RNA–Protein interactions for RNA: ENST00000468619.5

SHANK2-214, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 2

Gene SHANK2, Length 2,775 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-214ENST00000468619 LTKP29376 864 aa16.62■□□□□ 0.25
SHANK2-214ENST00000468619 YTHDC2Q9H6S0 1430 aaKnown RBP16.62■□□□□ 0.25
SHANK2-214ENST00000468619 DMTNQ08495 405 aa16.61■□□□□ 0.25
SHANK2-214ENST00000468619 JARID2Q92833 1246 aaPredicted RBP16.61■□□□□ 0.25
SHANK2-214ENST00000468619 ZKSCAN5Q9Y2L8 839 aa16.61■□□□□ 0.25
SHANK2-214ENST00000468619 MCTP1Q6DN14 999 aa16.61■□□□□ 0.25
SHANK2-214ENST00000468619 NGEFQ8N5V2 710 aa16.61■□□□□ 0.25
SHANK2-214ENST00000468619 GAS2L2Q8NHY3 880 aa16.61■□□□□ 0.25
SHANK2-214ENST00000468619 HDGFP51858 240 aaKnown RBP16.6■□□□□ 0.25
SHANK2-214ENST00000468619 ZSCAN23Q3MJ62 389 aa16.6■□□□□ 0.25
SHANK2-214ENST00000468619 KIF2CQ99661 725 aa16.6■□□□□ 0.25
SHANK2-214ENST00000468619 K7ELQ4 463 aaPredicted RBP16.6■□□□□ 0.25
SHANK2-214ENST00000468619 ZSCAN20P17040 1043 aaPredicted RBP16.6■□□□□ 0.25
SHANK2-214ENST00000468619 TXNDC2Q86VQ3 553 aa16.6■□□□□ 0.25
SHANK2-214ENST00000468619 CCDC94Q9BW85 323 aaPredicted RBP16.6■□□□□ 0.25
SHANK2-214ENST00000468619 CEP170BQ9Y4F5 1589 aaPredicted RBP16.6■□□□□ 0.25
SHANK2-214ENST00000468619 PRIM1P49642 420 aaKnown RBP16.6■□□□□ 0.25
SHANK2-214ENST00000468619 SASS6Q6UVJ0 657 aa16.6■□□□□ 0.25
SHANK2-214ENST00000468619 PDLIM2Q96JY6 352 aa16.6■□□□□ 0.25
SHANK2-214ENST00000468619 IBTKQ9P2D0 1353 aaPredicted RBP16.59■□□□□ 0.25
SHANK2-214ENST00000468619 ZNF445P59923 1031 aa16.59■□□□□ 0.25
SHANK2-214ENST00000468619 CSPP1Q1MSJ5 1256 aa16.59■□□□□ 0.25
SHANK2-214ENST00000468619 DZIP1LQ8IYY4 767 aaKnown RBP16.59■□□□□ 0.25
SHANK2-214ENST00000468619 TCP11L2Q8N4U5 519 aa16.59■□□□□ 0.25
SHANK2-214ENST00000468619 MYOM1P52179 1685 aa16.58■□□□□ 0.25
SHANK2-214ENST00000468619 ZKSCAN2Q63HK3 967 aa16.58■□□□□ 0.25
SHANK2-214ENST00000468619 TSC1Q92574 1164 aa16.58■□□□□ 0.25
SHANK2-214ENST00000468619 LNPKQ9C0E8 428 aa16.58■□□□□ 0.25
SHANK2-214ENST00000468619 METP08581 1390 aa16.58■□□□□ 0.24
SHANK2-214ENST00000468619 TNNT2P45379 298 aaPredicted RBP16.57■□□□□ 0.24
SHANK2-214ENST00000468619 CDCA8Q53HL2 280 aa16.57■□□□□ 0.24
SHANK2-214ENST00000468619 UTP14CQ5TAP6 766 aaKnown RBP16.57■□□□□ 0.24
SHANK2-214ENST00000468619 ITPRIPQ8IWB1 547 aa16.57■□□□□ 0.24
SHANK2-214ENST00000468619 THEMISQ8N1K5 641 aaPredicted RBP16.57■□□□□ 0.24
SHANK2-214ENST00000468619 SBNO2Q9Y2G9 1366 aa16.57■□□□□ 0.24
SHANK2-214ENST00000468619 PRAM1Q96QH2 718 aa16.57■□□□□ 0.24
SHANK2-214ENST00000468619 SLIT1O75093 1534 aa16.57■□□□□ 0.24
SHANK2-214ENST00000468619 CBX1P83916 185 aa16.56■□□□□ 0.24
SHANK2-214ENST00000468619 RBM27Q9P2N5 1060 aaKnown RBP16.56■□□□□ 0.24
SHANK2-214ENST00000468619 EID1Q9Y6B2 187 aa16.56■□□□□ 0.24
SHANK2-214ENST00000468619 ARHGAP23Q9P227 1491 aa16.56■□□□□ 0.24
SHANK2-214ENST00000468619 HDAC1Q13547 482 aaPredicted RBP16.55■□□□□ 0.24
SHANK2-214ENST00000468619 AK9Q5TCS8 1911 aa16.55■□□□□ 0.24
SHANK2-214ENST00000468619 BBXQ8WY36 941 aaPredicted RBP16.55■□□□□ 0.24
SHANK2-214ENST00000468619 SETD1BQ9UPS6 1966 aaKnown RBP16.55■□□□□ 0.24
SHANK2-214ENST00000468619 SLC26A8Q96RN1 970 aa16.55■□□□□ 0.24
SHANK2-214ENST00000468619 PLEKHG1Q9ULL1 1385 aa16.54■□□□□ 0.24
SHANK2-214ENST00000468619 ADAMTS13Q76LX8 1427 aa16.54■□□□□ 0.24
SHANK2-214ENST00000468619 MINK1Q8N4C8 1332 aaPredicted RBP16.54■□□□□ 0.24
SHANK2-214ENST00000468619 TULP4Q9NRJ4 1543 aa16.54■□□□□ 0.24
SHANK2-214ENST00000468619 PDE4CQ08493 712 aa16.54■□□□□ 0.24
SHANK2-214ENST00000468619 DNTTIP2Q5QJE6 756 aaKnown RBP16.54■□□□□ 0.24
SHANK2-214ENST00000468619 RUNDC1Q96C34 613 aa16.54■□□□□ 0.24
SHANK2-214ENST00000468619 ZNF142P52746 1687 aaPredicted RBP16.54■□□□□ 0.24
SHANK2-214ENST00000468619 CLEC17AQ6ZS10 378 aa16.53■□□□□ 0.24
SHANK2-214ENST00000468619 WAPLQ7Z5K2 1190 aa16.53■□□□□ 0.24
SHANK2-214ENST00000468619 LMBRD1Q9NUN5 540 aa16.53■□□□□ 0.24
SHANK2-214ENST00000468619 SLC24A1O60721 1099 aa16.53■□□□□ 0.24
SHANK2-214ENST00000468619 NPC1L1Q9UHC9 1359 aa16.53■□□□□ 0.24
SHANK2-214ENST00000468619 TRIM27P14373 513 aa16.52■□□□□ 0.24
SHANK2-214ENST00000468619 PKP1Q13835 747 aa16.52■□□□□ 0.24
SHANK2-214ENST00000468619 RNF214Q8ND24 703 aa16.52■□□□□ 0.24
SHANK2-214ENST00000468619 CARD14Q9BXL6 1004 aa16.52■□□□□ 0.24
SHANK2-214ENST00000468619 SMC4Q9NTJ3 1288 aa16.52■□□□□ 0.24
SHANK2-214ENST00000468619 PRPF40AO75400 957 aaKnown RBP16.52■□□□□ 0.23
SHANK2-214ENST00000468619 FAM177BA6PVY3 158 aa16.51■□□□□ 0.23
SHANK2-214ENST00000468619 WDR63Q8IWG1 891 aa16.51■□□□□ 0.23
SHANK2-214ENST00000468619 CCDC39Q9UFE4 941 aa16.51■□□□□ 0.23
SHANK2-214ENST00000468619 MCM5P33992 734 aa16.51■□□□□ 0.23
SHANK2-214ENST00000468619 PPP4R3BQ5MIZ7 849 aa16.51■□□□□ 0.23
SHANK2-214ENST00000468619 MPNDQ8N594 471 aa16.51■□□□□ 0.23
SHANK2-214ENST00000468619 TSR2Q969E8 191 aaKnown RBP16.51■□□□□ 0.23
SHANK2-214ENST00000468619 EVC2Q86UK5 1308 aa16.5■□□□□ 0.23
SHANK2-214ENST00000468619 SYCE3A1L190 88 aa16.5■□□□□ 0.23
SHANK2-214ENST00000468619 CHAMP1Q96JM3 812 aa16.5■□□□□ 0.23
SHANK2-214ENST00000468619 CABP2Q9NPB3 220 aa16.5■□□□□ 0.23
SHANK2-214ENST00000468619 DDX19BQ9UMR2 479 aa16.5■□□□□ 0.23
SHANK2-214ENST00000468619 PTMAP06454 111 aaKnown RBP16.49■□□□□ 0.23
SHANK2-214ENST00000468619 NUCB1Q02818 461 aa16.49■□□□□ 0.23
SHANK2-214ENST00000468619 GPT2Q8TD30 523 aa16.49■□□□□ 0.23
SHANK2-214ENST00000468619 ABCC11Q96J66 1382 aa16.49■□□□□ 0.23
SHANK2-214ENST00000468619 DLC1Q96QB1 1528 aa16.49■□□□□ 0.23
SHANK2-214ENST00000468619 ZNF710Q8N1W2 664 aa16.49■□□□□ 0.23
SHANK2-214ENST00000468619 CHD1LQ86WJ1 897 aa16.49■□□□□ 0.23
SHANK2-214ENST00000468619 KNDC1Q76NI1 1749 aa16.48■□□□□ 0.23
SHANK2-214ENST00000468619 TBC1D9Q6ZT07 1266 aa16.48■□□□□ 0.23
SHANK2-214ENST00000468619 MYRIPQ8NFW9 859 aa16.48■□□□□ 0.23
SHANK2-214ENST00000468619 PHF23Q9BUL5 403 aaPredicted RBP16.48■□□□□ 0.23
SHANK2-214ENST00000468619 KIF16BQ96L93 1317 aa16.48■□□□□ 0.23
SHANK2-214ENST00000468619 GTF2E1P29083 439 aaPredicted RBP16.48■□□□□ 0.23
SHANK2-214ENST00000468619 ATP2B3Q16720 1220 aa16.48■□□□□ 0.23
SHANK2-214ENST00000468619 SRPK2P78362 688 aaKnown RBP16.47■□□□□ 0.23
SHANK2-214ENST00000468619 TMEM57Q8N5G2 664 aa16.47■□□□□ 0.23
SHANK2-214ENST00000468619 MED14O60244 1454 aa16.47■□□□□ 0.23
SHANK2-214ENST00000468619 KIAA2012Q0VF49 1180 aa16.47■□□□□ 0.23
SHANK2-214ENST00000468619 BMP2KLQ5H9B9 411 aa16.47■□□□□ 0.23
SHANK2-214ENST00000468619 SLC12A5Q9H2X9 1139 aa16.47■□□□□ 0.23
SHANK2-214ENST00000468619 TMEM63CQ9P1W3 806 aa16.47■□□□□ 0.23
SHANK2-214ENST00000468619 POLR3AO14802 1390 aaPredicted RBP16.46■□□□□ 0.23
SHANK2-214ENST00000468619 SSH1Q8WYL5 1049 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms