RNA–Protein interactions for RNA: ENST00000473470.1

CNOT4-209, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-209ENST00000473470 SEPT12Q8IYM1 358 aa9.42□□□□□ -0.9
CNOT4-209ENST00000473470 MYT1Q01538 1121 aa9.41□□□□□ -0.9
CNOT4-209ENST00000473470 CCDC116Q8IYX3 515 aa9.41□□□□□ -0.9
CNOT4-209ENST00000473470 PCDHB9Q9Y5E1 797 aa9.41□□□□□ -0.9
CNOT4-209ENST00000473470 ABL2P42684 1182 aa9.4□□□□□ -0.9
CNOT4-209ENST00000473470 HPS1Q92902 700 aa9.4□□□□□ -0.9
CNOT4-209ENST00000473470 KCTD15Q96SI1 283 aaPredicted RBP9.4□□□□□ -0.9
CNOT4-209ENST00000473470 GDPD2Q9HCC8 539 aa9.4□□□□□ -0.9
CNOT4-209ENST00000473470 COG6Q9Y2V7 657 aa9.4□□□□□ -0.9
CNOT4-209ENST00000473470 SOX11P35716 441 aa9.39□□□□□ -0.91
CNOT4-209ENST00000473470 EIF4G2P78344 907 aaKnown RBP eCLIP9.39□□□□□ -0.91
CNOT4-209ENST00000473470 PGPEP1Q9NXJ5 209 aa9.39□□□□□ -0.91
CNOT4-209ENST00000473470 EMILIN1Q9Y6C2 1016 aa9.39□□□□□ -0.91
CNOT4-209ENST00000473470 GRM5P41594 1212 aa9.37□□□□□ -0.91
CNOT4-209ENST00000473470 WDR4P57081 412 aaKnown RBP9.37□□□□□ -0.91
CNOT4-209ENST00000473470 INTS6LQ5JSJ4 861 aaKnown RBP9.37□□□□□ -0.91
CNOT4-209ENST00000473470 AAASQ9NRG9 546 aa9.37□□□□□ -0.91
CNOT4-209ENST00000473470 CAPN5O15484 640 aaPredicted RBP9.36□□□□□ -0.91
CNOT4-209ENST00000473470 NR3C2P08235 984 aa9.36□□□□□ -0.91
CNOT4-209ENST00000473470 IRF5Q13568 498 aa9.36□□□□□ -0.91
CNOT4-209ENST00000473470 RNF20Q5VTR2 975 aa9.36□□□□□ -0.91
CNOT4-209ENST00000473470 ESPNB1AK53 854 aa9.35□□□□□ -0.91
CNOT4-209ENST00000473470 ST8SIA5O15466 376 aa9.35□□□□□ -0.91
CNOT4-209ENST00000473470 TIMP2P16035 220 aa9.35□□□□□ -0.91
CNOT4-209ENST00000473470 LCE2BO14633 110 aa9.34□□□□□ -0.91
CNOT4-209ENST00000473470 ZIC2O95409 532 aaPredicted RBP9.34□□□□□ -0.91
CNOT4-209ENST00000473470 PPP1R26Q5T8A7 1209 aaPredicted RBP9.33□□□□□ -0.92
CNOT4-209ENST00000473470 KIFC2Q96AC6 838 aa9.32□□□□□ -0.92
CNOT4-209ENST00000473470 KLF16Q9BXK1 252 aaPredicted RBP9.32□□□□□ -0.92
CNOT4-209ENST00000473470 SENP2Q9HC62 589 aa9.32□□□□□ -0.92
CNOT4-209ENST00000473470 UPP2O95045 317 aa9.31□□□□□ -0.92
CNOT4-209ENST00000473470 VAC14Q08AM6 782 aa9.31□□□□□ -0.92
CNOT4-209ENST00000473470 MEIOBQ8N635 442 aa9.31□□□□□ -0.92
CNOT4-209ENST00000473470 ITPKCQ96DU7 683 aa9.31□□□□□ -0.92
CNOT4-209ENST00000473470 ATP13A2Q9NQ11 1180 aa9.31□□□□□ -0.92
CNOT4-209ENST00000473470 PROSER2Q86WR7 435 aaPredicted RBP9.3□□□□□ -0.92
CNOT4-209ENST00000473470 POM121Q96HA1 1249 aa9.3□□□□□ -0.92
CNOT4-209ENST00000473470 RAB15P59190 212 aa9.29□□□□□ -0.92
CNOT4-209ENST00000473470 SCARF1Q14162 830 aa9.29□□□□□ -0.92
CNOT4-209ENST00000473470 ZFAND3Q9H8U3 227 aa9.29□□□□□ -0.92
CNOT4-209ENST00000473470 SEMA3FQ13275 785 aa9.28□□□□□ -0.92
CNOT4-209ENST00000473470 MRPL14Q6P1L8 145 aaKnown RBP9.28□□□□□ -0.92
CNOT4-209ENST00000473470 A6NJR5 290 aa9.27□□□□□ -0.93
CNOT4-209ENST00000473470 ERVH48-1M5A8F1 160 aa9.27□□□□□ -0.93
CNOT4-209ENST00000473470 SLFNL1Q499Z3 407 aa9.27□□□□□ -0.93
CNOT4-209ENST00000473470 LINC00528Q8N1L1 170 aa9.27□□□□□ -0.93
CNOT4-209ENST00000473470 GIGYF1O75420 1035 aaPredicted RBP9.26□□□□□ -0.93
CNOT4-209ENST00000473470 BMP1P13497 986 aa9.26□□□□□ -0.93
CNOT4-209ENST00000473470 ZNF784Q8NCA9 323 aaPredicted RBP9.26□□□□□ -0.93
CNOT4-209ENST00000473470 TSEN34Q9BSV6 310 aaKnown RBP9.26□□□□□ -0.93
CNOT4-209ENST00000473470 Q6ZVU0 165 aa9.25□□□□□ -0.93
CNOT4-209ENST00000473470 TRIM47Q96LD4 638 aa9.25□□□□□ -0.93
CNOT4-209ENST00000473470 ADH1AP07327 375 aa9.24□□□□□ -0.93
CNOT4-209ENST00000473470 CC2D2BQ6DHV5 1058 aa9.24□□□□□ -0.93
CNOT4-209ENST00000473470 TRIM46Q7Z4K8 759 aa9.24□□□□□ -0.93
CNOT4-209ENST00000473470 RNF135Q8IUD6 432 aa9.24□□□□□ -0.93
CNOT4-209ENST00000473470 CEP126Q9P2H0 1117 aa9.24□□□□□ -0.93
CNOT4-209ENST00000473470 PCDHB11Q9Y5F2 797 aa9.24□□□□□ -0.93
CNOT4-209ENST00000473470 ERVK-9P63128 1117 aa9.23□□□□□ -0.93
CNOT4-209ENST00000473470 CYP2U1Q7Z449 544 aa9.23□□□□□ -0.93
CNOT4-209ENST00000473470 CLUAP1Q96AJ1 413 aa9.23□□□□□ -0.93
CNOT4-209ENST00000473470 ESF1Q9H501 851 aaKnown RBP9.23□□□□□ -0.93
CNOT4-209ENST00000473470 GMPR2Q9P2T1 348 aaKnown RBP9.23□□□□□ -0.93
CNOT4-209ENST00000473470 DOLKQ9UPQ8 538 aa9.23□□□□□ -0.93
CNOT4-209ENST00000473470 MYCP01106 439 aaPredicted RBP9.22□□□□□ -0.93
CNOT4-209ENST00000473470 ZNF787Q6DD87 383 aa9.22□□□□□ -0.93
CNOT4-209ENST00000473470 CYLDQ9NQC7 956 aa9.22□□□□□ -0.93
CNOT4-209ENST00000473470 TMPRSS4Q9NRS4 437 aa9.22□□□□□ -0.93
CNOT4-209ENST00000473470 GTF3C3Q9Y5Q9 886 aa9.22□□□□□ -0.93
CNOT4-209ENST00000473470 C11orf95C9JLR9 678 aaPredicted RBP9.21□□□□□ -0.94
CNOT4-209ENST00000473470 BMP2P12643 396 aa9.21□□□□□ -0.94
CNOT4-209ENST00000473470 MAP7D1Q3KQU3 841 aa9.21□□□□□ -0.94
CNOT4-209ENST00000473470 NFATC2IPQ8NCF5 419 aa9.21□□□□□ -0.94
CNOT4-209ENST00000473470 SIRT1Q96EB6 747 aa9.21□□□□□ -0.94
CNOT4-209ENST00000473470 DACH1Q9UI36 760 aa9.21□□□□□ -0.94
CNOT4-209ENST00000473470 LILRA1O75019 489 aa9.2□□□□□ -0.94
CNOT4-209ENST00000473470 FNBP4Q8N3X1 1017 aaPredicted RBP9.2□□□□□ -0.94
CNOT4-209ENST00000473470 PURBQ96QR8 312 aaKnown RBP9.2□□□□□ -0.94
CNOT4-209ENST00000473470 CBLBQ13191 982 aa9.19□□□□□ -0.94
CNOT4-209ENST00000473470 ZFP42Q96MM3 310 aa9.19□□□□□ -0.94
CNOT4-209ENST00000473470 ALG2Q9H553 416 aa9.19□□□□□ -0.94
CNOT4-209ENST00000473470 SPINT1O43278 529 aa9.18□□□□□ -0.94
CNOT4-209ENST00000473470 C6orf118Q5T5N4 469 aa9.18□□□□□ -0.94
CNOT4-209ENST00000473470 CHIC2Q9UKJ5 165 aa9.18□□□□□ -0.94
CNOT4-209ENST00000473470 ATP5J2-PTCD1G3V325 749 aa9.17□□□□□ -0.94
CNOT4-209ENST00000473470 LZTS3O60299 673 aaPredicted RBP9.17□□□□□ -0.94
CNOT4-209ENST00000473470 PHTF2Q8N3S3 785 aa9.17□□□□□ -0.94
CNOT4-209ENST00000473470 PLPP7Q8NBV4 271 aa9.17□□□□□ -0.94
CNOT4-209ENST00000473470 CCDC85AQ96PX6 553 aaPredicted RBP9.17□□□□□ -0.94
CNOT4-209ENST00000473470 POM121CA8CG34 1229 aa9.16□□□□□ -0.94
CNOT4-209ENST00000473470 USP4Q13107 963 aa9.16□□□□□ -0.94
CNOT4-209ENST00000473470 GLMNQ92990 594 aa9.16□□□□□ -0.94
CNOT4-209ENST00000473470 RELBQ01201 579 aa9.15□□□□□ -0.94
CNOT4-209ENST00000473470 ERICH6Q7L0X2 663 aa9.15□□□□□ -0.94
CNOT4-209ENST00000473470 TRAK2O60296 914 aa9.14□□□□□ -0.95
CNOT4-209ENST00000473470 PTGIRP43119 386 aa9.14□□□□□ -0.95
CNOT4-209ENST00000473470 EML3Q32P44 896 aa9.14□□□□□ -0.95
CNOT4-209ENST00000473470 OXLD1Q5BKU9 147 aa9.14□□□□□ -0.95
CNOT4-209ENST00000473470 SOS2Q07890 1332 aaPredicted RBP9.13□□□□□ -0.95
CNOT4-209ENST00000473470 TTLL8A6PVC2 850 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms