RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 FOXO3O43524 673 aa23.49■■□□□ 1.35
VARS2-206ENST00000473916 PSME1Q06323 249 aa23.49■■□□□ 1.35
VARS2-206ENST00000473916 TSR2Q969E8 191 aaKnown RBP23.49■■□□□ 1.35
VARS2-206ENST00000473916 C1orf167Q5SNV9 1468 aa23.48■■□□□ 1.35
VARS2-206ENST00000473916 LTN1O94822 1766 aa23.47■■□□□ 1.35
VARS2-206ENST00000473916 C19orf44Q9H6X5 657 aa23.47■■□□□ 1.35
VARS2-206ENST00000473916 SBNO1A3KN83 1393 aa23.47■■□□□ 1.35
VARS2-206ENST00000473916 XIRP1Q702N8 1843 aaKnown RBP23.47■■□□□ 1.35
VARS2-206ENST00000473916 FLT4P35916 1363 aa23.46■■□□□ 1.35
VARS2-206ENST00000473916 SULT6B1Q6IMI4 303 aa23.46■■□□□ 1.35
VARS2-206ENST00000473916 CRBNQ96SW2 442 aa23.46■■□□□ 1.35
VARS2-206ENST00000473916 NFE2L2Q16236 605 aa23.45■■□□□ 1.35
VARS2-206ENST00000473916 PELP1Q8IZL8 1130 aaKnown RBP23.45■■□□□ 1.35
VARS2-206ENST00000473916 AMPHP49418 695 aa23.45■■□□□ 1.34
VARS2-206ENST00000473916 FANCIQ9NVI1 1328 aa23.45■■□□□ 1.34
VARS2-206ENST00000473916 TRPM3Q9HCF6 1732 aaPredicted RBP23.45■■□□□ 1.34
VARS2-206ENST00000473916 THUMPD2Q9BTF0 503 aaKnown RBP23.44■■□□□ 1.34
VARS2-206ENST00000473916 MST1RQ04912 1400 aa23.43■■□□□ 1.34
VARS2-206ENST00000473916 NEFMP07197 916 aa23.43■■□□□ 1.34
VARS2-206ENST00000473916 CCDC136Q96JN2 1154 aa23.43■■□□□ 1.34
VARS2-206ENST00000473916 MYH16Q9H6N6 1097 aa23.43■■□□□ 1.34
VARS2-206ENST00000473916 NFAT5O94916 1531 aa23.43■■□□□ 1.34
VARS2-206ENST00000473916 PLEKHG5O94827 1062 aa23.42■■□□□ 1.34
VARS2-206ENST00000473916 KIF1AQ12756 1690 aa23.42■■□□□ 1.34
VARS2-206ENST00000473916 HOXC9P31274 260 aa23.4■■□□□ 1.34
VARS2-206ENST00000473916 ATF3P18847 181 aa23.39■■□□□ 1.34
VARS2-206ENST00000473916 DDX17Q92841 729 aaKnown RBP23.39■■□□□ 1.34
VARS2-206ENST00000473916 FAM83GA6ND36 823 aa23.38■■□□□ 1.33
VARS2-206ENST00000473916 RARSP54136 660 aaKnown RBP23.38■■□□□ 1.33
VARS2-206ENST00000473916 BCL2L13Q9BXK5 485 aa23.38■■□□□ 1.33
VARS2-206ENST00000473916 EXOSC9Q06265 439 aaKnown RBP23.38■■□□□ 1.33
VARS2-206ENST00000473916 IL16Q14005 1332 aa23.37■■□□□ 1.33
VARS2-206ENST00000473916 ARHGEF10O15013 1369 aa23.37■■□□□ 1.33
VARS2-206ENST00000473916 EYA1Q99502 592 aa23.37■■□□□ 1.33
VARS2-206ENST00000473916 TSHZ2Q9NRE2 1034 aa23.37■■□□□ 1.33
VARS2-206ENST00000473916 LMOD2Q6P5Q4 547 aa23.36■■□□□ 1.33
VARS2-206ENST00000473916 KRT28Q7Z3Y7 464 aa23.36■■□□□ 1.33
VARS2-206ENST00000473916 LTV1Q96GA3 475 aaPredicted RBP23.36■■□□□ 1.33
VARS2-206ENST00000473916 DCCP43146 1447 aa23.36■■□□□ 1.33
VARS2-206ENST00000473916 ZNF335Q9H4Z2 1342 aaPredicted RBP23.36■■□□□ 1.33
VARS2-206ENST00000473916 DCTN1Q14203 1278 aa23.35■■□□□ 1.33
VARS2-206ENST00000473916 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.35■■□□□ 1.33
VARS2-206ENST00000473916 LAS1LQ9Y4W2 734 aaKnown RBP23.35■■□□□ 1.33
VARS2-206ENST00000473916 NCOA3Q9Y6Q9 1424 aa23.34■■□□□ 1.33
VARS2-206ENST00000473916 IGSF1Q8N6C5 1336 aa23.34■■□□□ 1.33
VARS2-206ENST00000473916 ZBTB7CA1YPR0 619 aa23.33■■□□□ 1.33
VARS2-206ENST00000473916 ALS2Q96Q42 1657 aa23.33■■□□□ 1.33
VARS2-206ENST00000473916 KIF24Q5T7B8 1368 aa23.32■■□□□ 1.32
VARS2-206ENST00000473916 RGPD2P0DJD1 1756 aa23.32■■□□□ 1.32
VARS2-206ENST00000473916 FRAT1Q92837 279 aaPredicted RBP23.32■■□□□ 1.32
VARS2-206ENST00000473916 SLIT3O75094 1523 aa23.32■■□□□ 1.32
VARS2-206ENST00000473916 KDRP35968 1356 aa23.32■■□□□ 1.32
VARS2-206ENST00000473916 TNNQ9UQP3 1299 aa23.32■■□□□ 1.32
VARS2-206ENST00000473916 MSH6P52701 1360 aa23.31■■□□□ 1.32
VARS2-206ENST00000473916 RTL1A6NKG5 1358 aa23.3■■□□□ 1.32
VARS2-206ENST00000473916 CADPS2Q86UW7 1296 aa23.3■■□□□ 1.32
VARS2-206ENST00000473916 PHRF1Q9P1Y6 1649 aaKnown RBP23.29■■□□□ 1.32
VARS2-206ENST00000473916 PANK1Q8TE04 598 aa23.29■■□□□ 1.32
VARS2-206ENST00000473916 GCP02774 474 aa23.28■■□□□ 1.32
VARS2-206ENST00000473916 CANXP27824 592 aaKnown RBP23.28■■□□□ 1.32
VARS2-206ENST00000473916 USHBP1Q8N6Y0 703 aa23.28■■□□□ 1.32
VARS2-206ENST00000473916 IP6K1Q92551 441 aa23.28■■□□□ 1.32
VARS2-206ENST00000473916 USP19O94966 1318 aa23.27■■□□□ 1.32
VARS2-206ENST00000473916 MTHFSDQ2M296 383 aaKnown RBP23.27■■□□□ 1.32
VARS2-206ENST00000473916 MCM10Q7L590 875 aa23.27■■□□□ 1.32
VARS2-206ENST00000473916 KCNH5Q8NCM2 988 aa23.27■■□□□ 1.32
VARS2-206ENST00000473916 MED1Q15648 1581 aaPredicted RBP23.27■■□□□ 1.32
VARS2-206ENST00000473916 ZNF853P0CG23 659 aa23.26■■□□□ 1.31
VARS2-206ENST00000473916 LMOD3Q0VAK6 560 aa23.26■■□□□ 1.31
VARS2-206ENST00000473916 MBIPQ9NS73 344 aa23.26■■□□□ 1.31
VARS2-206ENST00000473916 RGPD5Q99666 1765 aa23.26■■□□□ 1.31
VARS2-206ENST00000473916 IFT57Q9NWB7 429 aa23.25■■□□□ 1.31
VARS2-206ENST00000473916 RLBP1P12271 317 aa23.25■■□□□ 1.31
VARS2-206ENST00000473916 SSH1Q8WYL5 1049 aa23.25■■□□□ 1.31
VARS2-206ENST00000473916 CT47B1P0C2W7 299 aaPredicted RBP23.23■■□□□ 1.31
VARS2-206ENST00000473916 GNAI1P63096 354 aa23.23■■□□□ 1.31
VARS2-206ENST00000473916 ARHGEF25Q86VW2 580 aa23.23■■□□□ 1.31
VARS2-206ENST00000473916 TSPYL6Q8N831 410 aa23.23■■□□□ 1.31
VARS2-206ENST00000473916 SMC4Q9NTJ3 1288 aa23.23■■□□□ 1.31
VARS2-206ENST00000473916 CALD1Q05682 793 aaKnown RBP23.23■■□□□ 1.31
VARS2-206ENST00000473916 COG6Q9Y2V7 657 aa23.23■■□□□ 1.31
VARS2-206ENST00000473916 PXDNQ92626 1479 aa23.22■■□□□ 1.31
VARS2-206ENST00000473916 PDE3AQ14432 1141 aa23.22■■□□□ 1.31
VARS2-206ENST00000473916 CFAP44Q96MT7 982 aa23.22■■□□□ 1.31
VARS2-206ENST00000473916 NBPF6Q5VWK0 638 aa23.21■■□□□ 1.31
VARS2-206ENST00000473916 LRRC59Q96AG4 307 aaKnown RBP23.21■■□□□ 1.31
VARS2-206ENST00000473916 CLUAP1Q96AJ1 413 aa23.21■■□□□ 1.31
VARS2-206ENST00000473916 NBPF4Q96M43 638 aa23.21■■□□□ 1.31
VARS2-206ENST00000473916 ELL2O00472 640 aaPredicted RBP23.2■■□□□ 1.3
VARS2-206ENST00000473916 BRINP3Q76B58 766 aa23.2■■□□□ 1.3
VARS2-206ENST00000473916 NPHP3Q7Z494 1330 aa23.2■■□□□ 1.3
VARS2-206ENST00000473916 AXIN2Q9Y2T1 843 aa23.2■■□□□ 1.3
VARS2-206ENST00000473916 ZC3H6P61129 1189 aaKnown RBP23.19■■□□□ 1.3
VARS2-206ENST00000473916 CABLES1Q8TDN4 633 aa23.19■■□□□ 1.3
VARS2-206ENST00000473916 C8orf58Q8NAV2 365 aa23.18■■□□□ 1.3
VARS2-206ENST00000473916 CRB1P82279 1406 aa23.18■■□□□ 1.3
VARS2-206ENST00000473916 TNS3Q68CZ2 1445 aa23.18■■□□□ 1.3
VARS2-206ENST00000473916 CRYBG1Q9Y4K1 1723 aa23.17■■□□□ 1.3
VARS2-206ENST00000473916 VAMP4O75379 141 aa23.16■■□□□ 1.3
VARS2-206ENST00000473916 SKAP1Q86WV1 359 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms