RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 WDR78Q5VTH9 848 aa8.11□□□□□ -1.11
BRCA1-210ENST00000471181 MACROD2A1Z1Q3 448 aa8.11□□□□□ -1.11
BRCA1-210ENST00000471181 E9PSI1 815 aa8.11□□□□□ -1.11
BRCA1-210ENST00000471181 DNA2P51530 1060 aa8.11□□□□□ -1.11
BRCA1-210ENST00000471181 DAAM2Q86T65 1068 aa8.11□□□□□ -1.11
BRCA1-210ENST00000471181 API5Q9BZZ5 524 aaKnown RBP8.11□□□□□ -1.11
BRCA1-210ENST00000471181 TSPYL4Q9UJ04 414 aa8.11□□□□□ -1.11
BRCA1-210ENST00000471181 HOOK3Q86VS8 718 aa8.11□□□□□ -1.11
BRCA1-210ENST00000471181 CRACR2AQ9BSW2 395 aa8.11□□□□□ -1.11
BRCA1-210ENST00000471181 TNMDQ9H2S6 317 aa8.11□□□□□ -1.11
BRCA1-210ENST00000471181 GCOM1H8Y6P7 765 aaPredicted RBP8.1□□□□□ -1.11
BRCA1-210ENST00000471181 MYZAPP0CAP1 466 aa8.1□□□□□ -1.11
BRCA1-210ENST00000471181 LARP1Q6PKG0 1096 aaKnown RBP8.1□□□□□ -1.11
BRCA1-210ENST00000471181 DZIP1LQ8IYY4 767 aaKnown RBP8.1□□□□□ -1.11
BRCA1-210ENST00000471181 CDC45O75419 566 aa8.1□□□□□ -1.11
BRCA1-210ENST00000471181 CA8P35219 290 aa8.1□□□□□ -1.11
BRCA1-210ENST00000471181 RRP1P56182 461 aaKnown RBP8.1□□□□□ -1.11
BRCA1-210ENST00000471181 TRERF1Q96PN7 1200 aa8.1□□□□□ -1.11
BRCA1-210ENST00000471181 CCDC160A6NGH7 325 aa8.1□□□□□ -1.11
BRCA1-210ENST00000471181 ME1P48163 572 aa8.1□□□□□ -1.11
BRCA1-210ENST00000471181 CCDC57Q2TAC2 916 aa8.1□□□□□ -1.11
BRCA1-210ENST00000471181 BMP2KQ9NSY1 1161 aaPredicted RBP8.1□□□□□ -1.11
BRCA1-210ENST00000471181 SSX2IPQ9Y2D8 614 aa8.1□□□□□ -1.11
BRCA1-210ENST00000471181 ARL1P40616 181 aaPredicted RBP8.1□□□□□ -1.11
BRCA1-210ENST00000471181 NLRP13Q86W25 1043 aa8.1□□□□□ -1.11
BRCA1-210ENST00000471181 DRC1Q96MC2 740 aa8.1□□□□□ -1.11
BRCA1-210ENST00000471181 UBTFL1P0CB47 393 aaPredicted RBP8.09□□□□□ -1.11
BRCA1-210ENST00000471181 PSME1Q06323 249 aa8.09□□□□□ -1.11
BRCA1-210ENST00000471181 ZSCAN29Q8IWY8 852 aaPredicted RBP8.09□□□□□ -1.11
BRCA1-210ENST00000471181 JMYQ8N9B5 988 aa8.09□□□□□ -1.11
BRCA1-210ENST00000471181 RAB3IL1Q8TBN0 382 aa8.09□□□□□ -1.11
BRCA1-210ENST00000471181 USP5P45974 858 aa8.09□□□□□ -1.11
BRCA1-210ENST00000471181 KIF6Q6ZMV9 814 aa8.09□□□□□ -1.11
BRCA1-210ENST00000471181 NAP1L3Q99457 506 aaPredicted RBP8.09□□□□□ -1.11
BRCA1-210ENST00000471181 PRDM10Q9NQV6 1147 aa8.09□□□□□ -1.11
BRCA1-210ENST00000471181 CNNM1Q9NRU3 951 aa8.09□□□□□ -1.11
BRCA1-210ENST00000471181 NOL7Q9UMY1 257 aaKnown RBP8.09□□□□□ -1.11
BRCA1-210ENST00000471181 RIPK4P57078 832 aa8.09□□□□□ -1.11
BRCA1-210ENST00000471181 TSNARE1Q96NA8 513 aa8.09□□□□□ -1.11
BRCA1-210ENST00000471181 TRAK2O60296 914 aa8.09□□□□□ -1.11
BRCA1-210ENST00000471181 CTNNA2P26232 953 aa8.09□□□□□ -1.11
BRCA1-210ENST00000471181 TRIM22Q8IYM9 498 aa8.09□□□□□ -1.11
BRCA1-210ENST00000471181 CCDC192P0DO97 292 aa8.08□□□□□ -1.12
BRCA1-210ENST00000471181 TMX1Q9H3N1 280 aa8.08□□□□□ -1.12
BRCA1-210ENST00000471181 PHLDB1Q86UU1 1377 aa8.08□□□□□ -1.12
BRCA1-210ENST00000471181 LIG1P18858 919 aa8.08□□□□□ -1.12
BRCA1-210ENST00000471181 GIGYF2Q6Y7W6 1299 aaKnown RBP8.08□□□□□ -1.12
BRCA1-210ENST00000471181 ZNF397Q8NF99 534 aaPredicted RBP8.08□□□□□ -1.12
BRCA1-210ENST00000471181 FERMT2Q96AC1 680 aa8.08□□□□□ -1.12
BRCA1-210ENST00000471181 ZNF428Q96B54 188 aa8.08□□□□□ -1.12
BRCA1-210ENST00000471181 DDX11Q96FC9 970 aa8.08□□□□□ -1.12
BRCA1-210ENST00000471181 SRRTQ9BXP5 876 aaKnown RBP8.08□□□□□ -1.12
BRCA1-210ENST00000471181 TOP2BQ02880 1626 aa8.08□□□□□ -1.12
BRCA1-210ENST00000471181 LUZP1Q86V48 1076 aa8.08□□□□□ -1.12
BRCA1-210ENST00000471181 RBM42Q9BTD8 480 aaKnown RBP8.08□□□□□ -1.12
BRCA1-210ENST00000471181 ARHGAP29Q52LW3 1261 aa8.08□□□□□ -1.12
BRCA1-210ENST00000471181 C6orf163Q5TEZ5 329 aa8.08□□□□□ -1.12
BRCA1-210ENST00000471181 PPP4R3AQ6IN85 833 aa8.08□□□□□ -1.12
BRCA1-210ENST00000471181 CEP57L1Q8IYX8 460 aa8.08□□□□□ -1.12
BRCA1-210ENST00000471181 GNL3LQ9NVN8 582 aaKnown RBP8.08□□□□□ -1.12
BRCA1-210ENST00000471181 TARBP1Q13395 1621 aaKnown RBP8.08□□□□□ -1.12
BRCA1-210ENST00000471181 ERCC6Q03468 1493 aa8.07□□□□□ -1.12
BRCA1-210ENST00000471181 PAXIP1Q6ZW49 1069 aaPredicted RBP8.07□□□□□ -1.12
BRCA1-210ENST00000471181 NUP155O75694 1391 aa8.07□□□□□ -1.12
BRCA1-210ENST00000471181 FHAD1B1AJZ9 1412 aa8.07□□□□□ -1.12
BRCA1-210ENST00000471181 MBD3O95983 291 aa8.07□□□□□ -1.12
BRCA1-210ENST00000471181 DHX8Q14562 1220 aaKnown RBP8.07□□□□□ -1.12
BRCA1-210ENST00000471181 UBA5Q9GZZ9 404 aa8.07□□□□□ -1.12
BRCA1-210ENST00000471181 DNAJC5BQ9UF47 199 aa8.07□□□□□ -1.12
BRCA1-210ENST00000471181 WDR62O43379 1518 aa8.07□□□□□ -1.12
BRCA1-210ENST00000471181 SPA17Q15506 151 aa8.07□□□□□ -1.12
BRCA1-210ENST00000471181 MICALCLQ6ZW33 695 aa8.07□□□□□ -1.12
BRCA1-210ENST00000471181 ZFP91Q96JP5 570 aaPredicted RBP8.07□□□□□ -1.12
BRCA1-210ENST00000471181 CASQ1P31415 396 aa8.07□□□□□ -1.12
BRCA1-210ENST00000471181 PPP1R14CQ8TAE6 165 aa8.07□□□□□ -1.12
BRCA1-210ENST00000471181 RAPGEF4Q8WZA2 1011 aa8.07□□□□□ -1.12
BRCA1-210ENST00000471181 PANK3Q9H999 370 aa8.07□□□□□ -1.12
BRCA1-210ENST00000471181 WASHC2CQ9Y4E1 1318 aa8.07□□□□□ -1.12
BRCA1-210ENST00000471181 SYNJ1O43426 1573 aa8.07□□□□□ -1.12
BRCA1-210ENST00000471181 MYBBP1AQ9BQG0 1328 aaKnown RBP8.07□□□□□ -1.12
BRCA1-210ENST00000471181 ATP2C2O75185 946 aa8.07□□□□□ -1.12
BRCA1-210ENST00000471181 LMAN1P49257 510 aa8.07□□□□□ -1.12
BRCA1-210ENST00000471181 CCDC158Q5M9N0 1113 aa8.07□□□□□ -1.12
BRCA1-210ENST00000471181 RAI14Q9P0K7 980 aa8.07□□□□□ -1.12
BRCA1-210ENST00000471181 PPP1R12BO60237 982 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-210ENST00000471181 MAP4K4O95819 1239 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-210ENST00000471181 MXRA7P84157 204 aa8.06□□□□□ -1.12
BRCA1-210ENST00000471181 SF3B2Q13435 895 aaKnown RBP8.06□□□□□ -1.12
BRCA1-210ENST00000471181 SEPT6Q14141 434 aa8.06□□□□□ -1.12
BRCA1-210ENST00000471181 KIF15Q9NS87 1388 aa8.06□□□□□ -1.12
BRCA1-210ENST00000471181 MINK1Q8N4C8 1332 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-210ENST00000471181 DIAPH1O60610 1272 aaKnown RBP8.06□□□□□ -1.12
BRCA1-210ENST00000471181 NEK4P51957 841 aa8.06□□□□□ -1.12
BRCA1-210ENST00000471181 TPD52P55327 224 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-210ENST00000471181 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.06□□□□□ -1.12
BRCA1-210ENST00000471181 ZNF354CQ86Y25 554 aa8.06□□□□□ -1.12
BRCA1-210ENST00000471181 CCDC150Q8NCX0 1101 aa8.06□□□□□ -1.12
BRCA1-210ENST00000471181 POLR3GO15318 223 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-210ENST00000471181 PSMC4P43686 418 aa8.06□□□□□ -1.12
BRCA1-210ENST00000471181 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms