RNA–Protein interactions for RNA: ENST00000470068.2

CCDC144A-212, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-212ENST00000470068 TIAM1Q13009 1591 aa7.36□□□□□ -1.23
CCDC144A-212ENST00000470068 CCT4P50991 539 aaKnown RBP7.36□□□□□ -1.23
CCDC144A-212ENST00000470068 SMARCE1Q969G3 411 aa7.36□□□□□ -1.23
CCDC144A-212ENST00000470068 TULP1O00294 542 aaPredicted RBP7.36□□□□□ -1.23
CCDC144A-212ENST00000470068 USP8P40818 1118 aa7.36□□□□□ -1.23
CCDC144A-212ENST00000470068 CCDC73Q6ZRK6 1079 aa7.36□□□□□ -1.23
CCDC144A-212ENST00000470068 CCDC146Q8IYE0 955 aa7.36□□□□□ -1.23
CCDC144A-212ENST00000470068 HMGB3O15347 200 aaKnown RBP7.35□□□□□ -1.23
CCDC144A-212ENST00000470068 TCEAL9Q9UHQ7 104 aa7.35□□□□□ -1.23
CCDC144A-212ENST00000470068 FAM135AQ9P2D6 1515 aa7.35□□□□□ -1.23
CCDC144A-212ENST00000470068 CBFA2T2O43439 604 aa7.35□□□□□ -1.23
CCDC144A-212ENST00000470068 PDE4CQ08493 712 aa7.35□□□□□ -1.23
CCDC144A-212ENST00000470068 TEFQ10587 303 aa7.35□□□□□ -1.23
CCDC144A-212ENST00000470068 TPD52L1Q16890 204 aaPredicted RBP7.35□□□□□ -1.23
CCDC144A-212ENST00000470068 ANKRD18AQ8IVF6 992 aa7.35□□□□□ -1.23
CCDC144A-212ENST00000470068 MYCNP04198 464 aaPredicted RBP7.35□□□□□ -1.23
CCDC144A-212ENST00000470068 MCM5P33992 734 aa7.35□□□□□ -1.23
CCDC144A-212ENST00000470068 YEATS2Q9ULM3 1422 aa7.35□□□□□ -1.23
CCDC144A-212ENST00000470068 FRAT2O75474 233 aaPredicted RBP7.34□□□□□ -1.23
CCDC144A-212ENST00000470068 TRIM37O94972 964 aa7.34□□□□□ -1.23
CCDC144A-212ENST00000470068 TTC5Q8N0Z6 440 aa7.34□□□□□ -1.23
CCDC144A-212ENST00000470068 WASF1Q92558 559 aa7.34□□□□□ -1.23
CCDC144A-212ENST00000470068 FAM107BQ9H098 131 aa7.34□□□□□ -1.23
CCDC144A-212ENST00000470068 NPHP3Q7Z494 1330 aa7.34□□□□□ -1.23
CCDC144A-212ENST00000470068 NEMFO60524 1076 aa7.34□□□□□ -1.23
CCDC144A-212ENST00000470068 CDKL5O76039 1030 aa7.34□□□□□ -1.23
CCDC144A-212ENST00000470068 PDE4AP27815 886 aa7.34□□□□□ -1.23
CCDC144A-212ENST00000470068 EN1Q05925 392 aaPredicted RBP7.34□□□□□ -1.23
CCDC144A-212ENST00000470068 ABTB2Q8N961 1025 aa7.34□□□□□ -1.23
CCDC144A-212ENST00000470068 DDX11Q96FC9 970 aa7.34□□□□□ -1.23
CCDC144A-212ENST00000470068 GBP3Q9H0R5 595 aa7.34□□□□□ -1.23
CCDC144A-212ENST00000470068 CABP2Q9NPB3 220 aa7.34□□□□□ -1.23
CCDC144A-212ENST00000470068 FCHSD2O94868 740 aa7.34□□□□□ -1.23
CCDC144A-212ENST00000470068 TRAF1Q13077 416 aa7.34□□□□□ -1.23
CCDC144A-212ENST00000470068 G3BP1Q13283 466 aaKnown RBP eCLIP7.34□□□□□ -1.23
CCDC144A-212ENST00000470068 CCDC30Q5VVM6 783 aa7.34□□□□□ -1.23
CCDC144A-212ENST00000470068 DDX12PQ92771 950 aa7.34□□□□□ -1.23
CCDC144A-212ENST00000470068 FILIP1LQ4L180 1135 aa7.34□□□□□ -1.23
CCDC144A-212ENST00000470068 OLFM4Q6UX06 510 aa7.33□□□□□ -1.24
CCDC144A-212ENST00000470068 CNTROBQ8N137 903 aa7.33□□□□□ -1.24
CCDC144A-212ENST00000470068 ZNF622Q969S3 477 aaKnown RBP eCLIP7.33□□□□□ -1.24
CCDC144A-212ENST00000470068 ERLIN2O94905 339 aa7.33□□□□□ -1.24
CCDC144A-212ENST00000470068 TXLNAP40222 546 aa7.33□□□□□ -1.24
CCDC144A-212ENST00000470068 PLCB2Q00722 1185 aa7.33□□□□□ -1.24
CCDC144A-212ENST00000470068 DDB1Q16531 1140 aa7.33□□□□□ -1.24
CCDC144A-212ENST00000470068 SASS6Q6UVJ0 657 aa7.33□□□□□ -1.24
CCDC144A-212ENST00000470068 BICDL1Q6ZP65 573 aa7.33□□□□□ -1.24
CCDC144A-212ENST00000470068 FAM196AQ6ZSG2 479 aa7.33□□□□□ -1.24
CCDC144A-212ENST00000470068 PHAXQ9H814 394 aaKnown RBP7.33□□□□□ -1.24
CCDC144A-212ENST00000470068 CTNNA3Q9UI47 895 aa7.33□□□□□ -1.24
CCDC144A-212ENST00000470068 IL16Q14005 1332 aa7.33□□□□□ -1.24
CCDC144A-212ENST00000470068 IFIT2P09913 472 aaKnown RBP7.33□□□□□ -1.24
CCDC144A-212ENST00000470068 HSP90B2PQ58FF3 399 aa7.33□□□□□ -1.24
CCDC144A-212ENST00000470068 TNRQ92752 1358 aa7.32□□□□□ -1.24
CCDC144A-212ENST00000470068 C11orf95C9JLR9 678 aaPredicted RBP7.32□□□□□ -1.24
CCDC144A-212ENST00000470068 KANK4Q5T7N3 995 aaPredicted RBP7.32□□□□□ -1.24
CCDC144A-212ENST00000470068 DEFB132Q7Z7B7 95 aa7.32□□□□□ -1.24
CCDC144A-212ENST00000470068 RPAP2Q8IXW5 612 aaPredicted RBP7.32□□□□□ -1.24
CCDC144A-212ENST00000470068 DDX49Q9Y6V7 483 aaKnown RBP7.32□□□□□ -1.24
CCDC144A-212ENST00000470068 B4GALNT3Q6L9W6 998 aa7.32□□□□□ -1.24
CCDC144A-212ENST00000470068 HOOK3Q86VS8 718 aa7.32□□□□□ -1.24
CCDC144A-212ENST00000470068 SEPT12Q8IYM1 358 aa7.32□□□□□ -1.24
CCDC144A-212ENST00000470068 ZNHIT6Q9NWK9 470 aaKnown RBP7.32□□□□□ -1.24
CCDC144A-212ENST00000470068 TRIM6-TRIM34B2RNG4 842 aa7.32□□□□□ -1.24
CCDC144A-212ENST00000470068 NLRP6P59044 892 aa7.32□□□□□ -1.24
CCDC144A-212ENST00000470068 FBXO31Q5XUX0 539 aaPredicted RBP7.32□□□□□ -1.24
CCDC144A-212ENST00000470068 RFX1P22670 979 aa7.32□□□□□ -1.24
CCDC144A-212ENST00000470068 ALDH1L2Q3SY69 923 aa7.32□□□□□ -1.24
CCDC144A-212ENST00000470068 PLEKHO1Q53GL0 409 aaPredicted RBP7.32□□□□□ -1.24
CCDC144A-212ENST00000470068 RASSF8Q8NHQ8 419 aa7.32□□□□□ -1.24
CCDC144A-212ENST00000470068 CLUAP1Q96AJ1 413 aa7.32□□□□□ -1.24
CCDC144A-212ENST00000470068 SLKQ9H2G2 1235 aaPredicted RBP7.32□□□□□ -1.24
CCDC144A-212ENST00000470068 MARCH6O60337 910 aa7.31□□□□□ -1.24
CCDC144A-212ENST00000470068 BCL2L13Q9BXK5 485 aa7.31□□□□□ -1.24
CCDC144A-212ENST00000470068 GNL3LQ9NVN8 582 aaKnown RBP7.31□□□□□ -1.24
CCDC144A-212ENST00000470068 CPLX1O14810 134 aa7.31□□□□□ -1.24
CCDC144A-212ENST00000470068 ERLIN1O75477 346 aa7.31□□□□□ -1.24
CCDC144A-212ENST00000470068 DESP17661 470 aa7.31□□□□□ -1.24
CCDC144A-212ENST00000470068 AMOTL2Q9Y2J4 779 aa7.31□□□□□ -1.24
CCDC144A-212ENST00000470068 CAMSAP2Q08AD1 1489 aa7.31□□□□□ -1.24
CCDC144A-212ENST00000470068 JCADQ9P266 1359 aa7.31□□□□□ -1.24
CCDC144A-212ENST00000470068 POTEB2H3BUK9 544 aa7.31□□□□□ -1.24
CCDC144A-212ENST00000470068 RAB11FIP3O75154 756 aa7.31□□□□□ -1.24
CCDC144A-212ENST00000470068 SMC2O95347 1197 aa7.31□□□□□ -1.24
CCDC144A-212ENST00000470068 ARHGEF6Q15052 776 aa7.31□□□□□ -1.24
CCDC144A-212ENST00000470068 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.31□□□□□ -1.24
CCDC144A-212ENST00000470068 PANK3Q9H999 370 aa7.31□□□□□ -1.24
CCDC144A-212ENST00000470068 ZNF287Q9HBT7 754 aa7.31□□□□□ -1.24
CCDC144A-212ENST00000470068 SMC3Q9UQE7 1217 aa7.31□□□□□ -1.24
CCDC144A-212ENST00000470068 TUBBP07437 444 aa7.31□□□□□ -1.24
CCDC144A-212ENST00000470068 ZMYM3Q14202 1370 aa7.31□□□□□ -1.24
CCDC144A-212ENST00000470068 C9orf84Q5VXU9 1444 aa7.31□□□□□ -1.24
CCDC144A-212ENST00000470068 CTAGE5O15320 804 aa7.3□□□□□ -1.24
CCDC144A-212ENST00000470068 EIF3JO75822 258 aaKnown RBP7.3□□□□□ -1.24
CCDC144A-212ENST00000470068 KIF20AO95235 890 aa7.3□□□□□ -1.24
CCDC144A-212ENST00000470068 TBC1D2BQ9UPU7 963 aa7.3□□□□□ -1.24
CCDC144A-212ENST00000470068 WDR33Q9C0J8 1336 aaKnown RBP7.3□□□□□ -1.24
CCDC144A-212ENST00000470068 GOLGA6L7A0A1B0GV03 622 aa7.3□□□□□ -1.24
CCDC144A-212ENST00000470068 EPB41L2O43491 1005 aaKnown RBP7.3□□□□□ -1.24
CCDC144A-212ENST00000470068 STIM1Q13586 685 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms