RNA–Protein interactions for RNA: ENST00000469762.5

SMC4-210, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 3,998 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-210ENST00000469762 CIZ1Q9ULV3 898 aaPredicted RBP12.88□□□□□ -0.35
SMC4-210ENST00000469762 RICTORQ6R327 1708 aa12.88□□□□□ -0.35
SMC4-210ENST00000469762 ABCC4O15439 1325 aa12.88□□□□□ -0.35
SMC4-210ENST00000469762 ZNF853P0CG23 659 aa12.88□□□□□ -0.35
SMC4-210ENST00000469762 GSPT1P15170 499 aaKnown RBP12.88□□□□□ -0.35
SMC4-210ENST00000469762 PREX1Q8TCU6 1659 aa12.87□□□□□ -0.35
SMC4-210ENST00000469762 FOXD4L1Q9NU39 408 aa12.87□□□□□ -0.35
SMC4-210ENST00000469762 RAPGEF3O95398 923 aa12.87□□□□□ -0.35
SMC4-210ENST00000469762 CABP1Q9NZU7 370 aa12.87□□□□□ -0.35
SMC4-210ENST00000469762 YEATS2Q9ULM3 1422 aa12.87□□□□□ -0.35
SMC4-210ENST00000469762 ALKQ9UM73 1620 aa12.86□□□□□ -0.35
SMC4-210ENST00000469762 TERF2IPQ9NYB0 399 aa12.86□□□□□ -0.35
SMC4-210ENST00000469762 SSFA2P28290 1259 aa12.86□□□□□ -0.35
SMC4-210ENST00000469762 ARHGAP45Q92619 1136 aa12.86□□□□□ -0.35
SMC4-210ENST00000469762 GCC1Q96CN9 775 aa12.86□□□□□ -0.35
SMC4-210ENST00000469762 CLEC17AQ6ZS10 378 aa12.86□□□□□ -0.35
SMC4-210ENST00000469762 K7ELQ4 463 aaPredicted RBP12.85□□□□□ -0.35
SMC4-210ENST00000469762 CDK19Q9BWU1 502 aa12.85□□□□□ -0.35
SMC4-210ENST00000469762 ESPNB1AK53 854 aa12.85□□□□□ -0.35
SMC4-210ENST00000469762 PNNQ9H307 717 aaKnown RBP12.85□□□□□ -0.35
SMC4-210ENST00000469762 MBIPQ9NS73 344 aa12.85□□□□□ -0.35
SMC4-210ENST00000469762 ISY1Q9ULR0 285 aaKnown RBP12.85□□□□□ -0.35
SMC4-210ENST00000469762 HMOX1P09601 288 aa12.85□□□□□ -0.35
SMC4-210ENST00000469762 HSP90AB1P08238 724 aaKnown RBP12.84□□□□□ -0.35
SMC4-210ENST00000469762 ZNF428Q96B54 188 aa12.84□□□□□ -0.35
SMC4-210ENST00000469762 NFE2L2Q16236 605 aa12.84□□□□□ -0.35
SMC4-210ENST00000469762 ELL2O00472 640 aaPredicted RBP12.84□□□□□ -0.35
SMC4-210ENST00000469762 C8orf58Q8NAV2 365 aa12.84□□□□□ -0.35
SMC4-210ENST00000469762 SETD1AO15047 1707 aaKnown RBP12.83□□□□□ -0.36
SMC4-210ENST00000469762 REREQ9P2R6 1566 aa12.83□□□□□ -0.36
SMC4-210ENST00000469762 PLEKHM2Q8IWE5 1019 aa12.83□□□□□ -0.36
SMC4-210ENST00000469762 IL13P35225 146 aa12.83□□□□□ -0.36
SMC4-210ENST00000469762 KIF13AQ9H1H9 1805 aa12.82□□□□□ -0.36
SMC4-210ENST00000469762 EMILIN1Q9Y6C2 1016 aa12.82□□□□□ -0.36
SMC4-210ENST00000469762 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.82□□□□□ -0.366e-65■■■■■ 143.5
SMC4-210ENST00000469762 C16orf71Q8IYS4 520 aaPredicted RBP12.82□□□□□ -0.36
SMC4-210ENST00000469762 NAP1L5Q96NT1 182 aaPredicted RBP12.82□□□□□ -0.36
SMC4-210ENST00000469762 RGS12O14924 1447 aa12.82□□□□□ -0.36
SMC4-210ENST00000469762 SLC52A1Q9NWF4 448 aa12.81□□□□□ -0.36
SMC4-210ENST00000469762 RIMBP3CA6NJZ7 1639 aa12.81□□□□□ -0.36
SMC4-210ENST00000469762 RIMBP3BA6NNM3 1639 aa12.81□□□□□ -0.36
SMC4-210ENST00000469762 RIMBP3Q9UFD9 1639 aa12.81□□□□□ -0.36
SMC4-210ENST00000469762 ATP10DQ9P241 1426 aa12.81□□□□□ -0.36
SMC4-210ENST00000469762 CYP2E1P05181 493 aaPredicted RBP12.81□□□□□ -0.36
SMC4-210ENST00000469762 GBP4Q96PP9 640 aa12.81□□□□□ -0.36
SMC4-210ENST00000469762 IFT57Q9NWB7 429 aa12.81□□□□□ -0.36
SMC4-210ENST00000469762 ZRANB1Q9UGI0 708 aa12.81□□□□□ -0.36
SMC4-210ENST00000469762 PKP1Q13835 747 aa12.81□□□□□ -0.36
SMC4-210ENST00000469762 FAM83GA6ND36 823 aa12.8□□□□□ -0.36
SMC4-210ENST00000469762 BAG4O95429 457 aaKnown RBP12.8□□□□□ -0.36
SMC4-210ENST00000469762 HDGFL2Q7Z4V5 671 aaPredicted RBP12.8□□□□□ -0.36
SMC4-210ENST00000469762 OTUD7AQ8TE49 926 aaPredicted RBP12.8□□□□□ -0.36
SMC4-210ENST00000469762 ATP7BP35670 1465 aa12.8□□□□□ -0.36
SMC4-210ENST00000469762 FBXO31Q5XUX0 539 aaPredicted RBP12.79□□□□□ -0.36
SMC4-210ENST00000469762 CPSF1Q10570 1443 aaKnown RBP12.79□□□□□ -0.36
SMC4-210ENST00000469762 SKOR2Q2VWA4 1001 aaPredicted RBP12.79□□□□□ -0.36
SMC4-210ENST00000469762 TWISTNBQ3B726 338 aaPredicted RBP12.79□□□□□ -0.36
SMC4-210ENST00000469762 WAPLQ7Z5K2 1190 aa12.79□□□□□ -0.36
SMC4-210ENST00000469762 PPP1R9BQ96SB3 815 aa12.79□□□□□ -0.36
SMC4-210ENST00000469762 CDC45O75419 566 aa12.79□□□□□ -0.36
SMC4-210ENST00000469762 DCTPP1Q9H773 170 aa12.79□□□□□ -0.36
SMC4-210ENST00000469762 USP26Q9BXU7 913 aa12.79□□□□□ -0.36
SMC4-210ENST00000469762 IBTKQ9P2D0 1353 aaPredicted RBP12.78□□□□□ -0.36
SMC4-210ENST00000469762 NEO1Q92859 1461 aa12.78□□□□□ -0.36
SMC4-210ENST00000469762 CDK12Q9NYV4 1490 aaPredicted RBP12.78□□□□□ -0.36
SMC4-210ENST00000469762 GNAI1P63096 354 aa12.78□□□□□ -0.36
SMC4-210ENST00000469762 DCTN1Q14203 1278 aa12.78□□□□□ -0.36
SMC4-210ENST00000469762 CFAP44Q96MT7 982 aa12.78□□□□□ -0.36
SMC4-210ENST00000469762 CPS1P31327 1500 aa12.78□□□□□ -0.36
SMC4-210ENST00000469762 KLHL40Q2TBA0 621 aa12.78□□□□□ -0.36
SMC4-210ENST00000469762 TTC22Q5TAA0 569 aa12.78□□□□□ -0.36
SMC4-210ENST00000469762 RIMS2Q9UQ26 1411 aa12.77□□□□□ -0.36
SMC4-210ENST00000469762 KRT24Q2M2I5 525 aa12.77□□□□□ -0.37
SMC4-210ENST00000469762 NME9Q86XW9 330 aa12.77□□□□□ -0.37
SMC4-210ENST00000469762 ZDHHC9Q9Y397 364 aa12.77□□□□□ -0.37
SMC4-210ENST00000469762 DLC1Q96QB1 1528 aa12.77□□□□□ -0.37
SMC4-210ENST00000469762 LMBRD1Q9NUN5 540 aa12.76□□□□□ -0.37
SMC4-210ENST00000469762 KIF24Q5T7B8 1368 aa12.75□□□□□ -0.37
SMC4-210ENST00000469762 INTS3Q68E01 1043 aaKnown RBP12.75□□□□□ -0.37
SMC4-210ENST00000469762 CHAMP1Q96JM3 812 aa12.75□□□□□ -0.37
SMC4-210ENST00000469762 TUBGCP6Q96RT7 1819 aa12.75□□□□□ -0.37
SMC4-210ENST00000469762 NCKAP5LQ9HCH0 1330 aa12.75□□□□□ -0.37
SMC4-210ENST00000469762 MON2Q7Z3U7 1717 aa12.75□□□□□ -0.37
SMC4-210ENST00000469762 NRXN3Q9Y4C0 1643 aa12.74□□□□□ -0.37
SMC4-210ENST00000469762 HSP90AA1P07900 732 aaKnown RBP12.74□□□□□ -0.37
SMC4-210ENST00000469762 ZGPATQ8N5A5 531 aaKnown RBP12.74□□□□□ -0.37
SMC4-210ENST00000469762 AATKQ6ZMQ8 1374 aa12.74□□□□□ -0.37
SMC4-210ENST00000469762 ZNF445P59923 1031 aa12.74□□□□□ -0.37
SMC4-210ENST00000469762 C3P01024 1663 aa12.74□□□□□ -0.37
SMC4-210ENST00000469762 SDSP20132 328 aa12.74□□□□□ -0.37
SMC4-210ENST00000469762 NASPP49321 788 aaPredicted RBP12.74□□□□□ -0.37
SMC4-210ENST00000469762 ANKRD44Q8N8A2 993 aa12.74□□□□□ -0.37
SMC4-210ENST00000469762 EDC4Q6P2E9 1401 aaKnown RBP12.74□□□□□ -0.37
SMC4-210ENST00000469762 RRS1Q15050 365 aaKnown RBP12.73□□□□□ -0.37
SMC4-210ENST00000469762 RABEP1Q15276 862 aa12.73□□□□□ -0.37
SMC4-210ENST00000469762 CEP85Q6P2H3 762 aa12.73□□□□□ -0.37
SMC4-210ENST00000469762 DDX49Q9Y6V7 483 aaKnown RBP12.73□□□□□ -0.37
SMC4-210ENST00000469762 SMARCA5O60264 1052 aaPredicted RBP12.73□□□□□ -0.37
SMC4-210ENST00000469762 CHMP4BQ9H444 224 aaKnown RBP12.73□□□□□ -0.37
SMC4-210ENST00000469762 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms