RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 DAXXQ9UER7 740 aaPredicted RBP18.69■□□□□ 0.58
CBWD3-205ENST00000469687 KIF16BQ96L93 1317 aa18.68■□□□□ 0.58
CBWD3-205ENST00000469687 FAM83GA6ND36 823 aa18.67■□□□□ 0.58
CBWD3-205ENST00000469687 ELL2O00472 640 aaPredicted RBP18.67■□□□□ 0.58
CBWD3-205ENST00000469687 ALDH1L2Q3SY69 923 aa18.67■□□□□ 0.58
CBWD3-205ENST00000469687 SLC26A8Q96RN1 970 aa18.67■□□□□ 0.58
CBWD3-205ENST00000469687 BCL11AQ9H165 835 aa18.67■□□□□ 0.58
CBWD3-205ENST00000469687 ZBTB40Q9NUA8 1239 aa18.67■□□□□ 0.58
CBWD3-205ENST00000469687 NRKQ7Z2Y5 1582 aa18.67■□□□□ 0.58
CBWD3-205ENST00000469687 PLPPR3Q6T4P5 718 aa18.66■□□□□ 0.58
CBWD3-205ENST00000469687 MBIPQ9NS73 344 aa18.66■□□□□ 0.58
CBWD3-205ENST00000469687 TOPAZ1Q8N9V7 1692 aa18.66■□□□□ 0.58
CBWD3-205ENST00000469687 VAMP4O75379 141 aa18.66■□□□□ 0.58
CBWD3-205ENST00000469687 HDAC1Q13547 482 aaPredicted RBP18.66■□□□□ 0.58
CBWD3-205ENST00000469687 ACEP12821 1306 aa18.65■□□□□ 0.58
CBWD3-205ENST00000469687 DCTN1Q14203 1278 aa18.65■□□□□ 0.58
CBWD3-205ENST00000469687 ZNF692Q9BU19 519 aaPredicted RBP18.65■□□□□ 0.58
CBWD3-205ENST00000469687 PTPRUQ92729 1446 aa18.65■□□□□ 0.58
CBWD3-205ENST00000469687 IPO8O15397 1037 aaKnown RBP18.65■□□□□ 0.58
CBWD3-205ENST00000469687 AEBP1Q8IUX7 1158 aa18.65■□□□□ 0.58
CBWD3-205ENST00000469687 TTC21BQ7Z4L5 1316 aa18.64■□□□□ 0.57
CBWD3-205ENST00000469687 ZNF853P0CG23 659 aa18.64■□□□□ 0.57
CBWD3-205ENST00000469687 IFT57Q9NWB7 429 aa18.64■□□□□ 0.57
CBWD3-205ENST00000469687 PLEKHG1Q9ULL1 1385 aa18.64■□□□□ 0.57
CBWD3-205ENST00000469687 USP35Q9P2H5 1018 aa18.64■□□□□ 0.57
CBWD3-205ENST00000469687 GNAI1P63096 354 aa18.63■□□□□ 0.57
CBWD3-205ENST00000469687 NFKBIBQ15653 356 aa18.63■□□□□ 0.57
CBWD3-205ENST00000469687 MRPL50Q8N5N7 158 aaKnown RBP18.62■□□□□ 0.57
CBWD3-205ENST00000469687 EIF4A2Q14240 407 aaKnown RBP18.62■□□□□ 0.57
CBWD3-205ENST00000469687 SMC5Q8IY18 1101 aa18.62■□□□□ 0.57
CBWD3-205ENST00000469687 PEAK1Q9H792 1746 aa18.61■□□□□ 0.57
CBWD3-205ENST00000469687 BRPF1P55201 1214 aaPredicted RBP18.61■□□□□ 0.57
CBWD3-205ENST00000469687 C8orf58Q8NAV2 365 aa18.61■□□□□ 0.57
CBWD3-205ENST00000469687 OVOS2A0A0J9YW53 1432 aa18.61■□□□□ 0.57
CBWD3-205ENST00000469687 OVOS2Q6IE36 1432 aa18.61■□□□□ 0.57
CBWD3-205ENST00000469687 SOX12O15370 315 aa18.61■□□□□ 0.57
CBWD3-205ENST00000469687 CALD1Q05682 793 aaKnown RBP18.61■□□□□ 0.57
CBWD3-205ENST00000469687 SULT6B1Q6IMI4 303 aa18.6■□□□□ 0.57
CBWD3-205ENST00000469687 CFAP44Q96MT7 982 aa18.6■□□□□ 0.57
CBWD3-205ENST00000469687 USP6P35125 1406 aa18.6■□□□□ 0.57
CBWD3-205ENST00000469687 RGPD8O14715 1765 aaPredicted RBP18.59■□□□□ 0.57
CBWD3-205ENST00000469687 ZNF428Q96B54 188 aa18.59■□□□□ 0.57
CBWD3-205ENST00000469687 C1orf115Q9H7X2 142 aa18.59■□□□□ 0.57
CBWD3-205ENST00000469687 PLEKHG3A1L390 1219 aa18.59■□□□□ 0.57
CBWD3-205ENST00000469687 TWISTNBQ3B726 338 aaPredicted RBP18.59■□□□□ 0.57
CBWD3-205ENST00000469687 PTCH1Q13635 1447 aa18.59■□□□□ 0.57
CBWD3-205ENST00000469687 NALCNQ8IZF0 1738 aa18.59■□□□□ 0.57
CBWD3-205ENST00000469687 HSP90AB2PQ58FF8 381 aa18.58■□□□□ 0.57
CBWD3-205ENST00000469687 TBC1D32Q96NH3 1257 aa18.58■□□□□ 0.57
CBWD3-205ENST00000469687 ZBTB7BO15156 539 aaPredicted RBP18.57■□□□□ 0.56
CBWD3-205ENST00000469687 AMOTL2Q9Y2J4 779 aa18.57■□□□□ 0.56
CBWD3-205ENST00000469687 LMOD3Q0VAK6 560 aa18.57■□□□□ 0.56
CBWD3-205ENST00000469687 LNPKQ9C0E8 428 aa18.56■□□□□ 0.56
CBWD3-205ENST00000469687 KRT24Q2M2I5 525 aa18.55■□□□□ 0.56
CBWD3-205ENST00000469687 UPF2Q9HAU5 1272 aaKnown RBP18.55■□□□□ 0.56
CBWD3-205ENST00000469687 EID1Q9Y6B2 187 aa18.55■□□□□ 0.56
CBWD3-205ENST00000469687 PIK3R4Q99570 1358 aa18.55■□□□□ 0.56
CBWD3-205ENST00000469687 ARHGAP45Q92619 1136 aa18.55■□□□□ 0.56
CBWD3-205ENST00000469687 RGPD1P0DJD0 1748 aa18.54■□□□□ 0.56
CBWD3-205ENST00000469687 SSH2Q76I76 1423 aa18.54■□□□□ 0.56
CBWD3-205ENST00000469687 ABCC4O15439 1325 aa18.54■□□□□ 0.56
CBWD3-205ENST00000469687 SLIT1O75093 1534 aa18.54■□□□□ 0.56
CBWD3-205ENST00000469687 FRAT2O75474 233 aaPredicted RBP18.54■□□□□ 0.56
CBWD3-205ENST00000469687 NUCB1Q02818 461 aa18.54■□□□□ 0.56
CBWD3-205ENST00000469687 MCM10Q7L590 875 aa18.54■□□□□ 0.56
CBWD3-205ENST00000469687 RIMS1Q86UR5 1692 aaKnown RBP18.53■□□□□ 0.56
CBWD3-205ENST00000469687 USP31Q70CQ4 1352 aa18.53■□□□□ 0.56
CBWD3-205ENST00000469687 FER1L4A9Z1Z3 1794 aa18.53■□□□□ 0.56
CBWD3-205ENST00000469687 ARHGAP23Q9P227 1491 aa18.53■□□□□ 0.56
CBWD3-205ENST00000469687 MFAP1P55081 439 aaKnown RBP18.52■□□□□ 0.56
CBWD3-205ENST00000469687 FMN2Q9NZ56 1722 aa18.51■□□□□ 0.55
CBWD3-205ENST00000469687 SIRT2Q8IXJ6 389 aa18.51■□□□□ 0.55
CBWD3-205ENST00000469687 SLKQ9H2G2 1235 aaPredicted RBP18.51■□□□□ 0.55
CBWD3-205ENST00000469687 DIP2AQ14689 1571 aa18.51■□□□□ 0.55
CBWD3-205ENST00000469687 BECN1Q14457 450 aa18.51■□□□□ 0.55
CBWD3-205ENST00000469687 CHD1LQ86WJ1 897 aa18.51■□□□□ 0.55
CBWD3-205ENST00000469687 MAP3K19Q56UN5 1328 aa18.5■□□□□ 0.55
CBWD3-205ENST00000469687 TBC1D2Q9BYX2 928 aa18.5■□□□□ 0.55
CBWD3-205ENST00000469687 TBX22Q9Y458 520 aa18.49■□□□□ 0.55
CBWD3-205ENST00000469687 ANKRD45Q5TZF3 282 aa18.48■□□□□ 0.55
CBWD3-205ENST00000469687 FOXO3O43524 673 aa18.48■□□□□ 0.55
CBWD3-205ENST00000469687 C22orf23Q9BZE7 217 aa18.48■□□□□ 0.55
CBWD3-205ENST00000469687 PIK3C2AO00443 1686 aa18.47■□□□□ 0.55
CBWD3-205ENST00000469687 NGDNQ8NEJ9 315 aaKnown RBP18.47■□□□□ 0.55
CBWD3-205ENST00000469687 CHL1O00533 1208 aa18.47■□□□□ 0.55
CBWD3-205ENST00000469687 API5Q9BZZ5 524 aaKnown RBP18.46■□□□□ 0.55
CBWD3-205ENST00000469687 MIS18AQ9NYP9 233 aa18.46■□□□□ 0.55
CBWD3-205ENST00000469687 RGS12O14924 1447 aa18.45■□□□□ 0.54
CBWD3-205ENST00000469687 TTC21AQ8NDW8 1320 aa18.45■□□□□ 0.54
CBWD3-205ENST00000469687 ANTXR1Q9H6X2 564 aa18.45■□□□□ 0.54
CBWD3-205ENST00000469687 CEP170BQ9Y4F5 1589 aaPredicted RBP18.45■□□□□ 0.54
CBWD3-205ENST00000469687 XRN1Q8IZH2 1706 aaKnown RBP18.44■□□□□ 0.54
CBWD3-205ENST00000469687 MTHFSDQ2M296 383 aaKnown RBP18.44■□□□□ 0.54
CBWD3-205ENST00000469687 GCC1Q96CN9 775 aa18.44■□□□□ 0.54
CBWD3-205ENST00000469687 CRB1P82279 1406 aa18.44■□□□□ 0.54
CBWD3-205ENST00000469687 KCNA6P17658 529 aa18.44■□□□□ 0.54
CBWD3-205ENST00000469687 NUTM2GQ5VZR2 741 aa18.44■□□□□ 0.54
CBWD3-205ENST00000469687 THEMISQ8N1K5 641 aaPredicted RBP18.44■□□□□ 0.54
CBWD3-205ENST00000469687 SPRYD3Q8NCJ5 442 aa18.44■□□□□ 0.54
CBWD3-205ENST00000469687 ARHGEF10O15013 1369 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms