RNA–Protein interactions for RNA: ENST00000471161.1

TMEM139-206, Transcript of transmembrane protein 139, humanhuman

TSL 1 (best)

Gene TMEM139, Length 1,724 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM139-206ENST00000471161 NCBP3Q53F19 620 aaKnown RBP17.18■□□□□ 0.34
TMEM139-206ENST00000471161 RCAN3Q9UKA8 241 aa17.18■□□□□ 0.34
TMEM139-206ENST00000471161 MAPK8IP3Q9UPT6 1336 aa17.18■□□□□ 0.34
TMEM139-206ENST00000471161 PNNQ9H307 717 aaKnown RBP17.18■□□□□ 0.34
TMEM139-206ENST00000471161 FLT4P35916 1363 aa17.18■□□□□ 0.34
TMEM139-206ENST00000471161 NFAT5O94916 1531 aa17.17■□□□□ 0.34
TMEM139-206ENST00000471161 DDX17Q92841 729 aaKnown RBP17.17■□□□□ 0.34
TMEM139-206ENST00000471161 ALS2Q96Q42 1657 aa17.17■□□□□ 0.34
TMEM139-206ENST00000471161 E9PSI1 815 aa17.16■□□□□ 0.34
TMEM139-206ENST00000471161 AMPHP49418 695 aa17.16■□□□□ 0.34
TMEM139-206ENST00000471161 PHACTR3Q96KR7 559 aa17.16■□□□□ 0.34
TMEM139-206ENST00000471161 TRIM35Q9UPQ4 493 aa17.16■□□□□ 0.34
TMEM139-206ENST00000471161 AEBP1Q8IUX7 1158 aa17.15■□□□□ 0.34
TMEM139-206ENST00000471161 WDR63Q8IWG1 891 aa17.15■□□□□ 0.34
TMEM139-206ENST00000471161 SLIT3O75094 1523 aa17.14■□□□□ 0.33
TMEM139-206ENST00000471161 HOXC9P31274 260 aa17.14■□□□□ 0.33
TMEM139-206ENST00000471161 KIF24Q5T7B8 1368 aa17.13■□□□□ 0.33
TMEM139-206ENST00000471161 DLG5Q8TDM6 1919 aa17.13■□□□□ 0.33
TMEM139-206ENST00000471161 RIPK4P57078 832 aa17.13■□□□□ 0.33
TMEM139-206ENST00000471161 SULT6B1Q6IMI4 303 aa17.13■□□□□ 0.33
TMEM139-206ENST00000471161 LMOD2Q6P5Q4 547 aa17.13■□□□□ 0.33
TMEM139-206ENST00000471161 USP19O94966 1318 aa17.11■□□□□ 0.33
TMEM139-206ENST00000471161 PLEKHG5O94827 1062 aa17.11■□□□□ 0.33
TMEM139-206ENST00000471161 RRP1P56182 461 aaKnown RBP17.11■□□□□ 0.33
TMEM139-206ENST00000471161 BRINP3Q76B58 766 aa17.11■□□□□ 0.33
TMEM139-206ENST00000471161 PXDNQ92626 1479 aa17.11■□□□□ 0.33
TMEM139-206ENST00000471161 PHRF1Q9P1Y6 1649 aaKnown RBP17.11■□□□□ 0.33
TMEM139-206ENST00000471161 NPHP3Q7Z494 1330 aa17.11■□□□□ 0.33
TMEM139-206ENST00000471161 NEFMP07197 916 aa17.1■□□□□ 0.33
TMEM139-206ENST00000471161 NFE2L2Q16236 605 aa17.1■□□□□ 0.33
TMEM139-206ENST00000471161 KCNH5Q8NCM2 988 aa17.1■□□□□ 0.33
TMEM139-206ENST00000471161 RTL1A6NKG5 1358 aa17.1■□□□□ 0.33
TMEM139-206ENST00000471161 ARHGEF10O15013 1369 aa17.1■□□□□ 0.33
TMEM139-206ENST00000471161 GCP02774 474 aa17.1■□□□□ 0.33
TMEM139-206ENST00000471161 MED1Q15648 1581 aaPredicted RBP17.09■□□□□ 0.33
TMEM139-206ENST00000471161 EYA1Q99502 592 aa17.09■□□□□ 0.33
TMEM139-206ENST00000471161 IGSF1Q8N6C5 1336 aa17.08■□□□□ 0.33
TMEM139-206ENST00000471161 IP6K1Q92551 441 aa17.08■□□□□ 0.32
TMEM139-206ENST00000471161 SLAIN2Q9P270 581 aa17.08■□□□□ 0.32
TMEM139-206ENST00000471161 ERICH6BQ5W0A0 696 aa17.07■□□□□ 0.32
TMEM139-206ENST00000471161 ARHGEF25Q86VW2 580 aa17.07■□□□□ 0.32
TMEM139-206ENST00000471161 LTV1Q96GA3 475 aaPredicted RBP17.07■□□□□ 0.32
TMEM139-206ENST00000471161 KDRP35968 1356 aa17.07■□□□□ 0.32
TMEM139-206ENST00000471161 TNS3Q68CZ2 1445 aa17.06■□□□□ 0.32
TMEM139-206ENST00000471161 ZBTB7CA1YPR0 619 aa17.06■□□□□ 0.32
TMEM139-206ENST00000471161 RGPD2P0DJD1 1756 aa17.06■□□□□ 0.32
TMEM139-206ENST00000471161 CRYBG1Q9Y4K1 1723 aa17.05■□□□□ 0.32
TMEM139-206ENST00000471161 SPATA31A3Q5VYP0 1347 aa17.05■□□□□ 0.32
TMEM139-206ENST00000471161 PLIN1O60240 522 aa17.04■□□□□ 0.32
TMEM139-206ENST00000471161 RGPD5Q99666 1765 aa17.04■□□□□ 0.32
TMEM139-206ENST00000471161 IL16Q14005 1332 aa17.04■□□□□ 0.32
TMEM139-206ENST00000471161 TSR2Q969E8 191 aaKnown RBP17.04■□□□□ 0.32
TMEM139-206ENST00000471161 THUMPD2Q9BTF0 503 aaKnown RBP17.04■□□□□ 0.32
TMEM139-206ENST00000471161 MYH16Q9H6N6 1097 aa17.04■□□□□ 0.32
TMEM139-206ENST00000471161 FANCIQ9NVI1 1328 aa17.03■□□□□ 0.32
TMEM139-206ENST00000471161 LTBP4Q8N2S1 1624 aa17.02■□□□□ 0.32
TMEM139-206ENST00000471161 FAM83GA6ND36 823 aa17.01■□□□□ 0.31
TMEM139-206ENST00000471161 CABLES1Q8TDN4 633 aa17.01■□□□□ 0.31
TMEM139-206ENST00000471161 SOS2Q07890 1332 aaPredicted RBP17.01■□□□□ 0.31
TMEM139-206ENST00000471161 NHSL1Q5SYE7 1610 aa17.01■□□□□ 0.31
TMEM139-206ENST00000471161 ZC3H6P61129 1189 aaKnown RBP17.01■□□□□ 0.31
TMEM139-206ENST00000471161 USHBP1Q8N6Y0 703 aa17.01■□□□□ 0.31
TMEM139-206ENST00000471161 BCAR3O75815 825 aa17■□□□□ 0.31
TMEM139-206ENST00000471161 PPP4R2Q9NY27 417 aa17■□□□□ 0.31
TMEM139-206ENST00000471161 AXIN2Q9Y2T1 843 aa17■□□□□ 0.31
TMEM139-206ENST00000471161 COL18A1P39060 1754 aa16.99■□□□□ 0.31
TMEM139-206ENST00000471161 DCTN1Q14203 1278 aa16.99■□□□□ 0.31
TMEM139-206ENST00000471161 MTHFSDQ2M296 383 aaKnown RBP16.99■□□□□ 0.31
TMEM139-206ENST00000471161 NBPF6Q5VWK0 638 aa16.99■□□□□ 0.31
TMEM139-206ENST00000471161 NBPF4Q96M43 638 aa16.99■□□□□ 0.31
TMEM139-206ENST00000471161 EXOSC9Q06265 439 aaKnown RBP16.99■□□□□ 0.31
TMEM139-206ENST00000471161 LMOD3Q0VAK6 560 aa16.99■□□□□ 0.31
TMEM139-206ENST00000471161 LRRC59Q96AG4 307 aaKnown RBP16.99■□□□□ 0.31
TMEM139-206ENST00000471161 C20orf194Q5TEA3 1177 aa16.97■□□□□ 0.31
TMEM139-206ENST00000471161 EXOC6Q8TAG9 804 aa16.97■□□□□ 0.31
TMEM139-206ENST00000471161 ZNF853P0CG23 659 aa16.96■□□□□ 0.31
TMEM139-206ENST00000471161 RARSP54136 660 aaKnown RBP16.96■□□□□ 0.31
TMEM139-206ENST00000471161 ANKRD24Q8TF21 1146 aa16.96■□□□□ 0.31
TMEM139-206ENST00000471161 LAS1LQ9Y4W2 734 aaKnown RBP16.96■□□□□ 0.31
TMEM139-206ENST00000471161 CAMTA1Q9Y6Y1 1673 aa16.96■□□□□ 0.31
TMEM139-206ENST00000471161 CALD1Q05682 793 aaKnown RBP16.96■□□□□ 0.3
TMEM139-206ENST00000471161 FBXO41Q8TF61 875 aa16.96■□□□□ 0.3
TMEM139-206ENST00000471161 NCAPD2Q15021 1401 aa16.95■□□□□ 0.3
TMEM139-206ENST00000471161 MCM10Q7L590 875 aa16.95■□□□□ 0.3
TMEM139-206ENST00000471161 IFT57Q9NWB7 429 aa16.95■□□□□ 0.3
TMEM139-206ENST00000471161 ABCA3Q99758 1704 aa16.94■□□□□ 0.3
TMEM139-206ENST00000471161 B4GALNT3Q6L9W6 998 aa16.94■□□□□ 0.3
TMEM139-206ENST00000471161 CRBNQ96SW2 442 aa16.94■□□□□ 0.3
TMEM139-206ENST00000471161 ROBO1Q9Y6N7 1651 aa16.93■□□□□ 0.3
TMEM139-206ENST00000471161 GNAI1P63096 354 aa16.93■□□□□ 0.3
TMEM139-206ENST00000471161 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.93■□□□□ 0.3
TMEM139-206ENST00000471161 GAS2L2Q8NHY3 880 aa16.93■□□□□ 0.3
TMEM139-206ENST00000471161 MBIPQ9NS73 344 aa16.93■□□□□ 0.3
TMEM139-206ENST00000471161 CHRNA2Q15822 529 aa16.93■□□□□ 0.3
TMEM139-206ENST00000471161 CFAP44Q96MT7 982 aa16.93■□□□□ 0.3
TMEM139-206ENST00000471161 BCL2L13Q9BXK5 485 aa16.93■□□□□ 0.3
TMEM139-206ENST00000471161 LMO7Q8WWI1 1683 aa16.92■□□□□ 0.3
TMEM139-206ENST00000471161 KIAA0232Q92628 1395 aa16.92■□□□□ 0.3
TMEM139-206ENST00000471161 ERBB3P21860 1342 aa16.92■□□□□ 0.3
TMEM139-206ENST00000471161 CT47B1P0C2W7 299 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms