RNA–Protein interactions for RNA: ENST00000468864.1

TRAPPC10-207, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 3,909 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-207ENST00000468864 KDM5BQ9UGL1 1544 aa12.67□□□□□ -0.38
TRAPPC10-207ENST00000468864 PRIM1P49642 420 aaKnown RBP12.67□□□□□ -0.38
TRAPPC10-207ENST00000468864 TTLL5Q6EMB2 1281 aa12.67□□□□□ -0.38
TRAPPC10-207ENST00000468864 PDILTQ8N807 584 aa12.67□□□□□ -0.38
TRAPPC10-207ENST00000468864 LETM1O95202 739 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC10-207ENST00000468864 GNAI3P08754 354 aa12.67□□□□□ -0.38
TRAPPC10-207ENST00000468864 GPS2Q13227 327 aa12.67□□□□□ -0.38
TRAPPC10-207ENST00000468864 NOC3LQ8WTT2 800 aaKnown RBP12.67□□□□□ -0.38
TRAPPC10-207ENST00000468864 CHMP4AQ9BY43 222 aa12.67□□□□□ -0.38
TRAPPC10-207ENST00000468864 LRRCC1Q9C099 1032 aa12.67□□□□□ -0.38
TRAPPC10-207ENST00000468864 EPRSP07814 1512 aaKnown RBP12.66□□□□□ -0.38
TRAPPC10-207ENST00000468864 RRS1Q15050 365 aaKnown RBP12.66□□□□□ -0.38
TRAPPC10-207ENST00000468864 CWC27Q6UX04 472 aaKnown RBP12.66□□□□□ -0.38
TRAPPC10-207ENST00000468864 CNTROBQ8N137 903 aa12.66□□□□□ -0.38
TRAPPC10-207ENST00000468864 IFT140Q96RY7 1462 aa12.66□□□□□ -0.38
TRAPPC10-207ENST00000468864 TROQ12816 1431 aaPredicted RBP12.66□□□□□ -0.38
TRAPPC10-207ENST00000468864 FBLN1P23142 703 aa12.66□□□□□ -0.38
TRAPPC10-207ENST00000468864 PPP4R3BQ5MIZ7 849 aa12.66□□□□□ -0.38
TRAPPC10-207ENST00000468864 ARGLU1Q9NWB6 273 aaPredicted RBP12.66□□□□□ -0.38
TRAPPC10-207ENST00000468864 CGNQ9P2M7 1197 aaKnown RBP12.66□□□□□ -0.38
TRAPPC10-207ENST00000468864 DMRT2Q9Y5R5 561 aa12.66□□□□□ -0.38
TRAPPC10-207ENST00000468864 PER1O15534 1290 aaPredicted RBP12.66□□□□□ -0.38
TRAPPC10-207ENST00000468864 FSD1Q9BTV5 496 aa12.66□□□□□ -0.38
TRAPPC10-207ENST00000468864 GPRASP1Q5JY77 1395 aa12.65□□□□□ -0.38
TRAPPC10-207ENST00000468864 CCDC66A2RUB6 948 aa12.65□□□□□ -0.38
TRAPPC10-207ENST00000468864 KINO60870 393 aaKnown RBP12.65□□□□□ -0.38
TRAPPC10-207ENST00000468864 HCLS1P14317 486 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC10-207ENST00000468864 BMP2KLQ5H9B9 411 aa12.65□□□□□ -0.38
TRAPPC10-207ENST00000468864 C16orf45Q96MC5 204 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC10-207ENST00000468864 TTC12Q9H892 705 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC10-207ENST00000468864 CCDC34Q96HJ3 373 aa12.65□□□□□ -0.38
TRAPPC10-207ENST00000468864 NUTM1Q86Y26 1132 aa12.65□□□□□ -0.39
TRAPPC10-207ENST00000468864 STK11IPQ8N1F8 1099 aa12.65□□□□□ -0.39
TRAPPC10-207ENST00000468864 F6X3S4 739 aa12.64□□□□□ -0.39
TRAPPC10-207ENST00000468864 KRT85P78386 507 aa12.64□□□□□ -0.39
TRAPPC10-207ENST00000468864 CCDC83Q8IWF9 413 aa12.64□□□□□ -0.39
TRAPPC10-207ENST00000468864 CKAP2LQ8IYA6 745 aa12.64□□□□□ -0.39
TRAPPC10-207ENST00000468864 CROCC2H7BZ55 1655 aa12.64□□□□□ -0.39
TRAPPC10-207ENST00000468864 KDM2BQ8NHM5 1336 aa12.64□□□□□ -0.39
TRAPPC10-207ENST00000468864 ADCY5O95622 1261 aa12.64□□□□□ -0.39
TRAPPC10-207ENST00000468864 JAKMIP1Q96N16 626 aaKnown RBP12.64□□□□□ -0.39
TRAPPC10-207ENST00000468864 NEUROD6Q96NK8 337 aa12.64□□□□□ -0.39
TRAPPC10-207ENST00000468864 APPP05067 770 aa12.63□□□□□ -0.39
TRAPPC10-207ENST00000468864 ATP2B1P20020 1258 aa12.63□□□□□ -0.39
TRAPPC10-207ENST00000468864 PARD3Q8TEW0 1356 aa12.63□□□□□ -0.39
TRAPPC10-207ENST00000468864 SUPT6HQ7KZ85 1726 aaKnown RBP12.63□□□□□ -0.39
TRAPPC10-207ENST00000468864 PDCP20941 246 aa12.63□□□□□ -0.39
TRAPPC10-207ENST00000468864 SYNE3Q6ZMZ3 975 aa12.63□□□□□ -0.39
TRAPPC10-207ENST00000468864 NUP62CLQ9H1M0 184 aa12.63□□□□□ -0.39
TRAPPC10-207ENST00000468864 CYP46A1Q9Y6A2 500 aa12.63□□□□□ -0.39
TRAPPC10-207ENST00000468864 POLR1AO95602 1720 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC10-207ENST00000468864 C16orf71Q8IYS4 520 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC10-207ENST00000468864 UGGT2Q9NYU1 1516 aa12.63□□□□□ -0.39
TRAPPC10-207ENST00000468864 RPAP2Q8IXW5 612 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC10-207ENST00000468864 NEXNQ0ZGT2 675 aa12.62□□□□□ -0.39
TRAPPC10-207ENST00000468864 ZGPATQ8N5A5 531 aaKnown RBP12.62□□□□□ -0.39
TRAPPC10-207ENST00000468864 MCM10Q7L590 875 aa12.62□□□□□ -0.39
TRAPPC10-207ENST00000468864 TRMT1Q9NXH9 659 aaKnown RBP12.62□□□□□ -0.39
TRAPPC10-207ENST00000468864 HSP90AB4PQ58FF6 505 aa12.61□□□□□ -0.39
TRAPPC10-207ENST00000468864 DDX11Q96FC9 970 aa12.61□□□□□ -0.39
TRAPPC10-207ENST00000468864 TESK2Q96S53 571 aa12.61□□□□□ -0.39
TRAPPC10-207ENST00000468864 SPATA32Q96LK8 384 aa12.61□□□□□ -0.39
TRAPPC10-207ENST00000468864 SIL1Q9H173 461 aa12.61□□□□□ -0.39
TRAPPC10-207ENST00000468864 TFIP11Q9UBB9 837 aaKnown RBP12.61□□□□□ -0.39
TRAPPC10-207ENST00000468864 ADGRF5Q8IZF2 1346 aa12.61□□□□□ -0.39
TRAPPC10-207ENST00000468864 PLEKHH2Q8IVE3 1493 aa12.61□□□□□ -0.39
TRAPPC10-207ENST00000468864 DYNC1I1O14576 645 aa12.61□□□□□ -0.39
TRAPPC10-207ENST00000468864 CASTP20810 708 aaKnown RBP12.61□□□□□ -0.39
TRAPPC10-207ENST00000468864 ME1P48163 572 aa12.61□□□□□ -0.39
TRAPPC10-207ENST00000468864 ZKSCAN5Q9Y2L8 839 aa12.61□□□□□ -0.39
TRAPPC10-207ENST00000468864 MAGI3Q5TCQ9 1506 aa12.6□□□□□ -0.39
TRAPPC10-207ENST00000468864 SRGAP3O43295 1099 aa12.6□□□□□ -0.39
TRAPPC10-207ENST00000468864 OFD1O75665 1012 aa12.6□□□□□ -0.39
TRAPPC10-207ENST00000468864 FCHSD2O94868 740 aa12.6□□□□□ -0.39
TRAPPC10-207ENST00000468864 NFE2L2Q16236 605 aa12.6□□□□□ -0.39
TRAPPC10-207ENST00000468864 GIMAP6Q6P9H5 292 aa12.6□□□□□ -0.39
TRAPPC10-207ENST00000468864 CPLX2Q6PUV4 134 aaKnown RBP12.6□□□□□ -0.39
TRAPPC10-207ENST00000468864 CDK19Q9BWU1 502 aa12.6□□□□□ -0.39
TRAPPC10-207ENST00000468864 PSMA5P28066 241 aa12.6□□□□□ -0.39
TRAPPC10-207ENST00000468864 NUCB1Q02818 461 aa12.6□□□□□ -0.39
TRAPPC10-207ENST00000468864 HDGFL1Q5TGJ6 251 aa12.6□□□□□ -0.39
TRAPPC10-207ENST00000468864 DNAJC2Q99543 621 aaKnown RBP12.6□□□□□ -0.39
TRAPPC10-207ENST00000468864 RAB3GAP1Q15042 981 aa12.59□□□□□ -0.39
TRAPPC10-207ENST00000468864 MAP3K11Q16584 847 aa12.59□□□□□ -0.39
TRAPPC10-207ENST00000468864 TSR1Q2NL82 804 aaKnown RBP12.59□□□□□ -0.39
TRAPPC10-207ENST00000468864 CCDC30Q5VVM6 783 aa12.59□□□□□ -0.39
TRAPPC10-207ENST00000468864 NAT10Q9H0A0 1025 aaKnown RBP12.59□□□□□ -0.39
TRAPPC10-207ENST00000468864 TCOF1Q13428 1488 aaKnown RBP12.59□□□□□ -0.39
TRAPPC10-207ENST00000468864 HSP90B2PQ58FF3 399 aa12.59□□□□□ -0.39
TRAPPC10-207ENST00000468864 C1orf141Q5JVX7 400 aa12.59□□□□□ -0.39
TRAPPC10-207ENST00000468864 CCDC183Q5T5S1 534 aa12.59□□□□□ -0.39
TRAPPC10-207ENST00000468864 SCAPERQ9BY12 1400 aa12.59□□□□□ -0.39
TRAPPC10-207ENST00000468864 PDRG1Q9NUG6 133 aa12.59□□□□□ -0.39
TRAPPC10-207ENST00000468864 TPM1P09493 284 aa12.59□□□□□ -0.39
TRAPPC10-207ENST00000468864 TNNT1P13805 278 aa12.58□□□□□ -0.39
TRAPPC10-207ENST00000468864 HDAC1Q13547 482 aaPredicted RBP12.58□□□□□ -0.39
TRAPPC10-207ENST00000468864 LRSAM1Q6UWE0 723 aa12.58□□□□□ -0.39
TRAPPC10-207ENST00000468864 TMX3Q96JJ7 454 aa12.58□□□□□ -0.39
TRAPPC10-207ENST00000468864 FAM83GA6ND36 823 aa12.58□□□□□ -0.4
TRAPPC10-207ENST00000468864 DTNBO60941 627 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms