RNA–Protein interactions for RNA: ENST00000475491.1

KCNIP3-206, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best)

Gene KCNIP3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-206ENST00000475491 EDC4Q6P2E9 1401 aaKnown RBP14.69□□□□□ -0.06
KCNIP3-206ENST00000475491 A0A0G2JS52 829 aa14.69□□□□□ -0.06
KCNIP3-206ENST00000475491 EYA1Q99502 592 aa14.69□□□□□ -0.06
KCNIP3-206ENST00000475491 GLIPR1L2Q4G1C9 344 aa14.68□□□□□ -0.06
KCNIP3-206ENST00000475491 FAM135BQ49AJ0 1406 aa14.67□□□□□ -0.06
KCNIP3-206ENST00000475491 TMEM94Q12767 1356 aa14.67□□□□□ -0.06
KCNIP3-206ENST00000475491 CSB-PGBD3P0DP91 1061 aa14.67□□□□□ -0.06
KCNIP3-206ENST00000475491 FTSJ3Q8IY81 847 aaKnown RBP14.67□□□□□ -0.06
KCNIP3-206ENST00000475491 CPSF1Q10570 1443 aaKnown RBP14.67□□□□□ -0.06
KCNIP3-206ENST00000475491 USP6P35125 1406 aa14.66□□□□□ -0.06
KCNIP3-206ENST00000475491 NINLQ9Y2I6 1382 aa14.66□□□□□ -0.06
KCNIP3-206ENST00000475491 FCHSD2O94868 740 aa14.66□□□□□ -0.06
KCNIP3-206ENST00000475491 SSH1Q8WYL5 1049 aa14.66□□□□□ -0.06
KCNIP3-206ENST00000475491 MYH16Q9H6N6 1097 aa14.65□□□□□ -0.06
KCNIP3-206ENST00000475491 C1orf115Q9H7X2 142 aa14.65□□□□□ -0.06
KCNIP3-206ENST00000475491 NSD2O96028 1365 aa14.65□□□□□ -0.06
KCNIP3-206ENST00000475491 RARSP54136 660 aaKnown RBP14.65□□□□□ -0.06
KCNIP3-206ENST00000475491 ITPRIPQ8IWB1 547 aa14.65□□□□□ -0.06
KCNIP3-206ENST00000475491 NFE2L2Q16236 605 aa14.64□□□□□ -0.07
KCNIP3-206ENST00000475491 MTHFSDQ2M296 383 aaKnown RBP14.64□□□□□ -0.07
KCNIP3-206ENST00000475491 RNF123Q5XPI4 1314 aa14.64□□□□□ -0.07
KCNIP3-206ENST00000475491 RGPD8O14715 1765 aaPredicted RBP14.64□□□□□ -0.07
KCNIP3-206ENST00000475491 SIRT1Q96EB6 747 aa14.64□□□□□ -0.07
KCNIP3-206ENST00000475491 NLRP2Q9NX02 1062 aa14.64□□□□□ -0.07
KCNIP3-206ENST00000475491 NOB1Q9ULX3 412 aaKnown RBP14.64□□□□□ -0.07
KCNIP3-206ENST00000475491 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.63□□□□□ -0.07
KCNIP3-206ENST00000475491 C8orf58Q8NAV2 365 aa14.63□□□□□ -0.07
KCNIP3-206ENST00000475491 C19orf44Q9H6X5 657 aa14.63□□□□□ -0.07
KCNIP3-206ENST00000475491 RTF1Q92541 710 aaKnown RBP14.63□□□□□ -0.07
KCNIP3-206ENST00000475491 MBIPQ9NS73 344 aa14.63□□□□□ -0.07
KCNIP3-206ENST00000475491 ARHGAP23Q9P227 1491 aa14.63□□□□□ -0.07
KCNIP3-206ENST00000475491 HOXC9P31274 260 aa14.62□□□□□ -0.07
KCNIP3-206ENST00000475491 AXIN2Q9Y2T1 843 aa14.62□□□□□ -0.07
KCNIP3-206ENST00000475491 APBB1O00213 710 aa14.62□□□□□ -0.07
KCNIP3-206ENST00000475491 GCP02774 474 aa14.62□□□□□ -0.07
KCNIP3-206ENST00000475491 PIP4K2BP78356 416 aa14.62□□□□□ -0.07
KCNIP3-206ENST00000475491 NBPF6Q5VWK0 638 aa14.62□□□□□ -0.07
KCNIP3-206ENST00000475491 NBPF4Q96M43 638 aa14.62□□□□□ -0.07
KCNIP3-206ENST00000475491 ANP32AP39687 249 aaKnown RBP14.61□□□□□ -0.07
KCNIP3-206ENST00000475491 STRN4Q9NRL3 753 aa14.61□□□□□ -0.07
KCNIP3-206ENST00000475491 SETD1AO15047 1707 aaKnown RBP14.61□□□□□ -0.07
KCNIP3-206ENST00000475491 TECPR2O15040 1411 aa14.61□□□□□ -0.07
KCNIP3-206ENST00000475491 SLC4A3P48751 1232 aa14.61□□□□□ -0.07
KCNIP3-206ENST00000475491 MPRIPQ6WCQ1 1025 aa14.61□□□□□ -0.07
KCNIP3-206ENST00000475491 MAP2P11137 1827 aaKnown RBP14.61□□□□□ -0.07
KCNIP3-206ENST00000475491 EIF2S2P20042 333 aaKnown RBP14.6□□□□□ -0.07
KCNIP3-206ENST00000475491 MED14O60244 1454 aa14.6□□□□□ -0.07
KCNIP3-206ENST00000475491 SLIT1O75093 1534 aa14.6□□□□□ -0.07
KCNIP3-206ENST00000475491 DLC1Q96QB1 1528 aa14.6□□□□□ -0.07
KCNIP3-206ENST00000475491 ANXA1P04083 346 aa14.59□□□□□ -0.07
KCNIP3-206ENST00000475491 SLC4A10Q6U841 1118 aa14.59□□□□□ -0.07
KCNIP3-206ENST00000475491 DIP2AQ14689 1571 aa14.59□□□□□ -0.07
KCNIP3-206ENST00000475491 WDR63Q8IWG1 891 aa14.59□□□□□ -0.07
KCNIP3-206ENST00000475491 IGHDP01880 384 aa14.58□□□□□ -0.08
KCNIP3-206ENST00000475491 PDE4AP27815 886 aa14.58□□□□□ -0.08
KCNIP3-206ENST00000475491 KAT6BQ8WYB5 2073 aa14.58□□□□□ -0.08
KCNIP3-206ENST00000475491 TSPYL4Q9UJ04 414 aa14.57□□□□□ -0.08
KCNIP3-206ENST00000475491 NOP58Q9Y2X3 529 aaKnown RBP14.57□□□□□ -0.08
KCNIP3-206ENST00000475491 TWISTNBQ3B726 338 aaPredicted RBP14.57□□□□□ -0.08
KCNIP3-206ENST00000475491 TRMT2AQ8IZ69 625 aaKnown RBP14.57□□□□□ -0.08
KCNIP3-206ENST00000475491 LGR6Q9HBX8 967 aa14.57□□□□□ -0.08
KCNIP3-206ENST00000475491 PNNQ9H307 717 aaKnown RBP14.56□□□□□ -0.08
KCNIP3-206ENST00000475491 TRIM27P14373 513 aa14.56□□□□□ -0.08
KCNIP3-206ENST00000475491 INSRP06213 1382 aa14.56□□□□□ -0.08
KCNIP3-206ENST00000475491 NGEFQ8N5V2 710 aa14.56□□□□□ -0.08
KCNIP3-206ENST00000475491 PIP4K2AP48426 406 aaPredicted RBP14.55□□□□□ -0.08
KCNIP3-206ENST00000475491 F6X3S4 739 aa14.55□□□□□ -0.08
KCNIP3-206ENST00000475491 TMEM57Q8N5G2 664 aa14.55□□□□□ -0.08
KCNIP3-206ENST00000475491 ANKRD24Q8TF21 1146 aa14.55□□□□□ -0.08
KCNIP3-206ENST00000475491 CDC42BPGQ6DT37 1551 aa14.55□□□□□ -0.08
KCNIP3-206ENST00000475491 KCNQ3O43525 872 aa14.54□□□□□ -0.08
KCNIP3-206ENST00000475491 TTC21AQ8NDW8 1320 aa14.54□□□□□ -0.08
KCNIP3-206ENST00000475491 ZKSCAN2Q63HK3 967 aa14.54□□□□□ -0.08
KCNIP3-206ENST00000475491 PCDHB15Q9Y5E8 787 aa14.54□□□□□ -0.08
KCNIP3-206ENST00000475491 PNPLA6Q8IY17 1366 aa14.53□□□□□ -0.08
KCNIP3-206ENST00000475491 NUTM2BA6NNL0 878 aaPredicted RBP14.53□□□□□ -0.08
KCNIP3-206ENST00000475491 NUTM2EB1AL46 878 aaPredicted RBP14.53□□□□□ -0.08
KCNIP3-206ENST00000475491 NUTM2AQ8IVF1 878 aaPredicted RBP14.53□□□□□ -0.08
KCNIP3-206ENST00000475491 DZIP1LQ8IYY4 767 aaKnown RBP14.53□□□□□ -0.08
KCNIP3-206ENST00000475491 LRRC7Q96NW7 1537 aa14.53□□□□□ -0.08
KCNIP3-206ENST00000475491 ZNF530Q6P9A1 599 aaPredicted RBP14.53□□□□□ -0.08
KCNIP3-206ENST00000475491 ZBTB47Q9UFB7 747 aaPredicted RBP14.53□□□□□ -0.08
KCNIP3-206ENST00000475491 SHPRHQ149N8 1683 aa14.52□□□□□ -0.08
KCNIP3-206ENST00000475491 PTCH1Q13635 1447 aa14.52□□□□□ -0.08
KCNIP3-206ENST00000475491 FLT4P35916 1363 aa14.52□□□□□ -0.08
KCNIP3-206ENST00000475491 COL3A1P02461 1466 aaPredicted RBP14.52□□□□□ -0.08
KCNIP3-206ENST00000475491 ADAMTSL3P82987 1691 aa14.52□□□□□ -0.09
KCNIP3-206ENST00000475491 VSIG10Q8N0Z9 540 aa14.52□□□□□ -0.09
KCNIP3-206ENST00000475491 ADAMTS2O95450 1211 aa14.52□□□□□ -0.09
KCNIP3-206ENST00000475491 PRDM11Q9NQV5 511 aa14.52□□□□□ -0.09
KCNIP3-206ENST00000475491 SLAIN2Q9P270 581 aa14.52□□□□□ -0.09
KCNIP3-206ENST00000475491 GNAI1P63096 354 aa14.51□□□□□ -0.09
KCNIP3-206ENST00000475491 SLC39A6Q13433 755 aa14.51□□□□□ -0.09
KCNIP3-206ENST00000475491 CADPS2Q86UW7 1296 aa14.51□□□□□ -0.09
KCNIP3-206ENST00000475491 PHF23Q9BUL5 403 aaPredicted RBP14.51□□□□□ -0.09
KCNIP3-206ENST00000475491 OVOS2A0A0J9YW53 1432 aa14.51□□□□□ -0.09
KCNIP3-206ENST00000475491 OVOS2Q6IE36 1432 aa14.51□□□□□ -0.09
KCNIP3-206ENST00000475491 ADGRL3Q9HAR2 1447 aa14.51□□□□□ -0.09
KCNIP3-206ENST00000475491 VAMP4O75379 141 aa14.51□□□□□ -0.09
KCNIP3-206ENST00000475491 SLC4A2P04920 1241 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms