RNA–Protein interactions for RNA: ENST00000468149.5

MSL3-210, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 1,646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-210ENST00000468149 ALS2Q96Q42 1657 aa9.9□□□□□ -0.83
MSL3-210ENST00000468149 FOXO3O43524 673 aa9.89□□□□□ -0.83
MSL3-210ENST00000468149 PDE4DQ08499 809 aa9.89□□□□□ -0.83
MSL3-210ENST00000468149 CLUAP1Q96AJ1 413 aa9.89□□□□□ -0.83
MSL3-210ENST00000468149 CDK19Q9BWU1 502 aa9.89□□□□□ -0.83
MSL3-210ENST00000468149 PHF8Q9UPP1 1060 aa9.89□□□□□ -0.83
MSL3-210ENST00000468149 PRR36Q9H6K5 1346 aa9.89□□□□□ -0.83
MSL3-210ENST00000468149 ZNF316A6NFI3 1004 aaPredicted RBP9.89□□□□□ -0.83
MSL3-210ENST00000468149 ONECUT3O60422 494 aaPredicted RBP9.89□□□□□ -0.83
MSL3-210ENST00000468149 KRI1Q8N9T8 703 aaKnown RBP9.89□□□□□ -0.83
MSL3-210ENST00000468149 DDX17Q92841 729 aaKnown RBP9.89□□□□□ -0.83
MSL3-210ENST00000468149 EVC2Q86UK5 1308 aa9.88□□□□□ -0.83
MSL3-210ENST00000468149 ABCA3Q99758 1704 aa9.88□□□□□ -0.83
MSL3-210ENST00000468149 E2F4Q16254 413 aa9.88□□□□□ -0.83
MSL3-210ENST00000468149 ILDR2Q71H61 639 aa9.88□□□□□ -0.83
MSL3-210ENST00000468149 NUDT16Q96DE0 195 aaKnown RBP9.88□□□□□ -0.83
MSL3-210ENST00000468149 CCDC61Q9Y6R9 512 aa9.88□□□□□ -0.83
MSL3-210ENST00000468149 TRIM66O15016 1216 aa9.87□□□□□ -0.83
MSL3-210ENST00000468149 CRYBG1Q9Y4K1 1723 aa9.87□□□□□ -0.83
MSL3-210ENST00000468149 POLR3AO14802 1390 aaPredicted RBP9.87□□□□□ -0.83
MSL3-210ENST00000468149 PNPLA6Q8IY17 1366 aa9.87□□□□□ -0.83
MSL3-210ENST00000468149 MON2Q7Z3U7 1717 aa9.86□□□□□ -0.83
MSL3-210ENST00000468149 SRPK2P78362 688 aaKnown RBP9.86□□□□□ -0.83
MSL3-210ENST00000468149 PSME1Q06323 249 aa9.86□□□□□ -0.83
MSL3-210ENST00000468149 FAM117AQ9C073 453 aa9.86□□□□□ -0.83
MSL3-210ENST00000468149 SBNO1A3KN83 1393 aa9.86□□□□□ -0.83
MSL3-210ENST00000468149 USP47Q96K76 1375 aa9.86□□□□□ -0.83
MSL3-210ENST00000468149 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.85□□□□□ -0.83
MSL3-210ENST00000468149 SPDYE1Q8NFV5 336 aaPredicted RBP9.85□□□□□ -0.83
MSL3-210ENST00000468149 PMFBP1Q8TBY8 1022 aa9.85□□□□□ -0.83
MSL3-210ENST00000468149 ZFP91Q96JP5 570 aaPredicted RBP9.85□□□□□ -0.83
MSL3-210ENST00000468149 USP35Q9P2H5 1018 aa9.85□□□□□ -0.83
MSL3-210ENST00000468149 LRP6O75581 1613 aa9.85□□□□□ -0.83
MSL3-210ENST00000468149 TNS3Q68CZ2 1445 aa9.85□□□□□ -0.83
MSL3-210ENST00000468149 PPIP5K1Q6PFW1 1433 aa9.85□□□□□ -0.83
MSL3-210ENST00000468149 PLEKHG3A1L390 1219 aa9.85□□□□□ -0.83
MSL3-210ENST00000468149 KRT28Q7Z3Y7 464 aa9.85□□□□□ -0.83
MSL3-210ENST00000468149 SERPINA10Q9UK55 444 aa9.85□□□□□ -0.83
MSL3-210ENST00000468149 SPATA31A3Q5VYP0 1347 aa9.85□□□□□ -0.83
MSL3-210ENST00000468149 ATAD2Q6PL18 1390 aa9.84□□□□□ -0.83
MSL3-210ENST00000468149 ST20-MTHFSA0A0A6YYL1 179 aa9.84□□□□□ -0.83
MSL3-210ENST00000468149 XPCQ01831 940 aaPredicted RBP9.84□□□□□ -0.83
MSL3-210ENST00000468149 NGDNQ8NEJ9 315 aaKnown RBP9.84□□□□□ -0.83
MSL3-210ENST00000468149 TESK2Q96S53 571 aa9.84□□□□□ -0.83
MSL3-210ENST00000468149 CABP2Q9NPB3 220 aa9.84□□□□□ -0.83
MSL3-210ENST00000468149 DISP3Q9P2K9 1392 aa9.84□□□□□ -0.83
MSL3-210ENST00000468149 NRKQ7Z2Y5 1582 aa9.83□□□□□ -0.84
MSL3-210ENST00000468149 RETREG2Q8NC44 543 aa9.83□□□□□ -0.84
MSL3-210ENST00000468149 FBXW7Q969H0 707 aa9.83□□□□□ -0.84
MSL3-210ENST00000468149 ACEP12821 1306 aa9.83□□□□□ -0.84
MSL3-210ENST00000468149 ARHGEF10O15013 1369 aa9.83□□□□□ -0.84
MSL3-210ENST00000468149 BRD4O60885 1362 aaPredicted RBP9.83□□□□□ -0.84
MSL3-210ENST00000468149 PHRF1Q9P1Y6 1649 aaKnown RBP9.83□□□□□ -0.84
MSL3-210ENST00000468149 CCDC97Q96F63 343 aaPredicted RBP9.82□□□□□ -0.84
MSL3-210ENST00000468149 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.82□□□□□ -0.84
MSL3-210ENST00000468149 NWD2Q9ULI1 1742 aa9.82□□□□□ -0.84
MSL3-210ENST00000468149 REM2Q8IYK8 340 aaPredicted RBP9.82□□□□□ -0.84
MSL3-210ENST00000468149 CABP1Q9NZU7 370 aa9.81□□□□□ -0.84
MSL3-210ENST00000468149 NINLQ9Y2I6 1382 aa9.81□□□□□ -0.84
MSL3-210ENST00000468149 MYOM1P52179 1685 aa9.81□□□□□ -0.84
MSL3-210ENST00000468149 USP54Q70EL1 1684 aa9.81□□□□□ -0.84
MSL3-210ENST00000468149 PIK3C2AO00443 1686 aa9.8□□□□□ -0.84
MSL3-210ENST00000468149 PLCH1Q4KWH8 1693 aa9.8□□□□□ -0.84
MSL3-210ENST00000468149 USP6P35125 1406 aa9.8□□□□□ -0.84
MSL3-210ENST00000468149 CPSF1Q10570 1443 aaKnown RBP9.8□□□□□ -0.84
MSL3-210ENST00000468149 IRF5Q13568 498 aa9.8□□□□□ -0.84
MSL3-210ENST00000468149 NUTM2BA6NNL0 878 aaPredicted RBP9.79□□□□□ -0.84
MSL3-210ENST00000468149 NUTM2EB1AL46 878 aaPredicted RBP9.79□□□□□ -0.84
MSL3-210ENST00000468149 TMF1P82094 1093 aa9.79□□□□□ -0.84
MSL3-210ENST00000468149 DCAF8Q5TAQ9 597 aa9.79□□□□□ -0.84
MSL3-210ENST00000468149 NUTM2AQ8IVF1 878 aaPredicted RBP9.79□□□□□ -0.84
MSL3-210ENST00000468149 DDRGK1Q96HY6 314 aa9.79□□□□□ -0.84
MSL3-210ENST00000468149 CD163L1Q9NR16 1453 aa9.79□□□□□ -0.84
MSL3-210ENST00000468149 SSH2Q76I76 1423 aa9.79□□□□□ -0.84
MSL3-210ENST00000468149 EIF4G2P78344 907 aaKnown RBP eCLIP9.78□□□□□ -0.84
MSL3-210ENST00000468149 CDCA8Q53HL2 280 aa9.78□□□□□ -0.84
MSL3-210ENST00000468149 MEX3CQ5U5Q3 659 aaKnown RBP9.78□□□□□ -0.84
MSL3-210ENST00000468149 COL14A1Q05707 1796 aaKnown RBP9.78□□□□□ -0.84
MSL3-210ENST00000468149 PAK3O75914 559 aaPredicted RBP9.78□□□□□ -0.84
MSL3-210ENST00000468149 RGS17Q9UGC6 210 aaPredicted RBP9.78□□□□□ -0.84
MSL3-210ENST00000468149 NUBP1P53384 320 aa9.77□□□□□ -0.85
MSL3-210ENST00000468149 ZNF772Q68DY9 489 aaPredicted RBP9.77□□□□□ -0.85
MSL3-210ENST00000468149 GPIHBP1Q8IV16 184 aa9.77□□□□□ -0.85
MSL3-210ENST00000468149 KIF20BQ96Q89 1820 aa9.76□□□□□ -0.85
MSL3-210ENST00000468149 KTN1Q86UP2 1357 aaKnown RBP9.76□□□□□ -0.85
MSL3-210ENST00000468149 LTN1O94822 1766 aa9.76□□□□□ -0.85
MSL3-210ENST00000468149 TTC21AQ8NDW8 1320 aa9.75□□□□□ -0.85
MSL3-210ENST00000468149 NRAPQ86VF7 1730 aa9.75□□□□□ -0.85
MSL3-210ENST00000468149 ADAMTS2O95450 1211 aa9.75□□□□□ -0.85
MSL3-210ENST00000468149 ABTB2Q8N961 1025 aa9.75□□□□□ -0.85
MSL3-210ENST00000468149 C8orf37Q96NL8 207 aa9.75□□□□□ -0.85
MSL3-210ENST00000468149 TERF2IPQ9NYB0 399 aa9.75□□□□□ -0.85
MSL3-210ENST00000468149 SLIT2O94813 1529 aa9.75□□□□□ -0.85
MSL3-210ENST00000468149 FAM177A1Q8N128 213 aaPredicted RBP9.74□□□□□ -0.85
MSL3-210ENST00000468149 FNBP4Q8N3X1 1017 aaPredicted RBP9.74□□□□□ -0.85
MSL3-210ENST00000468149 TMC1Q8TDI8 760 aa9.74□□□□□ -0.85
MSL3-210ENST00000468149 NGLY1Q96IV0 654 aa9.74□□□□□ -0.85
MSL3-210ENST00000468149 SLC12A5Q9H2X9 1139 aa9.74□□□□□ -0.85
MSL3-210ENST00000468149 CLEC11AQ9Y240 323 aa9.74□□□□□ -0.85
MSL3-210ENST00000468149 RGPD5Q99666 1765 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms