RNA–Protein interactions for RNA: ENST00000469750.5

BRAT1-204, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,226 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-204ENST00000469750 BTBD11A6QL63 1104 aa18.84■□□□□ 0.61
BRAT1-204ENST00000469750 NUTM2EB1AL46 878 aaPredicted RBP18.84■□□□□ 0.61
BRAT1-204ENST00000469750 NUTM2AQ8IVF1 878 aaPredicted RBP18.84■□□□□ 0.61
BRAT1-204ENST00000469750 CCDC57Q2TAC2 916 aa18.83■□□□□ 0.61
BRAT1-204ENST00000469750 KINO60870 393 aaKnown RBP18.83■□□□□ 0.6
BRAT1-204ENST00000469750 ATP2B1P20020 1258 aa18.83■□□□□ 0.6
BRAT1-204ENST00000469750 IFT57Q9NWB7 429 aa18.83■□□□□ 0.6
BRAT1-204ENST00000469750 CYP46A1Q9Y6A2 500 aa18.83■□□□□ 0.6
BRAT1-204ENST00000469750 LETM1O95202 739 aaPredicted RBP18.83■□□□□ 0.6
BRAT1-204ENST00000469750 MRE11P49959 708 aa18.82■□□□□ 0.6
BRAT1-204ENST00000469750 KCNH5Q8NCM2 988 aa18.82■□□□□ 0.6
BRAT1-204ENST00000469750 NACAP1Q9BZK3 213 aa18.82■□□□□ 0.6
BRAT1-204ENST00000469750 TMPOP42166 694 aaKnown RBP18.81■□□□□ 0.6
BRAT1-204ENST00000469750 ZNF396Q96N95 335 aaPredicted RBP18.81■□□□□ 0.6
BRAT1-204ENST00000469750 MPHOSPH8Q99549 860 aa18.81■□□□□ 0.6
BRAT1-204ENST00000469750 CD109Q6YHK3 1445 aa18.81■□□□□ 0.6
BRAT1-204ENST00000469750 SRGAP3O43295 1099 aa18.81■□□□□ 0.6
BRAT1-204ENST00000469750 TRAK2O60296 914 aa18.81■□□□□ 0.6
BRAT1-204ENST00000469750 CALRP27797 417 aaKnown RBP18.81■□□□□ 0.6
BRAT1-204ENST00000469750 NASPP49321 788 aaPredicted RBP18.81■□□□□ 0.6
BRAT1-204ENST00000469750 XPCQ01831 940 aaPredicted RBP18.81■□□□□ 0.6
BRAT1-204ENST00000469750 ANKRD1Q15327 319 aa18.81■□□□□ 0.6
BRAT1-204ENST00000469750 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.81■□□□□ 0.6
BRAT1-204ENST00000469750 CHD1LQ86WJ1 897 aa18.81■□□□□ 0.6
BRAT1-204ENST00000469750 CAMSAP2Q08AD1 1489 aa18.8■□□□□ 0.6
BRAT1-204ENST00000469750 GNAT3A8MTJ3 354 aa18.8■□□□□ 0.6
BRAT1-204ENST00000469750 NAP1L1P55209 391 aaKnown RBP18.8■□□□□ 0.6
BRAT1-204ENST00000469750 EPS15P42566 896 aa18.8■□□□□ 0.6
BRAT1-204ENST00000469750 RNF214Q8ND24 703 aa18.8■□□□□ 0.6
BRAT1-204ENST00000469750 LAMC3Q9Y6N6 1575 aa18.8■□□□□ 0.6
BRAT1-204ENST00000469750 WDR97A6NE52 1622 aa18.8■□□□□ 0.6
BRAT1-204ENST00000469750 ZSCAN25Q6NSZ9 544 aa18.79■□□□□ 0.6
BRAT1-204ENST00000469750 CAVIN1Q6NZI2 390 aaKnown RBP18.79■□□□□ 0.6
BRAT1-204ENST00000469750 ZC3H6P61129 1189 aaKnown RBP18.79■□□□□ 0.6
BRAT1-204ENST00000469750 STK38Q15208 465 aa18.79■□□□□ 0.6
BRAT1-204ENST00000469750 AACSQ86V21 672 aa18.79■□□□□ 0.6
BRAT1-204ENST00000469750 RPAP2Q8IXW5 612 aaPredicted RBP18.79■□□□□ 0.6
BRAT1-204ENST00000469750 OFD1O75665 1012 aa18.78■□□□□ 0.6
BRAT1-204ENST00000469750 TXLNAP40222 546 aa18.78■□□□□ 0.6
BRAT1-204ENST00000469750 PRPF40AO75400 957 aaKnown RBP18.78■□□□□ 0.6
BRAT1-204ENST00000469750 CCDC184Q52MB2 194 aa18.78■□□□□ 0.6
BRAT1-204ENST00000469750 FIBPO43427 364 aa18.78■□□□□ 0.6
BRAT1-204ENST00000469750 FAM43AQ8N2R8 423 aa18.78■□□□□ 0.6
BRAT1-204ENST00000469750 R3HCC1Q9Y3T6 440 aaKnown RBP18.78■□□□□ 0.6
BRAT1-204ENST00000469750 SLFN5Q08AF3 891 aa18.78■□□□□ 0.6
BRAT1-204ENST00000469750 CT47A1Q5JQC4 288 aaPredicted RBP18.78■□□□□ 0.6
BRAT1-204ENST00000469750 CEP126Q9P2H0 1117 aa18.78■□□□□ 0.6
BRAT1-204ENST00000469750 PCF11O94913 1555 aaKnown RBP18.78■□□□□ 0.6
BRAT1-204ENST00000469750 WAPLQ7Z5K2 1190 aa18.77■□□□□ 0.6
BRAT1-204ENST00000469750 PDILTQ8N807 584 aa18.77■□□□□ 0.6
BRAT1-204ENST00000469750 MNS1Q8NEH6 495 aa18.77■□□□□ 0.6
BRAT1-204ENST00000469750 CCDC39Q9UFE4 941 aa18.77■□□□□ 0.6
BRAT1-204ENST00000469750 PEG3Q9GZU2 1588 aa18.77■□□□□ 0.6
BRAT1-204ENST00000469750 AEBP1Q8IUX7 1158 aa18.77■□□□□ 0.59
BRAT1-204ENST00000469750 JMYQ8N9B5 988 aa18.77■□□□□ 0.59
BRAT1-204ENST00000469750 CDK5RAP3Q96JB5 506 aa18.77■□□□□ 0.59
BRAT1-204ENST00000469750 MAP4K4O95819 1239 aaPredicted RBP18.76■□□□□ 0.59
BRAT1-204ENST00000469750 TRIM22Q8IYM9 498 aa18.76■□□□□ 0.59
BRAT1-204ENST00000469750 FAM13BQ9NYF5 915 aa18.76■□□□□ 0.59
BRAT1-204ENST00000469750 PLB1Q6P1J6 1458 aa18.76■□□□□ 0.59
BRAT1-204ENST00000469750 MAP7D2Q96T17 732 aa18.76■□□□□ 0.59
BRAT1-204ENST00000469750 TRIM5Q9C035 493 aa18.76■□□□□ 0.59
BRAT1-204ENST00000469750 ADGRL1O94910 1474 aa18.75■□□□□ 0.59
BRAT1-204ENST00000469750 ABCC5O15440 1437 aa18.75■□□□□ 0.59
BRAT1-204ENST00000469750 FKBP4Q02790 459 aaKnown RBP eCLIP18.75■□□□□ 0.59
BRAT1-204ENST00000469750 BACH2Q9BYV9 841 aa18.75■□□□□ 0.59
BRAT1-204ENST00000469750 CUL7Q14999 1698 aa18.74■□□□□ 0.59
BRAT1-204ENST00000469750 K7ELQ4 463 aaPredicted RBP18.74■□□□□ 0.59
BRAT1-204ENST00000469750 SF3B2Q13435 895 aaKnown RBP18.74■□□□□ 0.59
BRAT1-204ENST00000469750 TSPY26PQ9H489 355 aa18.74■□□□□ 0.59
BRAT1-204ENST00000469750 KIF14Q15058 1648 aa18.74■□□□□ 0.59
BRAT1-204ENST00000469750 STK3Q13188 491 aa18.74■□□□□ 0.59
BRAT1-204ENST00000469750 IL1RAPL2Q9NP60 686 aa18.74■□□□□ 0.59
BRAT1-204ENST00000469750 CEBPZQ03701 1054 aaKnown RBP18.73■□□□□ 0.59
BRAT1-204ENST00000469750 ARGLU1Q9NWB6 273 aaPredicted RBP18.73■□□□□ 0.59
BRAT1-204ENST00000469750 WDR33Q9C0J8 1336 aaKnown RBP18.73■□□□□ 0.59
BRAT1-204ENST00000469750 BLOC1S2Q6QNY1 142 aa18.73■□□□□ 0.59
BRAT1-204ENST00000469750 TMEM57Q8N5G2 664 aa18.73■□□□□ 0.59
BRAT1-204ENST00000469750 CCDC69A6NI79 296 aa18.73■□□□□ 0.59
BRAT1-204ENST00000469750 ODF2Q5BJF6 829 aa18.73■□□□□ 0.59
BRAT1-204ENST00000469750 DUSP27Q5VZP5 1158 aa18.73■□□□□ 0.59
BRAT1-204ENST00000469750 MTERF4Q7Z6M4 381 aaKnown RBP18.73■□□□□ 0.59
BRAT1-204ENST00000469750 PTPN23Q9H3S7 1636 aa18.72■□□□□ 0.59
BRAT1-204ENST00000469750 FILIP1LQ4L180 1135 aa18.72■□□□□ 0.59
BRAT1-204ENST00000469750 ATP2B2Q01814 1243 aa18.72■□□□□ 0.59
BRAT1-204ENST00000469750 CTNNA3Q9UI47 895 aa18.72■□□□□ 0.59
BRAT1-204ENST00000469750 STARD3NLO95772 234 aa18.72■□□□□ 0.59
BRAT1-204ENST00000469750 GRIN2AQ12879 1464 aa18.71■□□□□ 0.59
BRAT1-204ENST00000469750 SMC2O95347 1197 aa18.71■□□□□ 0.59
BRAT1-204ENST00000469750 FMNL2Q96PY5 1086 aa18.71■□□□□ 0.59
BRAT1-204ENST00000469750 PIP4K2AP48426 406 aaPredicted RBP18.71■□□□□ 0.59
BRAT1-204ENST00000469750 MCM10Q7L590 875 aa18.71■□□□□ 0.59
BRAT1-204ENST00000469750 CNKSR2Q8WXI2 1034 aa18.71■□□□□ 0.59
BRAT1-204ENST00000469750 THUMPD2Q9BTF0 503 aaKnown RBP18.71■□□□□ 0.59
BRAT1-204ENST00000469750 TEX35Q5T0J7 233 aa18.7■□□□□ 0.58
BRAT1-204ENST00000469750 CCAR1Q8IX12 1150 aaKnown RBP18.7■□□□□ 0.58
BRAT1-204ENST00000469750 RUFY1Q96T51 708 aa18.7■□□□□ 0.58
BRAT1-204ENST00000469750 ABCC11Q96J66 1382 aa18.7■□□□□ 0.58
BRAT1-204ENST00000469750 STK11IPQ8N1F8 1099 aa18.7■□□□□ 0.58
BRAT1-204ENST00000469750 MIS18AQ9NYP9 233 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms