RNA–Protein interactions for RNA: ENST00000470188.5

CDHR3-207, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,199 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-207ENST00000470188 PDZRN3Q9UPQ7 1066 aa25.56■■□□□ 1.68
CDHR3-207ENST00000470188 ITPRIPQ8IWB1 547 aa25.56■■□□□ 1.68
CDHR3-207ENST00000470188 CALD1Q05682 793 aaKnown RBP25.55■■□□□ 1.68
CDHR3-207ENST00000470188 RRS1Q15050 365 aaKnown RBP25.55■■□□□ 1.68
CDHR3-207ENST00000470188 ALDH1L2Q3SY69 923 aa25.55■■□□□ 1.68
CDHR3-207ENST00000470188 BRPF3Q9ULD4 1205 aa25.55■■□□□ 1.68
CDHR3-207ENST00000470188 LTKP29376 864 aa25.55■■□□□ 1.68
CDHR3-207ENST00000470188 IPO8O15397 1037 aaKnown RBP25.54■■□□□ 1.68
CDHR3-207ENST00000470188 SLC4A3P48751 1232 aa25.53■■□□□ 1.68
CDHR3-207ENST00000470188 ZNF428Q96B54 188 aa25.52■■□□□ 1.68
CDHR3-207ENST00000470188 THUMPD2Q9BTF0 503 aaKnown RBP25.51■■□□□ 1.67
CDHR3-207ENST00000470188 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.51■■□□□ 1.67
CDHR3-207ENST00000470188 TMEM57Q8N5G2 664 aa25.51■■□□□ 1.67
CDHR3-207ENST00000470188 CEBPAP49715 358 aaPredicted RBP25.5■■□□□ 1.67
CDHR3-207ENST00000470188 GNAI1P63096 354 aa25.49■■□□□ 1.67
CDHR3-207ENST00000470188 IFT57Q9NWB7 429 aa25.49■■□□□ 1.67
CDHR3-207ENST00000470188 HDAC1Q13547 482 aaPredicted RBP25.48■■□□□ 1.67
CDHR3-207ENST00000470188 EID1Q9Y6B2 187 aa25.48■■□□□ 1.67
CDHR3-207ENST00000470188 ACEP12821 1306 aa25.48■■□□□ 1.67
CDHR3-207ENST00000470188 TTC21BQ7Z4L5 1316 aa25.48■■□□□ 1.67
CDHR3-207ENST00000470188 LMOD3Q0VAK6 560 aa25.48■■□□□ 1.67
CDHR3-207ENST00000470188 SLC26A8Q96RN1 970 aa25.47■■□□□ 1.67
CDHR3-207ENST00000470188 TOPAZ1Q8N9V7 1692 aa25.47■■□□□ 1.67
CDHR3-207ENST00000470188 PLEKHG3A1L390 1219 aa25.46■■□□□ 1.67
CDHR3-207ENST00000470188 BRPF1P55201 1214 aaPredicted RBP25.46■■□□□ 1.67
CDHR3-207ENST00000470188 NRKQ7Z2Y5 1582 aa25.46■■□□□ 1.67
CDHR3-207ENST00000470188 USP19O94966 1318 aa25.46■■□□□ 1.67
CDHR3-207ENST00000470188 FER1L4A9Z1Z3 1794 aa25.46■■□□□ 1.67
CDHR3-207ENST00000470188 PTPRUQ92729 1446 aa25.45■■□□□ 1.67
CDHR3-207ENST00000470188 NUTM2FA1L443 756 aa25.45■■□□□ 1.67
CDHR3-207ENST00000470188 SEC24BO95487 1268 aa25.45■■□□□ 1.67
CDHR3-207ENST00000470188 ZBTB40Q9NUA8 1239 aa25.45■■□□□ 1.67
CDHR3-207ENST00000470188 ZNF853P0CG23 659 aa25.45■■□□□ 1.66
CDHR3-207ENST00000470188 VAMP4O75379 141 aa25.44■■□□□ 1.66
CDHR3-207ENST00000470188 MBIPQ9NS73 344 aa25.44■■□□□ 1.66
CDHR3-207ENST00000470188 OVOS2A0A0J9YW53 1432 aa25.43■■□□□ 1.66
CDHR3-207ENST00000470188 USP6P35125 1406 aa25.43■■□□□ 1.66
CDHR3-207ENST00000470188 OVOS2Q6IE36 1432 aa25.43■■□□□ 1.66
CDHR3-207ENST00000470188 SLIT1O75093 1534 aa25.41■■□□□ 1.66
CDHR3-207ENST00000470188 FRAT2O75474 233 aaPredicted RBP25.41■■□□□ 1.66
CDHR3-207ENST00000470188 TSPYL6Q8N831 410 aa25.41■■□□□ 1.66
CDHR3-207ENST00000470188 CFAP44Q96MT7 982 aa25.41■■□□□ 1.66
CDHR3-207ENST00000470188 EIF4A2Q14240 407 aaKnown RBP25.41■■□□□ 1.66
CDHR3-207ENST00000470188 MRPL50Q8N5N7 158 aaKnown RBP25.41■■□□□ 1.66
CDHR3-207ENST00000470188 ARHGAP23Q9P227 1491 aa25.4■■□□□ 1.66
CDHR3-207ENST00000470188 AMOTL2Q9Y2J4 779 aa25.39■■□□□ 1.66
CDHR3-207ENST00000470188 DLG5Q8TDM6 1919 aa25.39■■□□□ 1.66
CDHR3-207ENST00000470188 SMC5Q8IY18 1101 aa25.39■■□□□ 1.65
CDHR3-207ENST00000470188 PLPPR3Q6T4P5 718 aa25.38■■□□□ 1.65
CDHR3-207ENST00000470188 ARHGAP45Q92619 1136 aa25.38■■□□□ 1.65
CDHR3-207ENST00000470188 FAM83GA6ND36 823 aa25.38■■□□□ 1.65
CDHR3-207ENST00000470188 UPF2Q9HAU5 1272 aaKnown RBP25.38■■□□□ 1.65
CDHR3-207ENST00000470188 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.38■■□□□ 1.65
CDHR3-207ENST00000470188 TBX22Q9Y458 520 aa25.38■■□□□ 1.65
CDHR3-207ENST00000470188 ELL2O00472 640 aaPredicted RBP25.37■■□□□ 1.65
CDHR3-207ENST00000470188 TWISTNBQ3B726 338 aaPredicted RBP25.37■■□□□ 1.65
CDHR3-207ENST00000470188 SULT6B1Q6IMI4 303 aa25.37■■□□□ 1.65
CDHR3-207ENST00000470188 AEBP1Q8IUX7 1158 aa25.37■■□□□ 1.65
CDHR3-207ENST00000470188 PTCH1Q13635 1447 aa25.37■■□□□ 1.65
CDHR3-207ENST00000470188 FAM43AQ8N2R8 423 aa25.35■■□□□ 1.65
CDHR3-207ENST00000470188 USP31Q70CQ4 1352 aa25.35■■□□□ 1.65
CDHR3-207ENST00000470188 DCTN1Q14203 1278 aa25.35■■□□□ 1.65
CDHR3-207ENST00000470188 NALCNQ8IZF0 1738 aa25.35■■□□□ 1.65
CDHR3-207ENST00000470188 SSH2Q76I76 1423 aa25.34■■□□□ 1.65
CDHR3-207ENST00000470188 C8orf58Q8NAV2 365 aa25.34■■□□□ 1.65
CDHR3-207ENST00000470188 CHMP4BQ9H444 224 aaKnown RBP25.34■■□□□ 1.65
CDHR3-207ENST00000470188 PIK3R4Q99570 1358 aa25.34■■□□□ 1.65
CDHR3-207ENST00000470188 THEMISQ8N1K5 641 aaPredicted RBP25.32■■□□□ 1.64
CDHR3-207ENST00000470188 TTC21AQ8NDW8 1320 aa25.32■■□□□ 1.64
CDHR3-207ENST00000470188 HSP90AB2PQ58FF8 381 aa25.32■■□□□ 1.64
CDHR3-207ENST00000470188 PEAK1Q9H792 1746 aa25.32■■□□□ 1.64
CDHR3-207ENST00000470188 ZBTB7BO15156 539 aaPredicted RBP25.31■■□□□ 1.64
CDHR3-207ENST00000470188 BECN1Q14457 450 aa25.31■■□□□ 1.64
CDHR3-207ENST00000470188 ADAMTSL3P82987 1691 aa25.31■■□□□ 1.64
CDHR3-207ENST00000470188 TBC1D32Q96NH3 1257 aa25.31■■□□□ 1.64
CDHR3-207ENST00000470188 ABCC4O15439 1325 aa25.3■■□□□ 1.64
CDHR3-207ENST00000470188 SOX12O15370 315 aa25.3■■□□□ 1.64
CDHR3-207ENST00000470188 RIMS1Q86UR5 1692 aaKnown RBP25.3■■□□□ 1.64
CDHR3-207ENST00000470188 DIP2AQ14689 1571 aa25.3■■□□□ 1.64
CDHR3-207ENST00000470188 NUCB1Q02818 461 aa25.28■■□□□ 1.64
CDHR3-207ENST00000470188 NGDNQ8NEJ9 315 aaKnown RBP25.28■■□□□ 1.64
CDHR3-207ENST00000470188 RGPD1P0DJD0 1748 aa25.27■■□□□ 1.64
CDHR3-207ENST00000470188 API5Q9BZZ5 524 aaKnown RBP25.27■■□□□ 1.64
CDHR3-207ENST00000470188 MAP3K19Q56UN5 1328 aa25.25■■□□□ 1.63
CDHR3-207ENST00000470188 ARHGEF10O15013 1369 aa25.24■■□□□ 1.63
CDHR3-207ENST00000470188 MCM10Q7L590 875 aa25.24■■□□□ 1.63
CDHR3-207ENST00000470188 CHD1LQ86WJ1 897 aa25.24■■□□□ 1.63
CDHR3-207ENST00000470188 C1orf115Q9H7X2 142 aa25.24■■□□□ 1.63
CDHR3-207ENST00000470188 CHL1O00533 1208 aa25.23■■□□□ 1.63
CDHR3-207ENST00000470188 HAP1P54257 671 aaPredicted RBP25.23■■□□□ 1.63
CDHR3-207ENST00000470188 LNPKQ9C0E8 428 aa25.23■■□□□ 1.63
CDHR3-207ENST00000470188 SBNO1A3KN83 1393 aa25.23■■□□□ 1.63
CDHR3-207ENST00000470188 FLT4P35916 1363 aa25.23■■□□□ 1.63
CDHR3-207ENST00000470188 GCC1Q96CN9 775 aa25.22■■□□□ 1.63
CDHR3-207ENST00000470188 XRN1Q8IZH2 1706 aaKnown RBP25.22■■□□□ 1.63
CDHR3-207ENST00000470188 RGPD8O14715 1765 aaPredicted RBP25.2■■□□□ 1.62
CDHR3-207ENST00000470188 L1TD1Q5T7N2 865 aaKnown RBP25.2■■□□□ 1.62
CDHR3-207ENST00000470188 UBE2Q2Q8WVN8 375 aa25.2■■□□□ 1.62
CDHR3-207ENST00000470188 FMN2Q9NZ56 1722 aa25.19■■□□□ 1.62
CDHR3-207ENST00000470188 KIF24Q5T7B8 1368 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms