RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 FCHSD2O94868 740 aa19.93■□□□□ 0.78
TSPAN4-211ENST00000468468 SIRT1Q96EB6 747 aa19.93■□□□□ 0.78
TSPAN4-211ENST00000468468 CPS1P31327 1500 aa19.93■□□□□ 0.78
TSPAN4-211ENST00000468468 C3P01024 1663 aa19.92■□□□□ 0.78
TSPAN4-211ENST00000468468 PLEKHG1Q9ULL1 1385 aa19.92■□□□□ 0.78
TSPAN4-211ENST00000468468 CPSF1Q10570 1443 aaKnown RBP19.91■□□□□ 0.78
TSPAN4-211ENST00000468468 SPRYD3Q8NCJ5 442 aa19.91■□□□□ 0.78
TSPAN4-211ENST00000468468 ZRANB1Q9UGI0 708 aa19.91■□□□□ 0.78
TSPAN4-211ENST00000468468 PRKAR2BP31323 418 aa19.91■□□□□ 0.78
TSPAN4-211ENST00000468468 ALDH1L2Q3SY69 923 aa19.91■□□□□ 0.78
TSPAN4-211ENST00000468468 NME9Q86XW9 330 aa19.91■□□□□ 0.78
TSPAN4-211ENST00000468468 PRR36Q9H6K5 1346 aa19.9■□□□□ 0.78
TSPAN4-211ENST00000468468 CCDC61Q9Y6R9 512 aa19.9■□□□□ 0.78
TSPAN4-211ENST00000468468 NUTM2FA1L443 756 aa19.89■□□□□ 0.77
TSPAN4-211ENST00000468468 RSPH6AQ9H0K4 717 aa19.89■□□□□ 0.77
TSPAN4-211ENST00000468468 EID1Q9Y6B2 187 aa19.89■□□□□ 0.77
TSPAN4-211ENST00000468468 POLKQ9UBT6 870 aa19.89■□□□□ 0.77
TSPAN4-211ENST00000468468 LRRC7Q96NW7 1537 aa19.88■□□□□ 0.77
TSPAN4-211ENST00000468468 FER1L4A9Z1Z3 1794 aa19.88■□□□□ 0.77
TSPAN4-211ENST00000468468 EDC4Q6P2E9 1401 aaKnown RBP19.88■□□□□ 0.77
TSPAN4-211ENST00000468468 PTPRUQ92729 1446 aa19.87■□□□□ 0.77
TSPAN4-211ENST00000468468 NUCB1Q02818 461 aa19.86■□□□□ 0.77
TSPAN4-211ENST00000468468 CDC42BPGQ6DT37 1551 aa19.85■□□□□ 0.77
TSPAN4-211ENST00000468468 HMOX1P09601 288 aa19.85■□□□□ 0.77
TSPAN4-211ENST00000468468 EMILIN1Q9Y6C2 1016 aa19.85■□□□□ 0.77
TSPAN4-211ENST00000468468 PHACTR3Q96KR7 559 aa19.85■□□□□ 0.77
TSPAN4-211ENST00000468468 LNPKQ9C0E8 428 aa19.85■□□□□ 0.77
TSPAN4-211ENST00000468468 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.85■□□□□ 0.77
TSPAN4-211ENST00000468468 ZNF428Q96B54 188 aa19.84■□□□□ 0.77
TSPAN4-211ENST00000468468 NFE2L2Q16236 605 aa19.84■□□□□ 0.77
TSPAN4-211ENST00000468468 THUMPD2Q9BTF0 503 aaKnown RBP19.83■□□□□ 0.77
TSPAN4-211ENST00000468468 BRPF1P55201 1214 aaPredicted RBP19.83■□□□□ 0.77
TSPAN4-211ENST00000468468 CHD1LQ86WJ1 897 aa19.83■□□□□ 0.77
TSPAN4-211ENST00000468468 AMOTL2Q9Y2J4 779 aa19.83■□□□□ 0.77
TSPAN4-211ENST00000468468 ARHGAP23Q9P227 1491 aa19.83■□□□□ 0.76
TSPAN4-211ENST00000468468 SLIT1O75093 1534 aa19.83■□□□□ 0.76
TSPAN4-211ENST00000468468 VAMP4O75379 141 aa19.82■□□□□ 0.76
TSPAN4-211ENST00000468468 CHMP5Q9NZZ3 219 aa19.82■□□□□ 0.76
TSPAN4-211ENST00000468468 THEMISQ8N1K5 641 aaPredicted RBP19.81■□□□□ 0.76
TSPAN4-211ENST00000468468 CALD1Q05682 793 aaKnown RBP19.81■□□□□ 0.76
TSPAN4-211ENST00000468468 HSCBQ8IWL3 235 aa19.81■□□□□ 0.76
TSPAN4-211ENST00000468468 MRPL50Q8N5N7 158 aaKnown RBP19.81■□□□□ 0.76
TSPAN4-211ENST00000468468 COG3Q96JB2 828 aa19.81■□□□□ 0.76
TSPAN4-211ENST00000468468 ZBTB7BO15156 539 aaPredicted RBP19.8■□□□□ 0.76
TSPAN4-211ENST00000468468 MCM4P33991 863 aa19.8■□□□□ 0.76
TSPAN4-211ENST00000468468 MAP2P11137 1827 aaKnown RBP19.8■□□□□ 0.76
TSPAN4-211ENST00000468468 RRS1Q15050 365 aaKnown RBP19.8■□□□□ 0.76
TSPAN4-211ENST00000468468 TSPYL6Q8N831 410 aa19.8■□□□□ 0.76
TSPAN4-211ENST00000468468 MON2Q7Z3U7 1717 aa19.8■□□□□ 0.76
TSPAN4-211ENST00000468468 GNAI1P63096 354 aa19.79■□□□□ 0.76
TSPAN4-211ENST00000468468 ZNF692Q9BU19 519 aaPredicted RBP19.79■□□□□ 0.76
TSPAN4-211ENST00000468468 TBX22Q9Y458 520 aa19.79■□□□□ 0.76
TSPAN4-211ENST00000468468 ACEP12821 1306 aa19.78■□□□□ 0.76
TSPAN4-211ENST00000468468 ELL2O00472 640 aaPredicted RBP19.78■□□□□ 0.76
TSPAN4-211ENST00000468468 ANKRD45Q5TZF3 282 aa19.78■□□□□ 0.76
TSPAN4-211ENST00000468468 ARHGAP45Q92619 1136 aa19.78■□□□□ 0.76
TSPAN4-211ENST00000468468 CHMP4BQ9H444 224 aaKnown RBP19.78■□□□□ 0.76
TSPAN4-211ENST00000468468 L1TD1Q5T7N2 865 aaKnown RBP19.78■□□□□ 0.76
TSPAN4-211ENST00000468468 C1orf115Q9H7X2 142 aa19.78■□□□□ 0.76
TSPAN4-211ENST00000468468 IFT57Q9NWB7 429 aa19.78■□□□□ 0.76
TSPAN4-211ENST00000468468 IL13P35225 146 aa19.78■□□□□ 0.76
TSPAN4-211ENST00000468468 RBM25P49756 843 aaKnown RBP19.78■□□□□ 0.76
TSPAN4-211ENST00000468468 AKAP12Q02952 1782 aa19.77■□□□□ 0.76
TSPAN4-211ENST00000468468 ITSN1Q15811 1721 aa19.77■□□□□ 0.76
TSPAN4-211ENST00000468468 GCC1Q96CN9 775 aa19.77■□□□□ 0.75
TSPAN4-211ENST00000468468 MBIPQ9NS73 344 aa19.77■□□□□ 0.75
TSPAN4-211ENST00000468468 BMP2KLQ5H9B9 411 aa19.76■□□□□ 0.75
TSPAN4-211ENST00000468468 PTCH1Q13635 1447 aa19.75■□□□□ 0.75
TSPAN4-211ENST00000468468 TTC21BQ7Z4L5 1316 aa19.75■□□□□ 0.75
TSPAN4-211ENST00000468468 ZNF853P0CG23 659 aa19.75■□□□□ 0.75
TSPAN4-211ENST00000468468 AATKQ6ZMQ8 1374 aa19.75■□□□□ 0.75
TSPAN4-211ENST00000468468 PIK3R4Q99570 1358 aa19.75■□□□□ 0.75
TSPAN4-211ENST00000468468 PLEKHG3A1L390 1219 aa19.74■□□□□ 0.75
TSPAN4-211ENST00000468468 TWISTNBQ3B726 338 aaPredicted RBP19.74■□□□□ 0.75
TSPAN4-211ENST00000468468 FAM43AQ8N2R8 423 aa19.73■□□□□ 0.75
TSPAN4-211ENST00000468468 CDK12Q9NYV4 1490 aaPredicted RBP19.73■□□□□ 0.75
TSPAN4-211ENST00000468468 SNX21Q969T3 373 aa19.72■□□□□ 0.75
TSPAN4-211ENST00000468468 GZF1Q9H116 711 aaPredicted RBP19.72■□□□□ 0.75
TSPAN4-211ENST00000468468 ABCC4O15439 1325 aa19.72■□□□□ 0.75
TSPAN4-211ENST00000468468 TOPAZ1Q8N9V7 1692 aa19.72■□□□□ 0.75
TSPAN4-211ENST00000468468 LMOD3Q0VAK6 560 aa19.72■□□□□ 0.75
TSPAN4-211ENST00000468468 SIRT2Q8IXJ6 389 aa19.72■□□□□ 0.75
TSPAN4-211ENST00000468468 C8orf58Q8NAV2 365 aa19.72■□□□□ 0.75
TSPAN4-211ENST00000468468 CFAP44Q96MT7 982 aa19.72■□□□□ 0.75
TSPAN4-211ENST00000468468 ARXQ96QS3 562 aa19.72■□□□□ 0.75
TSPAN4-211ENST00000468468 TRAK2O60296 914 aa19.71■□□□□ 0.75
TSPAN4-211ENST00000468468 USP6P35125 1406 aa19.7■□□□□ 0.74
TSPAN4-211ENST00000468468 GOLGA6L3A6NEY3 463 aa19.7■□□□□ 0.74
TSPAN4-211ENST00000468468 KCNA6P17658 529 aa19.7■□□□□ 0.74
TSPAN4-211ENST00000468468 FAM83GA6ND36 823 aa19.7■□□□□ 0.74
TSPAN4-211ENST00000468468 RIMS1Q86UR5 1692 aaKnown RBP19.69■□□□□ 0.74
TSPAN4-211ENST00000468468 SOX12O15370 315 aa19.69■□□□□ 0.74
TSPAN4-211ENST00000468468 NCOA3Q9Y6Q9 1424 aa19.69■□□□□ 0.74
TSPAN4-211ENST00000468468 NRKQ7Z2Y5 1582 aa19.69■□□□□ 0.74
TSPAN4-211ENST00000468468 CEP170BQ9Y4F5 1589 aaPredicted RBP19.69■□□□□ 0.74
TSPAN4-211ENST00000468468 API5Q9BZZ5 524 aaKnown RBP19.69■□□□□ 0.74
TSPAN4-211ENST00000468468 HSP90AB1P08238 724 aaKnown RBP19.68■□□□□ 0.74
TSPAN4-211ENST00000468468 DDIT3P35638 169 aa19.68■□□□□ 0.74
TSPAN4-211ENST00000468468 DCTN1Q14203 1278 aa19.67■□□□□ 0.74
TSPAN4-211ENST00000468468 TBC1D9Q6ZT07 1266 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms