RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 TMEM57Q8N5G2 664 aa12.02□□□□□ -0.49
TOP3A-203ENST00000469739 MIS18AQ9NYP9 233 aa12.02□□□□□ -0.49
TOP3A-203ENST00000469739 CPS1P31327 1500 aa12.01□□□□□ -0.49
TOP3A-203ENST00000469739 ROBO2Q9HCK4 1378 aa12.01□□□□□ -0.49
TOP3A-203ENST00000469739 HSP90AB2PQ58FF8 381 aa12.01□□□□□ -0.49
TOP3A-203ENST00000469739 SULT6B1Q6IMI4 303 aa12.01□□□□□ -0.49
TOP3A-203ENST00000469739 NGEFQ8N5V2 710 aa12.01□□□□□ -0.49
TOP3A-203ENST00000469739 LTV1Q96GA3 475 aaPredicted RBP12.01□□□□□ -0.49
TOP3A-203ENST00000469739 RSPH6AQ9H0K4 717 aa12.01□□□□□ -0.49
TOP3A-203ENST00000469739 USP35Q9P2H5 1018 aa12.01□□□□□ -0.49
TOP3A-203ENST00000469739 NLRP1Q9C000 1473 aa12.01□□□□□ -0.49
TOP3A-203ENST00000469739 ACEP12821 1306 aa12.01□□□□□ -0.49
TOP3A-203ENST00000469739 SPRYD3Q8NCJ5 442 aa12□□□□□ -0.49
TOP3A-203ENST00000469739 PKNOX2Q96KN3 472 aa12□□□□□ -0.49
TOP3A-203ENST00000469739 TMEM2Q9UHN6 1383 aa12□□□□□ -0.49
TOP3A-203ENST00000469739 HDGFP51858 240 aaKnown RBP12□□□□□ -0.49
TOP3A-203ENST00000469739 MVPQ14764 893 aaKnown RBP12□□□□□ -0.49
TOP3A-203ENST00000469739 NGDNQ8NEJ9 315 aaKnown RBP12□□□□□ -0.49
TOP3A-203ENST00000469739 AMOTL2Q9Y2J4 779 aa12□□□□□ -0.49
TOP3A-203ENST00000469739 IQSEC2Q5JU85 1478 aa12□□□□□ -0.49
TOP3A-203ENST00000469739 CCDC27Q2M243 656 aa12□□□□□ -0.49
TOP3A-203ENST00000469739 MCM10Q7L590 875 aa12□□□□□ -0.49
TOP3A-203ENST00000469739 FCHSD2O94868 740 aa11.99□□□□□ -0.49
TOP3A-203ENST00000469739 MED14O60244 1454 aa11.99□□□□□ -0.49
TOP3A-203ENST00000469739 EID1Q9Y6B2 187 aa11.99□□□□□ -0.49
TOP3A-203ENST00000469739 TECPR2O15040 1411 aa11.99□□□□□ -0.49
TOP3A-203ENST00000469739 IGSF3O75054 1194 aa11.98□□□□□ -0.49
TOP3A-203ENST00000469739 PDIA4P13667 645 aaKnown RBP11.98□□□□□ -0.49
TOP3A-203ENST00000469739 ATF7IPQ6VMQ6 1270 aa11.98□□□□□ -0.49
TOP3A-203ENST00000469739 ATP7BP35670 1465 aa11.98□□□□□ -0.49
TOP3A-203ENST00000469739 IL13P35225 146 aa11.98□□□□□ -0.49
TOP3A-203ENST00000469739 BRPF3Q9ULD4 1205 aa11.98□□□□□ -0.49
TOP3A-203ENST00000469739 FOXO3O43524 673 aa11.97□□□□□ -0.49
TOP3A-203ENST00000469739 NFE2L2Q16236 605 aa11.97□□□□□ -0.49
TOP3A-203ENST00000469739 ADAMTS13Q76LX8 1427 aa11.97□□□□□ -0.49
TOP3A-203ENST00000469739 APBB1O00213 710 aa11.97□□□□□ -0.49
TOP3A-203ENST00000469739 C8orf58Q8NAV2 365 aa11.97□□□□□ -0.49
TOP3A-203ENST00000469739 MBIPQ9NS73 344 aa11.97□□□□□ -0.49
TOP3A-203ENST00000469739 COL3A1P02461 1466 aaPredicted RBP11.97□□□□□ -0.49
TOP3A-203ENST00000469739 FAM135BQ49AJ0 1406 aa11.96□□□□□ -0.49
TOP3A-203ENST00000469739 LNPKQ9C0E8 428 aa11.96□□□□□ -0.49
TOP3A-203ENST00000469739 RWDD1Q9H446 243 aaPredicted RBP11.96□□□□□ -0.49
TOP3A-203ENST00000469739 NECTIN2Q92692 538 aa11.96□□□□□ -0.5
TOP3A-203ENST00000469739 MON2Q7Z3U7 1717 aa11.96□□□□□ -0.5
TOP3A-203ENST00000469739 ITSN1Q15811 1721 aa11.95□□□□□ -0.5
TOP3A-203ENST00000469739 EIF4A2Q14240 407 aaKnown RBP11.95□□□□□ -0.5
TOP3A-203ENST00000469739 SLKQ9H2G2 1235 aaPredicted RBP11.95□□□□□ -0.5
TOP3A-203ENST00000469739 AKAP12Q02952 1782 aa11.95□□□□□ -0.5
TOP3A-203ENST00000469739 ADGRB2O60241 1585 aa11.95□□□□□ -0.5
TOP3A-203ENST00000469739 TTC21BQ7Z4L5 1316 aa11.95□□□□□ -0.5
TOP3A-203ENST00000469739 PLEKHG1Q9ULL1 1385 aa11.95□□□□□ -0.5
TOP3A-203ENST00000469739 PNNQ9H307 717 aaKnown RBP11.94□□□□□ -0.5
TOP3A-203ENST00000469739 CDC42BPGQ6DT37 1551 aa11.94□□□□□ -0.5
TOP3A-203ENST00000469739 SLIT1O75093 1534 aa11.94□□□□□ -0.5
TOP3A-203ENST00000469739 XPCQ01831 940 aaPredicted RBP11.94□□□□□ -0.5
TOP3A-203ENST00000469739 TWISTNBQ3B726 338 aaPredicted RBP11.94□□□□□ -0.5
TOP3A-203ENST00000469739 LMOD2Q6P5Q4 547 aa11.94□□□□□ -0.5
TOP3A-203ENST00000469739 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.94□□□□□ -0.5
TOP3A-203ENST00000469739 MAP2P11137 1827 aaKnown RBP11.93□□□□□ -0.5
TOP3A-203ENST00000469739 KCNA6P17658 529 aa11.93□□□□□ -0.5
TOP3A-203ENST00000469739 MFAP1P55081 439 aaKnown RBP11.93□□□□□ -0.5
TOP3A-203ENST00000469739 NLRP6P59044 892 aa11.93□□□□□ -0.5
TOP3A-203ENST00000469739 AMPHP49418 695 aa11.93□□□□□ -0.5
TOP3A-203ENST00000469739 TOPAZ1Q8N9V7 1692 aa11.92□□□□□ -0.5
TOP3A-203ENST00000469739 ARHGAP23Q9P227 1491 aa11.92□□□□□ -0.5
TOP3A-203ENST00000469739 VAMP4O75379 141 aa11.92□□□□□ -0.5
TOP3A-203ENST00000469739 USHBP1Q8N6Y0 703 aa11.92□□□□□ -0.5
TOP3A-203ENST00000469739 LRRC7Q96NW7 1537 aa11.92□□□□□ -0.5
TOP3A-203ENST00000469739 CPSF1Q10570 1443 aaKnown RBP11.92□□□□□ -0.5
TOP3A-203ENST00000469739 PNPLA6Q8IY17 1366 aa11.92□□□□□ -0.5
TOP3A-203ENST00000469739 DDX19BQ9UMR2 479 aa11.92□□□□□ -0.5
TOP3A-203ENST00000469739 SIRT1Q96EB6 747 aa11.91□□□□□ -0.5
TOP3A-203ENST00000469739 DDRGK1Q96HY6 314 aa11.91□□□□□ -0.5
TOP3A-203ENST00000469739 EDC4Q6P2E9 1401 aaKnown RBP11.91□□□□□ -0.5
TOP3A-203ENST00000469739 IPO8O15397 1037 aaKnown RBP11.91□□□□□ -0.5
TOP3A-203ENST00000469739 ZNF692Q9BU19 519 aaPredicted RBP11.91□□□□□ -0.5
TOP3A-203ENST00000469739 ANKRD45Q5TZF3 282 aa11.9□□□□□ -0.5
TOP3A-203ENST00000469739 GNAI1P63096 354 aa11.9□□□□□ -0.5
TOP3A-203ENST00000469739 PTPRUQ92729 1446 aa11.9□□□□□ -0.51
TOP3A-203ENST00000469739 NRKQ7Z2Y5 1582 aa11.89□□□□□ -0.51
TOP3A-203ENST00000469739 GSE1Q14687 1217 aa11.89□□□□□ -0.51
TOP3A-203ENST00000469739 MAP3K19Q56UN5 1328 aa11.89□□□□□ -0.51
TOP3A-203ENST00000469739 RIMS1Q86UR5 1692 aaKnown RBP11.89□□□□□ -0.51
TOP3A-203ENST00000469739 SLC4A10Q6U841 1118 aa11.89□□□□□ -0.51
TOP3A-203ENST00000469739 ABTB2Q8N961 1025 aa11.89□□□□□ -0.51
TOP3A-203ENST00000469739 ZNF428Q96B54 188 aa11.89□□□□□ -0.51
TOP3A-203ENST00000469739 ZBTB40Q9NUA8 1239 aa11.88□□□□□ -0.51
TOP3A-203ENST00000469739 USP19O94966 1318 aa11.88□□□□□ -0.51
TOP3A-203ENST00000469739 DIP2AQ14689 1571 aa11.88□□□□□ -0.51
TOP3A-203ENST00000469739 MRPL50Q8N5N7 158 aaKnown RBP11.88□□□□□ -0.51
TOP3A-203ENST00000469739 KIF16BQ96L93 1317 aa11.88□□□□□ -0.51
TOP3A-203ENST00000469739 SETD1BQ9UPS6 1966 aaKnown RBP11.88□□□□□ -0.51
TOP3A-203ENST00000469739 THEMISQ8N1K5 641 aaPredicted RBP11.87□□□□□ -0.51
TOP3A-203ENST00000469739 CEP170BQ9Y4F5 1589 aaPredicted RBP11.87□□□□□ -0.51
TOP3A-203ENST00000469739 F6X3S4 739 aa11.87□□□□□ -0.51
TOP3A-203ENST00000469739 UPF2Q9HAU5 1272 aaKnown RBP11.87□□□□□ -0.51
TOP3A-203ENST00000469739 XRN1Q8IZH2 1706 aaKnown RBP11.86□□□□□ -0.51
TOP3A-203ENST00000469739 IL16Q14005 1332 aa11.86□□□□□ -0.51
TOP3A-203ENST00000469739 FRAT2O75474 233 aaPredicted RBP11.86□□□□□ -0.51
TOP3A-203ENST00000469739 NFKBIBQ15653 356 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms