RNA–Protein interactions for RNA: ENST00000469694.5

GPC1-208, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 2,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-208ENST00000469694 PNNQ9H307 717 aaKnown RBP17.65■□□□□ 0.42
GPC1-208ENST00000469694 MAP2P11137 1827 aaKnown RBP17.64■□□□□ 0.41
GPC1-208ENST00000469694 NGEFQ8N5V2 710 aa17.64■□□□□ 0.41
GPC1-208ENST00000469694 TSR2Q969E8 191 aaKnown RBP17.64■□□□□ 0.41
GPC1-208ENST00000469694 PHACTR3Q96KR7 559 aa17.64■□□□□ 0.41
GPC1-208ENST00000469694 ITSN1Q15811 1721 aa17.64■□□□□ 0.41
GPC1-208ENST00000469694 XRN1Q8IZH2 1706 aaKnown RBP17.64■□□□□ 0.41
GPC1-208ENST00000469694 TRIM35Q9UPQ4 493 aa17.63■□□□□ 0.41
GPC1-208ENST00000469694 XRCC6P12956 609 aaKnown RBP eCLIP17.63■□□□□ 0.41
GPC1-208ENST00000469694 BECN1Q14457 450 aa17.63■□□□□ 0.41
GPC1-208ENST00000469694 RGPD8O14715 1765 aaPredicted RBP17.63■□□□□ 0.41
GPC1-208ENST00000469694 AKAP12Q02952 1782 aa17.63■□□□□ 0.41
GPC1-208ENST00000469694 IL13P35225 146 aa17.62■□□□□ 0.41
GPC1-208ENST00000469694 RIPK4P57078 832 aa17.62■□□□□ 0.41
GPC1-208ENST00000469694 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.62■□□□□ 0.41
GPC1-208ENST00000469694 BCL2L13Q9BXK5 485 aa17.62■□□□□ 0.41
GPC1-208ENST00000469694 HSP90AA1P07900 732 aaKnown RBP17.62■□□□□ 0.41
GPC1-208ENST00000469694 TOPAZ1Q8N9V7 1692 aa17.61■□□□□ 0.41
GPC1-208ENST00000469694 ANTXR1Q9H6X2 564 aa17.61■□□□□ 0.41
GPC1-208ENST00000469694 CCDC27Q2M243 656 aa17.61■□□□□ 0.41
GPC1-208ENST00000469694 WDR63Q8IWG1 891 aa17.61■□□□□ 0.41
GPC1-208ENST00000469694 FSD2A1L4K1 749 aa17.6■□□□□ 0.41
GPC1-208ENST00000469694 SLKQ9H2G2 1235 aaPredicted RBP17.6■□□□□ 0.41
GPC1-208ENST00000469694 AATKQ6ZMQ8 1374 aa17.6■□□□□ 0.41
GPC1-208ENST00000469694 LRRC7Q96NW7 1537 aa17.59■□□□□ 0.41
GPC1-208ENST00000469694 SETD1BQ9UPS6 1966 aaKnown RBP17.59■□□□□ 0.41
GPC1-208ENST00000469694 FCHSD2O94868 740 aa17.59■□□□□ 0.41
GPC1-208ENST00000469694 HSP90AB2PQ58FF8 381 aa17.59■□□□□ 0.41
GPC1-208ENST00000469694 C14orf37Q86TY3 774 aa17.59■□□□□ 0.41
GPC1-208ENST00000469694 PIK3R4Q99570 1358 aa17.59■□□□□ 0.41
GPC1-208ENST00000469694 THUMPD2Q9BTF0 503 aaKnown RBP17.59■□□□□ 0.41
GPC1-208ENST00000469694 ZNF142P52746 1687 aaPredicted RBP17.58■□□□□ 0.41
GPC1-208ENST00000469694 GOLGA6L3A6NEY3 463 aa17.58■□□□□ 0.41
GPC1-208ENST00000469694 VIRMAQ69YN4 1812 aaKnown RBP17.58■□□□□ 0.4
GPC1-208ENST00000469694 AEBP1Q8IUX7 1158 aa17.58■□□□□ 0.4
GPC1-208ENST00000469694 OVOS2A0A0J9YW53 1432 aa17.58■□□□□ 0.4
GPC1-208ENST00000469694 NPHP4O75161 1426 aaPredicted RBP17.58■□□□□ 0.4
GPC1-208ENST00000469694 OVOS2Q6IE36 1432 aa17.58■□□□□ 0.4
GPC1-208ENST00000469694 SSH2Q76I76 1423 aa17.58■□□□□ 0.4
GPC1-208ENST00000469694 SEC24BO95487 1268 aa17.58■□□□□ 0.4
GPC1-208ENST00000469694 NRKQ7Z2Y5 1582 aa17.57■□□□□ 0.4
GPC1-208ENST00000469694 PLEKHG5O94827 1062 aa17.57■□□□□ 0.4
GPC1-208ENST00000469694 CDK12Q9NYV4 1490 aaPredicted RBP17.56■□□□□ 0.4
GPC1-208ENST00000469694 EIF4A2Q14240 407 aaKnown RBP17.56■□□□□ 0.4
GPC1-208ENST00000469694 NLRP6P59044 892 aa17.56■□□□□ 0.4
GPC1-208ENST00000469694 TNNQ9UQP3 1299 aa17.55■□□□□ 0.4
GPC1-208ENST00000469694 RARSP54136 660 aaKnown RBP17.54■□□□□ 0.4
GPC1-208ENST00000469694 HSPA2P54652 639 aa17.54■□□□□ 0.4
GPC1-208ENST00000469694 MYH16Q9H6N6 1097 aa17.54■□□□□ 0.4
GPC1-208ENST00000469694 ESCO1Q5FWF5 840 aa17.54■□□□□ 0.4
GPC1-208ENST00000469694 PANK1Q8TE04 598 aa17.54■□□□□ 0.4
GPC1-208ENST00000469694 PANK2Q9BZ23 570 aa17.54■□□□□ 0.4
GPC1-208ENST00000469694 MAP3K19Q56UN5 1328 aa17.54■□□□□ 0.4
GPC1-208ENST00000469694 CANXP27824 592 aaKnown RBP17.54■□□□□ 0.4
GPC1-208ENST00000469694 EXOSC9Q06265 439 aaKnown RBP17.54■□□□□ 0.4
GPC1-208ENST00000469694 CHD2O14647 1828 aaKnown RBP17.53■□□□□ 0.4
GPC1-208ENST00000469694 IGHDP01880 384 aa17.53■□□□□ 0.4
GPC1-208ENST00000469694 XPCQ01831 940 aaPredicted RBP17.53■□□□□ 0.4
GPC1-208ENST00000469694 SULT6B1Q6IMI4 303 aa17.53■□□□□ 0.4
GPC1-208ENST00000469694 NALCNQ8IZF0 1738 aa17.53■□□□□ 0.4
GPC1-208ENST00000469694 ABTB2Q8N961 1025 aa17.53■□□□□ 0.4
GPC1-208ENST00000469694 ARXQ96QS3 562 aa17.53■□□□□ 0.4
GPC1-208ENST00000469694 PHF8Q9UPP1 1060 aa17.53■□□□□ 0.4
GPC1-208ENST00000469694 FAM83GA6ND36 823 aa17.52■□□□□ 0.4
GPC1-208ENST00000469694 TTC21AQ8NDW8 1320 aa17.52■□□□□ 0.39
GPC1-208ENST00000469694 ORAI2Q96SN7 254 aa17.51■□□□□ 0.39
GPC1-208ENST00000469694 DCTN1Q14203 1278 aa17.51■□□□□ 0.39
GPC1-208ENST00000469694 NFE2L2Q16236 605 aa17.51■□□□□ 0.39
GPC1-208ENST00000469694 CLUAP1Q96AJ1 413 aa17.51■□□□□ 0.39
GPC1-208ENST00000469694 ANKARQ7Z5J8 1434 aa17.5■□□□□ 0.39
GPC1-208ENST00000469694 USP31Q70CQ4 1352 aa17.5■□□□□ 0.39
GPC1-208ENST00000469694 COG6Q9Y2V7 657 aa17.5■□□□□ 0.39
GPC1-208ENST00000469694 MCM4P33991 863 aa17.49■□□□□ 0.39
GPC1-208ENST00000469694 PROSER2Q86WR7 435 aaPredicted RBP17.49■□□□□ 0.39
GPC1-208ENST00000469694 PEAK1Q9H792 1746 aa17.49■□□□□ 0.39
GPC1-208ENST00000469694 FMN2Q9NZ56 1722 aa17.49■□□□□ 0.39
GPC1-208ENST00000469694 AMPHP49418 695 aa17.49■□□□□ 0.39
GPC1-208ENST00000469694 FOXO3O43524 673 aa17.48■□□□□ 0.39
GPC1-208ENST00000469694 RLBP1P12271 317 aa17.48■□□□□ 0.39
GPC1-208ENST00000469694 TBC1D2Q9BYX2 928 aa17.48■□□□□ 0.39
GPC1-208ENST00000469694 ADGRL3Q9HAR2 1447 aa17.48■□□□□ 0.39
GPC1-208ENST00000469694 MRE11P49959 708 aa17.48■□□□□ 0.39
GPC1-208ENST00000469694 NCBP3Q53F19 620 aaKnown RBP17.48■□□□□ 0.39
GPC1-208ENST00000469694 PIK3C2AO00443 1686 aa17.48■□□□□ 0.39
GPC1-208ENST00000469694 PSME1Q06323 249 aa17.47■□□□□ 0.39
GPC1-208ENST00000469694 GZF1Q9H116 711 aaPredicted RBP17.47■□□□□ 0.39
GPC1-208ENST00000469694 LTV1Q96GA3 475 aaPredicted RBP17.46■□□□□ 0.39
GPC1-208ENST00000469694 ZBTB7CA1YPR0 619 aa17.46■□□□□ 0.38
GPC1-208ENST00000469694 ELL2O00472 640 aaPredicted RBP17.46■□□□□ 0.38
GPC1-208ENST00000469694 TBC1D32Q96NH3 1257 aa17.46■□□□□ 0.38
GPC1-208ENST00000469694 SSH1Q8WYL5 1049 aa17.45■□□□□ 0.38
GPC1-208ENST00000469694 ESPNB1AK53 854 aa17.44■□□□□ 0.38
GPC1-208ENST00000469694 LMOD2Q6P5Q4 547 aa17.44■□□□□ 0.38
GPC1-208ENST00000469694 SMC4Q9NTJ3 1288 aa17.44■□□□□ 0.38
GPC1-208ENST00000469694 UPF2Q9HAU5 1272 aaKnown RBP17.44■□□□□ 0.38
GPC1-208ENST00000469694 TRAK2O60296 914 aa17.43■□□□□ 0.38
GPC1-208ENST00000469694 IL16Q14005 1332 aa17.43■□□□□ 0.38
GPC1-208ENST00000469694 FLT4P35916 1363 aa17.43■□□□□ 0.38
GPC1-208ENST00000469694 EYA1Q99502 592 aa17.42■□□□□ 0.38
GPC1-208ENST00000469694 PDE3AQ14432 1141 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms