RNA–Protein interactions for RNA: ENST00000470668.5

HDAC7-219, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 4,266 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-219ENST00000470668 LARP1BQ659C4 914 aaKnown RBP16.96■□□□□ 0.31
HDAC7-219ENST00000470668 NUP62CLQ9H1M0 184 aa16.96■□□□□ 0.31
HDAC7-219ENST00000470668 CHMP4AQ9BY43 222 aa16.96■□□□□ 0.31
HDAC7-219ENST00000470668 NOLC1Q14978 699 aaKnown RBP eCLIP16.96■□□□□ 0.3
HDAC7-219ENST00000470668 NUTM2GQ5VZR2 741 aa16.96■□□□□ 0.3
HDAC7-219ENST00000470668 LEKR1Q6ZMV7 388 aa16.96■□□□□ 0.3
HDAC7-219ENST00000470668 GAS2L2Q8NHY3 880 aa16.96■□□□□ 0.3
HDAC7-219ENST00000470668 CUL7Q14999 1698 aa16.95■□□□□ 0.3
HDAC7-219ENST00000470668 TPM1P09493 284 aa16.95■□□□□ 0.3
HDAC7-219ENST00000470668 PRAM1Q96QH2 718 aa16.95■□□□□ 0.3
HDAC7-219ENST00000470668 LAMC3Q9Y6N6 1575 aa16.95■□□□□ 0.3
HDAC7-219ENST00000470668 RPRD2Q5VT52 1461 aaKnown RBP16.95■□□□□ 0.3
HDAC7-219ENST00000470668 MAGI1Q96QZ7 1491 aaPredicted RBP16.95■□□□□ 0.3
HDAC7-219ENST00000470668 NAT10Q9H0A0 1025 aaKnown RBP16.95■□□□□ 0.3
HDAC7-219ENST00000470668 POLR3GO15318 223 aaPredicted RBP16.95■□□□□ 0.3
HDAC7-219ENST00000470668 TSR1Q2NL82 804 aaKnown RBP16.95■□□□□ 0.3
HDAC7-219ENST00000470668 TRMT1Q9NXH9 659 aaKnown RBP16.95■□□□□ 0.3
HDAC7-219ENST00000470668 GRIN2AQ12879 1464 aa16.95■□□□□ 0.3
HDAC7-219ENST00000470668 H0YHG0 523 aa16.94■□□□□ 0.3
HDAC7-219ENST00000470668 CT47B1P0C2W7 299 aaPredicted RBP16.94■□□□□ 0.3
HDAC7-219ENST00000470668 RLBP1P12271 317 aa16.94■□□□□ 0.3
HDAC7-219ENST00000470668 PDCP20941 246 aa16.94■□□□□ 0.3
HDAC7-219ENST00000470668 DDX54Q8TDD1 881 aaKnown RBP16.94■□□□□ 0.3
HDAC7-219ENST00000470668 EXOC6BQ9Y2D4 811 aa16.94■□□□□ 0.3
HDAC7-219ENST00000470668 UBTFL1P0CB47 393 aaPredicted RBP16.94■□□□□ 0.3
HDAC7-219ENST00000470668 PRIMPOLQ96LW4 560 aa16.94■□□□□ 0.3
HDAC7-219ENST00000470668 GTF2F1P35269 517 aaKnown RBP eCLIP16.93■□□□□ 0.32e-7■■■■□ 23.7
HDAC7-219ENST00000470668 TMPOP42166 694 aaKnown RBP16.93■□□□□ 0.3
HDAC7-219ENST00000470668 PTPN14Q15678 1187 aa16.93■□□□□ 0.3
HDAC7-219ENST00000470668 LRSAM1Q6UWE0 723 aa16.93■□□□□ 0.3
HDAC7-219ENST00000470668 IL1RAPL2Q9NP60 686 aa16.93■□□□□ 0.3
HDAC7-219ENST00000470668 CKAP2LQ8IYA6 745 aa16.93■□□□□ 0.3
HDAC7-219ENST00000470668 UBXN4Q92575 508 aa16.93■□□□□ 0.3
HDAC7-219ENST00000470668 CCDC183Q5T5S1 534 aa16.93■□□□□ 0.3
HDAC7-219ENST00000470668 SLC4A2P04920 1241 aa16.92■□□□□ 0.3
HDAC7-219ENST00000470668 BMP2KLQ5H9B9 411 aa16.92■□□□□ 0.3
HDAC7-219ENST00000470668 EID1Q9Y6B2 187 aa16.92■□□□□ 0.3
HDAC7-219ENST00000470668 KDM4AO75164 1064 aa16.92■□□□□ 0.3
HDAC7-219ENST00000470668 MAP3K11Q16584 847 aa16.92■□□□□ 0.3
HDAC7-219ENST00000470668 SYNE3Q6ZMZ3 975 aa16.92■□□□□ 0.3
HDAC7-219ENST00000470668 PLCD3Q8N3E9 789 aa16.92■□□□□ 0.3
HDAC7-219ENST00000470668 CCDC94Q9BW85 323 aaPredicted RBP16.92■□□□□ 0.3
HDAC7-219ENST00000470668 CNTROBQ8N137 903 aa16.92■□□□□ 0.3
HDAC7-219ENST00000470668 AK7Q96M32 723 aa16.91■□□□□ 0.3
HDAC7-219ENST00000470668 CSB-PGBD3P0DP91 1061 aa16.91■□□□□ 0.3
HDAC7-219ENST00000470668 RAB3GAP1Q15042 981 aa16.91■□□□□ 0.3
HDAC7-219ENST00000470668 TSC1Q92574 1164 aa16.91■□□□□ 0.3
HDAC7-219ENST00000470668 SPINK5Q9NQ38 1064 aaPredicted RBP16.91■□□□□ 0.3
HDAC7-219ENST00000470668 SPATA32Q96LK8 384 aa16.9■□□□□ 0.3
HDAC7-219ENST00000470668 KDM2BQ8NHM5 1336 aa16.9■□□□□ 0.3
HDAC7-219ENST00000470668 CALCOCO1Q9P1Z2 691 aa16.9■□□□□ 0.3
HDAC7-219ENST00000470668 CYP46A1Q9Y6A2 500 aa16.9■□□□□ 0.3
HDAC7-219ENST00000470668 PLEKHH2Q8IVE3 1493 aa16.89■□□□□ 0.3
HDAC7-219ENST00000470668 IPO7O95373 1038 aaKnown RBP16.89■□□□□ 0.29
HDAC7-219ENST00000470668 CLASRPQ8N2M8 674 aaKnown RBP16.89■□□□□ 0.29
HDAC7-219ENST00000470668 ZNF428Q96B54 188 aa16.89■□□□□ 0.29
HDAC7-219ENST00000470668 ACBD3Q9H3P7 528 aa16.89■□□□□ 0.29
HDAC7-219ENST00000470668 CABP1Q9NZU7 370 aa16.89■□□□□ 0.29
HDAC7-219ENST00000470668 ADGRF5Q8IZF2 1346 aa16.89■□□□□ 0.29
HDAC7-219ENST00000470668 PLEKHH1Q9ULM0 1364 aa16.89■□□□□ 0.29
HDAC7-219ENST00000470668 G3BP1Q13283 466 aaKnown RBP eCLIP16.89■□□□□ 0.29
HDAC7-219ENST00000470668 CCDC70Q6NSX1 233 aa16.89■□□□□ 0.29
HDAC7-219ENST00000470668 GIMAP6Q6P9H5 292 aa16.89■□□□□ 0.29
HDAC7-219ENST00000470668 CCDC83Q8IWF9 413 aa16.89■□□□□ 0.29
HDAC7-219ENST00000470668 LRRCC1Q9C099 1032 aa16.89■□□□□ 0.29
HDAC7-219ENST00000470668 RBSNQ9H1K0 784 aa16.89■□□□□ 0.29
HDAC7-219ENST00000470668 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.89■□□□□ 0.29
HDAC7-219ENST00000470668 V9GYY5 206 aaPredicted RBP16.89■□□□□ 0.29
HDAC7-219ENST00000470668 GNAI2P04899 355 aa16.88■□□□□ 0.29
HDAC7-219ENST00000470668 GNAI3P08754 354 aa16.88■□□□□ 0.29
HDAC7-219ENST00000470668 TAF7LQ5H9L4 462 aa16.88■□□□□ 0.29
HDAC7-219ENST00000470668 TXNDC2Q86VQ3 553 aa16.88■□□□□ 0.29
HDAC7-219ENST00000470668 ME1P48163 572 aa16.88■□□□□ 0.29
HDAC7-219ENST00000470668 TMCO3Q6UWJ1 677 aa16.88■□□□□ 0.29
HDAC7-219ENST00000470668 ZFP91Q96JP5 570 aaPredicted RBP16.88■□□□□ 0.29
HDAC7-219ENST00000470668 CWC27Q6UX04 472 aaKnown RBP16.88■□□□□ 0.29
HDAC7-219ENST00000470668 FSD1Q9BTV5 496 aa16.88■□□□□ 0.29
HDAC7-219ENST00000470668 CPLX2Q6PUV4 134 aaKnown RBP16.87■□□□□ 0.29
HDAC7-219ENST00000470668 SMAP1Q8IYB5 467 aaPredicted RBP16.87■□□□□ 0.29
HDAC7-219ENST00000470668 JAKMIP1Q96N16 626 aaKnown RBP16.87■□□□□ 0.29
HDAC7-219ENST00000470668 KIF18AQ8NI77 898 aa16.87■□□□□ 0.29
HDAC7-219ENST00000470668 GPATCH8Q9UKJ3 1502 aaKnown RBP16.87■□□□□ 0.29
HDAC7-219ENST00000470668 PSMA5P28066 241 aa16.87■□□□□ 0.29
HDAC7-219ENST00000470668 AXDND1Q5T1B0 1012 aaPredicted RBP16.87■□□□□ 0.29
HDAC7-219ENST00000470668 SMC5Q8IY18 1101 aa16.87■□□□□ 0.29
HDAC7-219ENST00000470668 DHX29Q7Z478 1369 aaKnown RBP16.87■□□□□ 0.29
HDAC7-219ENST00000470668 SERPINC1P01008 464 aa16.87■□□□□ 0.29
HDAC7-219ENST00000470668 CCDC141Q6ZP82 1450 aa16.87■□□□□ 0.29
HDAC7-219ENST00000470668 ZGPATQ8N5A5 531 aaKnown RBP16.86■□□□□ 0.29
HDAC7-219ENST00000470668 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.86■□□□□ 0.29
HDAC7-219ENST00000470668 DISP3Q9P2K9 1392 aa16.86■□□□□ 0.29
HDAC7-219ENST00000470668 TEFQ10587 303 aa16.86■□□□□ 0.29
HDAC7-219ENST00000470668 STAC3Q96MF2 364 aa16.86■□□□□ 0.29
HDAC7-219ENST00000470668 C17orf53Q8N3J3 647 aaPredicted RBP16.86■□□□□ 0.29
HDAC7-219ENST00000470668 PCMTD1Q96MG8 357 aaPredicted RBP16.86■□□□□ 0.29
HDAC7-219ENST00000470668 NOL7Q9UMY1 257 aaKnown RBP16.86■□□□□ 0.29
HDAC7-219ENST00000470668 GAS2L3Q86XJ1 694 aa16.85■□□□□ 0.29
HDAC7-219ENST00000470668 SNX21Q969T3 373 aa16.85■□□□□ 0.29
HDAC7-219ENST00000470668 RUFY1Q96T51 708 aa16.85■□□□□ 0.29
HDAC7-219ENST00000470668 CLIP2Q9UDT6 1046 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms