RNA–Protein interactions for RNA: ENST00000474612.1

NOTCH4-204, Transcript of notch 4, humanhuman

TSL 5

Gene NOTCH4, Length 5,267 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-204ENST00000474612 FBXO31Q5XUX0 539 aaPredicted RBP21.55■■□□□ 1.04
NOTCH4-204ENST00000474612 NAIPQ13075 1403 aa21.54■■□□□ 1.04
NOTCH4-204ENST00000474612 CEP126Q9P2H0 1117 aa21.54■■□□□ 1.04
NOTCH4-204ENST00000474612 FOSBP53539 338 aa21.54■■□□□ 1.04
NOTCH4-204ENST00000474612 LRRCC1Q9C099 1032 aa21.54■■□□□ 1.04
NOTCH4-204ENST00000474612 FANCAO15360 1455 aa21.53■■□□□ 1.04
NOTCH4-204ENST00000474612 FOXO3O43524 673 aa21.53■■□□□ 1.04
NOTCH4-204ENST00000474612 RRP12Q5JTH9 1297 aaKnown RBP21.53■■□□□ 1.04
NOTCH4-204ENST00000474612 CCDC70Q6NSX1 233 aa21.52■■□□□ 1.04
NOTCH4-204ENST00000474612 SASS6Q6UVJ0 657 aa21.52■■□□□ 1.04
NOTCH4-204ENST00000474612 IGHMBP2P38935 993 aaKnown RBP21.52■■□□□ 1.04
NOTCH4-204ENST00000474612 ATF7IPQ6VMQ6 1270 aa21.52■■□□□ 1.04
NOTCH4-204ENST00000474612 SIL1Q9H173 461 aa21.52■■□□□ 1.04
NOTCH4-204ENST00000474612 WASLO00401 505 aaPredicted RBP21.51■■□□□ 1.03
NOTCH4-204ENST00000474612 NGLY1Q96IV0 654 aa21.51■■□□□ 1.03
NOTCH4-204ENST00000474612 ADAMTS2O95450 1211 aa21.51■■□□□ 1.03
NOTCH4-204ENST00000474612 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.51■■□□□ 1.03
NOTCH4-204ENST00000474612 MCM2P49736 904 aa21.51■■□□□ 1.03
NOTCH4-204ENST00000474612 C1orf115Q9H7X2 142 aa21.51■■□□□ 1.03
NOTCH4-204ENST00000474612 URB2Q14146 1524 aaKnown RBP21.5■■□□□ 1.03
NOTCH4-204ENST00000474612 ABCC5O15440 1437 aa21.5■■□□□ 1.03
NOTCH4-204ENST00000474612 RBM5P52756 815 aaKnown RBP eCLIP21.5■■□□□ 1.03
NOTCH4-204ENST00000474612 PDCP20941 246 aa21.49■■□□□ 1.03
NOTCH4-204ENST00000474612 CADPS2Q86UW7 1296 aa21.49■■□□□ 1.03
NOTCH4-204ENST00000474612 BICDL1Q6ZP65 573 aa21.49■■□□□ 1.03
NOTCH4-204ENST00000474612 ZPR1O75312 459 aa21.49■■□□□ 1.03
NOTCH4-204ENST00000474612 PCF11O94913 1555 aaKnown RBP21.47■■□□□ 1.03
NOTCH4-204ENST00000474612 ATP2B2Q01814 1243 aa21.47■■□□□ 1.03
NOTCH4-204ENST00000474612 SRGAP3O43295 1099 aa21.47■■□□□ 1.03
NOTCH4-204ENST00000474612 PDZRN3Q9UPQ7 1066 aa21.47■■□□□ 1.03
NOTCH4-204ENST00000474612 TMPOP42166 694 aaKnown RBP21.47■■□□□ 1.03
NOTCH4-204ENST00000474612 DHX29Q7Z478 1369 aaKnown RBP21.47■■□□□ 1.03
NOTCH4-204ENST00000474612 ZNF608Q9ULD9 1512 aaPredicted RBP21.46■■□□□ 1.03
NOTCH4-204ENST00000474612 PTCD1O75127 700 aaKnown RBP21.46■■□□□ 1.03
NOTCH4-204ENST00000474612 KRT28Q7Z3Y7 464 aa21.45■■□□□ 1.02
NOTCH4-204ENST00000474612 TEX14Q8IWB6 1497 aa21.45■■□□□ 1.02
NOTCH4-204ENST00000474612 EXOC5O00471 708 aa21.45■■□□□ 1.02
NOTCH4-204ENST00000474612 OLFM4Q6UX06 510 aa21.44■■□□□ 1.02
NOTCH4-204ENST00000474612 TXLNAP40222 546 aa21.44■■□□□ 1.02
NOTCH4-204ENST00000474612 NEK4P51957 841 aa21.44■■□□□ 1.02
NOTCH4-204ENST00000474612 BCAR3O75815 825 aa21.44■■□□□ 1.02
NOTCH4-204ENST00000474612 AACSQ86V21 672 aa21.44■■□□□ 1.02
NOTCH4-204ENST00000474612 TMOD2Q9NZR1 351 aa21.44■■□□□ 1.02
NOTCH4-204ENST00000474612 TAF7Q15545 349 aaPredicted RBP21.44■■□□□ 1.02
NOTCH4-204ENST00000474612 LARP1Q6PKG0 1096 aaKnown RBP21.44■■□□□ 1.02
NOTCH4-204ENST00000474612 NME9Q86XW9 330 aa21.44■■□□□ 1.02
NOTCH4-204ENST00000474612 CDK5RAP3Q96JB5 506 aa21.44■■□□□ 1.02
NOTCH4-204ENST00000474612 SDF4Q9BRK5 362 aa21.44■■□□□ 1.02
NOTCH4-204ENST00000474612 TNRQ92752 1358 aa21.44■■□□□ 1.02
NOTCH4-204ENST00000474612 FAM135AQ9P2D6 1515 aa21.43■■□□□ 1.02
NOTCH4-204ENST00000474612 FKBP4Q02790 459 aaKnown RBP eCLIP21.43■■□□□ 1.02
NOTCH4-204ENST00000474612 TRIM22Q8IYM9 498 aa21.43■■□□□ 1.02
NOTCH4-204ENST00000474612 MVPQ14764 893 aaKnown RBP21.43■■□□□ 1.02
NOTCH4-204ENST00000474612 WWC2Q6AWC2 1192 aa21.43■■□□□ 1.02
NOTCH4-204ENST00000474612 RPAP2Q8IXW5 612 aaPredicted RBP21.43■■□□□ 1.02
NOTCH4-204ENST00000474612 CCAR2Q8N163 923 aaKnown RBP21.43■■□□□ 1.02
NOTCH4-204ENST00000474612 RABEP1Q15276 862 aa21.42■■□□□ 1.02
NOTCH4-204ENST00000474612 ANKRD1Q15327 319 aa21.42■■□□□ 1.02
NOTCH4-204ENST00000474612 NAT10Q9H0A0 1025 aaKnown RBP21.42■■□□□ 1.02
NOTCH4-204ENST00000474612 PTPN23Q9H3S7 1636 aa21.42■■□□□ 1.02
NOTCH4-204ENST00000474612 ADGRF5Q8IZF2 1346 aa21.42■■□□□ 1.02
NOTCH4-204ENST00000474612 CTNNA3Q9UI47 895 aa21.42■■□□□ 1.02
NOTCH4-204ENST00000474612 HSP90AB3PQ58FF7 597 aa21.42■■□□□ 1.02
NOTCH4-204ENST00000474612 ZSCAN29Q8IWY8 852 aaPredicted RBP21.42■■□□□ 1.02
NOTCH4-204ENST00000474612 RAI14Q9P0K7 980 aa21.42■■□□□ 1.02
NOTCH4-204ENST00000474612 EPS15P42566 896 aa21.42■■□□□ 1.02
NOTCH4-204ENST00000474612 DUSP27Q5VZP5 1158 aa21.42■■□□□ 1.02
NOTCH4-204ENST00000474612 CYP46A1Q9Y6A2 500 aa21.41■■□□□ 1.02
NOTCH4-204ENST00000474612 ATP2B1P20020 1258 aa21.41■■□□□ 1.02
NOTCH4-204ENST00000474612 LRP2BPQ9P2M1 347 aa21.4■■□□□ 1.02
NOTCH4-204ENST00000474612 NCOA1Q15788 1441 aa21.4■■□□□ 1.02
NOTCH4-204ENST00000474612 TMEM132AQ24JP5 1023 aa21.4■■□□□ 1.02
NOTCH4-204ENST00000474612 CT47A1Q5JQC4 288 aaPredicted RBP21.4■■□□□ 1.02
NOTCH4-204ENST00000474612 ZNF396Q96N95 335 aaPredicted RBP21.39■■□□□ 1.02
NOTCH4-204ENST00000474612 AKAP2Q9Y2D5 859 aa21.39■■□□□ 1.02
NOTCH4-204ENST00000474612 CCDC69A6NI79 296 aa21.39■■□□□ 1.01
NOTCH4-204ENST00000474612 MPRIPQ6WCQ1 1025 aa21.39■■□□□ 1.01
NOTCH4-204ENST00000474612 IFT57Q9NWB7 429 aa21.39■■□□□ 1.01
NOTCH4-204ENST00000474612 MAP3K1Q13233 1512 aa21.39■■□□□ 1.01
NOTCH4-204ENST00000474612 SOGA3Q5TF21 947 aa21.39■■□□□ 1.01
NOTCH4-204ENST00000474612 KRI1Q8N9T8 703 aaKnown RBP21.39■■□□□ 1.01
NOTCH4-204ENST00000474612 ABCC11Q96J66 1382 aa21.38■■□□□ 1.01
NOTCH4-204ENST00000474612 KDM4AO75164 1064 aa21.38■■□□□ 1.01
NOTCH4-204ENST00000474612 OFD1O75665 1012 aa21.38■■□□□ 1.01
NOTCH4-204ENST00000474612 MCM10Q7L590 875 aa21.38■■□□□ 1.01
NOTCH4-204ENST00000474612 TOM1O60784 492 aa21.38■■□□□ 1.01
NOTCH4-204ENST00000474612 TDO2P48775 406 aa21.38■■□□□ 1.01
NOTCH4-204ENST00000474612 MSH6P52701 1360 aa21.38■■□□□ 1.01
NOTCH4-204ENST00000474612 METTL24Q5JXM2 366 aa21.37■■□□□ 1.01
NOTCH4-204ENST00000474612 JMYQ8N9B5 988 aa21.37■■□□□ 1.01
NOTCH4-204ENST00000474612 C14orf93Q9H972 538 aaKnown RBP21.37■■□□□ 1.01
NOTCH4-204ENST00000474612 TTC21BQ7Z4L5 1316 aa21.37■■□□□ 1.01
NOTCH4-204ENST00000474612 TEX13AQ9BXU3 409 aaPredicted RBP21.37■■□□□ 1.01
NOTCH4-204ENST00000474612 ODF2Q5BJF6 829 aa21.36■■□□□ 1.01
NOTCH4-204ENST00000474612 NOS1P29475 1434 aa21.36■■□□□ 1.01
NOTCH4-204ENST00000474612 IFIT1P09914 478 aaKnown RBP21.36■■□□□ 1.01
NOTCH4-204ENST00000474612 USHBP1Q8N6Y0 703 aa21.36■■□□□ 1.01
NOTCH4-204ENST00000474612 CAVIN4Q5BKX8 364 aa21.36■■□□□ 1.01
NOTCH4-204ENST00000474612 KRT18P05783 430 aaKnown RBP21.35■■□□□ 1.01
NOTCH4-204ENST00000474612 FMNL2Q96PY5 1086 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms