ENST00000475627 CRYBG1Q9Y4K1 1723 aa10.91□□□□□ -0.66
HLA-DMA-207ENST00000475627 MAP3K19Q56UN5 1328 aa10.9□□□□□ -0.66
HLA-DMA-207ENST00000475627 MARF1Q9Y4F3 1742 aaKnown RBP10.9□□□□□ -0.66
HLA-DMA-207ENST00000475627 ZBTB7CA1YPR0 619 aa10.9□□□□□ -0.66
HLA-DMA-207ENST00000475627 ARHGEF25Q86VW2 580 aa10.9□□□□□ -0.66
HLA-DMA-207ENST00000475627 ZRANB1Q9UGI0 708 aa10.9□□□□□ -0.66
HLA-DMA-207ENST00000475627 KIAA0232Q92628 1395 aa10.9□□□□□ -0.67
HLA-DMA-207ENST00000475627 ZMYND10O75800 440 aa10.89□□□□□ -0.67
HLA-DMA-207ENST00000475627 MTHFSP49914 203 aa10.89□□□□□ -0.67
HLA-DMA-207ENST00000475627 NUBP1P53384 320 aa10.89□□□□□ -0.67
HLA-DMA-207ENST00000475627 ZC3H6P61129 1189 aaKnown RBP10.89□□□□□ -0.67
HLA-DMA-207ENST00000475627 BCL11BQ9C0K0 894 aaPredicted RBP10.89□□□□□ -0.67
HLA-DMA-207ENST00000475627 C1orf115Q9H7X2 142 aa10.89□□□□□ -0.67
HLA-DMA-207ENST00000475627 POLKQ9UBT6 870 aa10.89□□□□□ -0.67
HLA-DMA-207ENST00000475627 LTN1O94822 1766 aa10.89□□□□□ -0.67
HLA-DMA-207ENST00000475627 COL14A1Q05707 1796 aaKnown RBP10.89□□□□□ -0.67
HLA-DMA-207ENST00000475627 INSRP06213 1382 aa10.89□□□□□ -0.67
HLA-DMA-207ENST00000475627 NUTM2BA6NNL0 878 aaPredicted RBP10.88□□□□□ -0.67
HLA-DMA-207ENST00000475627 NUTM2EB1AL46 878 aaPredicted RBP10.88□□□□□ -0.67
HLA-DMA-207ENST00000475627 NEFMP07197 916 aa10.88□□□□□ -0.67
HLA-DMA-207ENST00000475627 RRS1Q15050 365 aaKnown RBP10.88□□□□□ -0.67
HLA-DMA-207ENST00000475627 WDR43Q15061 677 aaKnown RBP eCLIP10.88□□□□□ -0.67
HLA-DMA-207ENST00000475627 NUTM2AQ8IVF1 878 aaPredicted RBP10.88□□□□□ -0.67
HLA-DMA-207ENST00000475627 CABLES1Q8TDN4 633 aa10.88□□□□□ -0.67
HLA-DMA-207ENST00000475627 IP6K1Q92551 441 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms