RNA–Protein interactions for RNA: ENST00000467529.5

TMEM254-209, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 1,963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-209ENST00000467529 KDM4FA0A1W2PPD8 638 aa11.68□□□□□ -0.54
TMEM254-209ENST00000467529 PAK3O75914 559 aaPredicted RBP11.68□□□□□ -0.54
TMEM254-209ENST00000467529 NFE2L2Q16236 605 aa11.68□□□□□ -0.54
TMEM254-209ENST00000467529 NUTM2GQ5VZR2 741 aa11.68□□□□□ -0.54
TMEM254-209ENST00000467529 ABTB2Q8N961 1025 aa11.68□□□□□ -0.54
TMEM254-209ENST00000467529 STRCP1A6NGW2 1772 aa11.68□□□□□ -0.54
TMEM254-209ENST00000467529 SBNO1A3KN83 1393 aa11.68□□□□□ -0.54
TMEM254-209ENST00000467529 TSR2Q969E8 191 aaKnown RBP11.67□□□□□ -0.54
TMEM254-209ENST00000467529 RGPD1P0DJD0 1748 aa11.67□□□□□ -0.54
TMEM254-209ENST00000467529 FLT4P35916 1363 aa11.67□□□□□ -0.54
TMEM254-209ENST00000467529 FANCIQ9NVI1 1328 aa11.67□□□□□ -0.54
TMEM254-209ENST00000467529 PSME1Q06323 249 aa11.67□□□□□ -0.54
TMEM254-209ENST00000467529 ORAI2Q96SN7 254 aa11.67□□□□□ -0.54
TMEM254-209ENST00000467529 RARSP54136 660 aaKnown RBP11.66□□□□□ -0.54
TMEM254-209ENST00000467529 SULT6B1Q6IMI4 303 aa11.66□□□□□ -0.54
TMEM254-209ENST00000467529 AEBP1Q8IUX7 1158 aa11.66□□□□□ -0.54
TMEM254-209ENST00000467529 C19orf44Q9H6X5 657 aa11.66□□□□□ -0.54
TMEM254-209ENST00000467529 DLG5Q8TDM6 1919 aa11.66□□□□□ -0.54
TMEM254-209ENST00000467529 AMPHP49418 695 aa11.65□□□□□ -0.54
TMEM254-209ENST00000467529 RTN4Q9NQC3 1192 aaKnown RBP11.65□□□□□ -0.54
TMEM254-209ENST00000467529 TMEM94Q12767 1356 aa11.64□□□□□ -0.55
TMEM254-209ENST00000467529 C1orf167Q5SNV9 1468 aa11.64□□□□□ -0.55
TMEM254-209ENST00000467529 EXOSC9Q06265 439 aaKnown RBP11.64□□□□□ -0.55
TMEM254-209ENST00000467529 ARHGEF10O15013 1369 aa11.64□□□□□ -0.55
TMEM254-209ENST00000467529 KIF24Q5T7B8 1368 aa11.64□□□□□ -0.55
TMEM254-209ENST00000467529 LMTK3Q96Q04 1460 aa11.64□□□□□ -0.55
TMEM254-209ENST00000467529 FOXO3O43524 673 aa11.63□□□□□ -0.55
TMEM254-209ENST00000467529 CT47B1P0C2W7 299 aaPredicted RBP11.63□□□□□ -0.55
TMEM254-209ENST00000467529 HOXC9P31274 260 aa11.63□□□□□ -0.55
TMEM254-209ENST00000467529 THUMPD2Q9BTF0 503 aaKnown RBP11.63□□□□□ -0.55
TMEM254-209ENST00000467529 KIF1AQ12756 1690 aa11.63□□□□□ -0.55
TMEM254-209ENST00000467529 NCOA3Q9Y6Q9 1424 aa11.62□□□□□ -0.55
TMEM254-209ENST00000467529 STRCQ7RTU9 1775 aa11.62□□□□□ -0.55
TMEM254-209ENST00000467529 XPCQ01831 940 aaPredicted RBP11.62□□□□□ -0.55
TMEM254-209ENST00000467529 LMOD3Q0VAK6 560 aa11.62□□□□□ -0.55
TMEM254-209ENST00000467529 LTN1O94822 1766 aa11.62□□□□□ -0.55
TMEM254-209ENST00000467529 NFAT5O94916 1531 aa11.62□□□□□ -0.55
TMEM254-209ENST00000467529 TRPM3Q9HCF6 1732 aaPredicted RBP11.61□□□□□ -0.55
TMEM254-209ENST00000467529 CANXP27824 592 aaKnown RBP11.61□□□□□ -0.55
TMEM254-209ENST00000467529 CALD1Q05682 793 aaKnown RBP11.61□□□□□ -0.55
TMEM254-209ENST00000467529 PDE3AQ14432 1141 aa11.61□□□□□ -0.55
TMEM254-209ENST00000467529 FRAT1Q92837 279 aaPredicted RBP11.61□□□□□ -0.55
TMEM254-209ENST00000467529 EYA1Q99502 592 aa11.61□□□□□ -0.55
TMEM254-209ENST00000467529 BCL2L13Q9BXK5 485 aa11.61□□□□□ -0.55
TMEM254-209ENST00000467529 MST1RQ04912 1400 aa11.61□□□□□ -0.55
TMEM254-209ENST00000467529 ATF3P18847 181 aa11.61□□□□□ -0.55
TMEM254-209ENST00000467529 LAS1LQ9Y4W2 734 aaKnown RBP11.61□□□□□ -0.55
TMEM254-209ENST00000467529 IGSF1Q8N6C5 1336 aa11.6□□□□□ -0.55
TMEM254-209ENST00000467529 RTL1A6NKG5 1358 aa11.6□□□□□ -0.55
TMEM254-209ENST00000467529 KDRP35968 1356 aa11.6□□□□□ -0.55
TMEM254-209ENST00000467529 FAM83GA6ND36 823 aa11.6□□□□□ -0.55
TMEM254-209ENST00000467529 KRT28Q7Z3Y7 464 aa11.6□□□□□ -0.55
TMEM254-209ENST00000467529 IFT57Q9NWB7 429 aa11.6□□□□□ -0.55
TMEM254-209ENST00000467529 DCCP43146 1447 aa11.6□□□□□ -0.55
TMEM254-209ENST00000467529 ZNF853P0CG23 659 aa11.59□□□□□ -0.55
TMEM254-209ENST00000467529 GNAI1P63096 354 aa11.59□□□□□ -0.55
TMEM254-209ENST00000467529 KCNH5Q8NCM2 988 aa11.59□□□□□ -0.55
TMEM254-209ENST00000467529 DCTN1Q14203 1278 aa11.59□□□□□ -0.55
TMEM254-209ENST00000467529 PANK1Q8TE04 598 aa11.59□□□□□ -0.55
TMEM254-209ENST00000467529 XIRP1Q702N8 1843 aaKnown RBP11.58□□□□□ -0.56
TMEM254-209ENST00000467529 IP6K1Q92551 441 aa11.58□□□□□ -0.56
TMEM254-209ENST00000467529 SLIT3O75094 1523 aa11.58□□□□□ -0.56
TMEM254-209ENST00000467529 LMOD2Q6P5Q4 547 aa11.58□□□□□ -0.56
TMEM254-209ENST00000467529 SSH1Q8WYL5 1049 aa11.58□□□□□ -0.56
TMEM254-209ENST00000467529 LTV1Q96GA3 475 aaPredicted RBP11.58□□□□□ -0.56
TMEM254-209ENST00000467529 CFAP44Q96MT7 982 aa11.58□□□□□ -0.56
TMEM254-209ENST00000467529 MBIPQ9NS73 344 aa11.58□□□□□ -0.56
TMEM254-209ENST00000467529 TNNQ9UQP3 1299 aa11.58□□□□□ -0.56
TMEM254-209ENST00000467529 PHRF1Q9P1Y6 1649 aaKnown RBP11.57□□□□□ -0.56
TMEM254-209ENST00000467529 MTHFSDQ2M296 383 aaKnown RBP11.57□□□□□ -0.56
TMEM254-209ENST00000467529 CADPS2Q86UW7 1296 aa11.57□□□□□ -0.56
TMEM254-209ENST00000467529 SMC4Q9NTJ3 1288 aa11.57□□□□□ -0.56
TMEM254-209ENST00000467529 COG6Q9Y2V7 657 aa11.57□□□□□ -0.56
TMEM254-209ENST00000467529 GCP02774 474 aa11.56□□□□□ -0.56
TMEM254-209ENST00000467529 RLBP1P12271 317 aa11.56□□□□□ -0.56
TMEM254-209ENST00000467529 USP19O94966 1318 aa11.56□□□□□ -0.56
TMEM254-209ENST00000467529 MSH6P52701 1360 aa11.56□□□□□ -0.56
TMEM254-209ENST00000467529 ALS2Q96Q42 1657 aa11.56□□□□□ -0.56
TMEM254-209ENST00000467529 ZBTB7CA1YPR0 619 aa11.56□□□□□ -0.56
TMEM254-209ENST00000467529 ZKSCAN2Q63HK3 967 aa11.56□□□□□ -0.56
TMEM254-209ENST00000467529 MCM10Q7L590 875 aa11.56□□□□□ -0.56
TMEM254-209ENST00000467529 PLEKHG5O94827 1062 aa11.55□□□□□ -0.56
TMEM254-209ENST00000467529 ALDH1L2Q3SY69 923 aa11.55□□□□□ -0.56
TMEM254-209ENST00000467529 ARHGEF25Q86VW2 580 aa11.55□□□□□ -0.56
TMEM254-209ENST00000467529 TSPYL6Q8N831 410 aa11.55□□□□□ -0.56
TMEM254-209ENST00000467529 DDX17Q92841 729 aaKnown RBP11.55□□□□□ -0.56
TMEM254-209ENST00000467529 KDM2BQ8NHM5 1336 aa11.55□□□□□ -0.56
TMEM254-209ENST00000467529 VAMP4O75379 141 aa11.54□□□□□ -0.56
TMEM254-209ENST00000467529 ZNF428Q96B54 188 aa11.54□□□□□ -0.56
TMEM254-209ENST00000467529 RBM19Q9Y4C8 960 aaKnown RBP11.54□□□□□ -0.56
TMEM254-209ENST00000467529 USHBP1Q8N6Y0 703 aa11.54□□□□□ -0.56
TMEM254-209ENST00000467529 GAS2L2Q8NHY3 880 aa11.54□□□□□ -0.56
TMEM254-209ENST00000467529 CLUAP1Q96AJ1 413 aa11.54□□□□□ -0.56
TMEM254-209ENST00000467529 NOB1Q9ULX3 412 aaKnown RBP11.54□□□□□ -0.56
TMEM254-209ENST00000467529 CENPQQ7L2Z9 268 aaPredicted RBP11.53□□□□□ -0.56
TMEM254-209ENST00000467529 C8orf58Q8NAV2 365 aa11.53□□□□□ -0.56
TMEM254-209ENST00000467529 ZNF335Q9H4Z2 1342 aaPredicted RBP11.53□□□□□ -0.56
TMEM254-209ENST00000467529 CRB1P82279 1406 aa11.53□□□□□ -0.56
TMEM254-209ENST00000467529 RGPD2P0DJD1 1756 aa11.53□□□□□ -0.56
TMEM254-209ENST00000467529 ELL2O00472 640 aaPredicted RBP11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms