RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 RIPK4P57078 832 aa19.31■□□□□ 0.68
CHD1L-205ENST00000467213 ARXQ96QS3 562 aa19.31■□□□□ 0.68
CHD1L-205ENST00000467213 BAG4O95429 457 aaKnown RBP19.3■□□□□ 0.68
CHD1L-205ENST00000467213 CWC22Q9HCG8 908 aaKnown RBP19.3■□□□□ 0.68
CHD1L-205ENST00000467213 MAP7D2Q96T17 732 aa19.3■□□□□ 0.68
CHD1L-205ENST00000467213 SIGLEC1Q9BZZ2 1709 aa19.29■□□□□ 0.68
CHD1L-205ENST00000467213 PDLIM2Q96JY6 352 aa19.29■□□□□ 0.68
CHD1L-205ENST00000467213 MCM5P33992 734 aa19.28■□□□□ 0.68
CHD1L-205ENST00000467213 TERF2IPQ9NYB0 399 aa19.28■□□□□ 0.68
CHD1L-205ENST00000467213 DIAPH1O60610 1272 aaKnown RBP19.28■□□□□ 0.68
CHD1L-205ENST00000467213 ZNF500O60304 480 aaPredicted RBP19.27■□□□□ 0.68
CHD1L-205ENST00000467213 MRPL50Q8N5N7 158 aaKnown RBP19.27■□□□□ 0.68
CHD1L-205ENST00000467213 PTPRMP28827 1452 aa19.27■□□□□ 0.68
CHD1L-205ENST00000467213 CD2BP2O95400 341 aaKnown RBP19.26■□□□□ 0.67
CHD1L-205ENST00000467213 GAS2L2Q8NHY3 880 aa19.26■□□□□ 0.67
CHD1L-205ENST00000467213 ANKRD45Q5TZF3 282 aa19.26■□□□□ 0.67
CHD1L-205ENST00000467213 U2SURPO15042 1029 aaKnown RBP19.25■□□□□ 0.67
CHD1L-205ENST00000467213 FYB1O15117 783 aa19.25■□□□□ 0.67
CHD1L-205ENST00000467213 SSFA2P28290 1259 aa19.25■□□□□ 0.67
CHD1L-205ENST00000467213 POGZQ7Z3K3 1410 aa19.25■□□□□ 0.67
CHD1L-205ENST00000467213 VAMP4O75379 141 aa19.25■□□□□ 0.67
CHD1L-205ENST00000467213 TMEM132EQ6IEE7 984 aa19.25■□□□□ 0.67
CHD1L-205ENST00000467213 ZMYND15Q9H091 742 aa19.25■□□□□ 0.67
CHD1L-205ENST00000467213 NOL7Q9UMY1 257 aaKnown RBP19.25■□□□□ 0.67
CHD1L-205ENST00000467213 DDX49Q9Y6V7 483 aaKnown RBP19.25■□□□□ 0.67
CHD1L-205ENST00000467213 IFT57Q9NWB7 429 aa19.24■□□□□ 0.67
CHD1L-205ENST00000467213 MSNP26038 577 aaKnown RBP19.24■□□□□ 0.67
CHD1L-205ENST00000467213 KIAA1211Q6ZU35 1233 aa19.24■□□□□ 0.67
CHD1L-205ENST00000467213 ZNF853P0CG23 659 aa19.23■□□□□ 0.67
CHD1L-205ENST00000467213 VSIG10Q8N0Z9 540 aa19.23■□□□□ 0.67
CHD1L-205ENST00000467213 GNAI1P63096 354 aa19.22■□□□□ 0.67
CHD1L-205ENST00000467213 API5Q9BZZ5 524 aaKnown RBP19.22■□□□□ 0.67
CHD1L-205ENST00000467213 KNDC1Q76NI1 1749 aa19.21■□□□□ 0.67
CHD1L-205ENST00000467213 MTERF4Q7Z6M4 381 aaKnown RBP19.21■□□□□ 0.67
CHD1L-205ENST00000467213 SIRT2Q8IXJ6 389 aa19.21■□□□□ 0.67
CHD1L-205ENST00000467213 LMBRD1Q9NUN5 540 aa19.21■□□□□ 0.67
CHD1L-205ENST00000467213 ATP7BP35670 1465 aa19.21■□□□□ 0.67
CHD1L-205ENST00000467213 NFE2L2Q16236 605 aa19.21■□□□□ 0.67
CHD1L-205ENST00000467213 DCTPP1Q9H773 170 aa19.21■□□□□ 0.67
CHD1L-205ENST00000467213 CABP2Q9NPB3 220 aa19.21■□□□□ 0.67
CHD1L-205ENST00000467213 CPSF1Q10570 1443 aaKnown RBP19.2■□□□□ 0.66
CHD1L-205ENST00000467213 CSPP1Q1MSJ5 1256 aa19.2■□□□□ 0.66
CHD1L-205ENST00000467213 USP26Q9BXU7 913 aa19.19■□□□□ 0.66
CHD1L-205ENST00000467213 CFAP65Q6ZU64 1925 aaKnown RBP19.19■□□□□ 0.66
CHD1L-205ENST00000467213 ARHGEF40Q8TER5 1519 aa19.19■□□□□ 0.66
CHD1L-205ENST00000467213 CHGAP10645 457 aaKnown RBP19.19■□□□□ 0.66
CHD1L-205ENST00000467213 ZSCAN23Q3MJ62 389 aa19.19■□□□□ 0.66
CHD1L-205ENST00000467213 PLEKHM2Q8IWE5 1019 aa19.19■□□□□ 0.66
CHD1L-205ENST00000467213 TTC22Q5TAA0 569 aa19.18■□□□□ 0.66
CHD1L-205ENST00000467213 INTS3Q68E01 1043 aaKnown RBP19.18■□□□□ 0.66
CHD1L-205ENST00000467213 DLC1Q96QB1 1528 aa19.18■□□□□ 0.66
CHD1L-205ENST00000467213 KLHL34Q8N239 644 aa19.18■□□□□ 0.66
CHD1L-205ENST00000467213 GGNBP2Q9H3C7 697 aa19.18■□□□□ 0.66
CHD1L-205ENST00000467213 TMEM131LA2VDJ0 1609 aa19.17■□□□□ 0.66
CHD1L-205ENST00000467213 CDK12Q9NYV4 1490 aaPredicted RBP19.17■□□□□ 0.66
CHD1L-205ENST00000467213 GSPT1P15170 499 aaKnown RBP19.17■□□□□ 0.66
CHD1L-205ENST00000467213 LMOD3Q0VAK6 560 aa19.17■□□□□ 0.66
CHD1L-205ENST00000467213 HDGFL2Q7Z4V5 671 aaPredicted RBP19.17■□□□□ 0.66
CHD1L-205ENST00000467213 DLG5Q8TDM6 1919 aa19.17■□□□□ 0.66
CHD1L-205ENST00000467213 YTHDC2Q9H6S0 1430 aaKnown RBP19.16■□□□□ 0.66
CHD1L-205ENST00000467213 MAP2P11137 1827 aaKnown RBP19.16■□□□□ 0.66
CHD1L-205ENST00000467213 RBM42Q9BTD8 480 aaKnown RBP19.15■□□□□ 0.66
CHD1L-205ENST00000467213 ST18O60284 1047 aa19.15■□□□□ 0.66
CHD1L-205ENST00000467213 HAP1P54257 671 aaPredicted RBP19.15■□□□□ 0.66
CHD1L-205ENST00000467213 SLC52A1Q9NWF4 448 aa19.15■□□□□ 0.66
CHD1L-205ENST00000467213 AK9Q5TCS8 1911 aa19.14■□□□□ 0.66
CHD1L-205ENST00000467213 ZKSCAN5Q9Y2L8 839 aa19.14■□□□□ 0.65
CHD1L-205ENST00000467213 RPAP2Q8IXW5 612 aaPredicted RBP19.14■□□□□ 0.65
CHD1L-205ENST00000467213 AATKQ6ZMQ8 1374 aa19.13■□□□□ 0.65
CHD1L-205ENST00000467213 CASC1Q6TDU7 716 aa19.13■□□□□ 0.65
CHD1L-205ENST00000467213 ATP10DQ9P241 1426 aa19.13■□□□□ 0.65
CHD1L-205ENST00000467213 MBD3O95983 291 aa19.13■□□□□ 0.65
CHD1L-205ENST00000467213 LRSAM1Q6UWE0 723 aa19.13■□□□□ 0.65
CHD1L-205ENST00000467213 PRKAR2BP31323 418 aa19.12■□□□□ 0.65
CHD1L-205ENST00000467213 SRPK2P78362 688 aaKnown RBP19.12■□□□□ 0.65
CHD1L-205ENST00000467213 MCTP1Q6DN14 999 aa19.12■□□□□ 0.65
CHD1L-205ENST00000467213 DYNC1I1O14576 645 aa19.12■□□□□ 0.65
CHD1L-205ENST00000467213 MCM2P49736 904 aa19.12■□□□□ 0.65
CHD1L-205ENST00000467213 ANKRD44Q8N8A2 993 aa19.12■□□□□ 0.65
CHD1L-205ENST00000467213 IL17RAQ96F46 866 aa19.12■□□□□ 0.65
CHD1L-205ENST00000467213 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.12■□□□□ 0.65
CHD1L-205ENST00000467213 CCDC39Q9UFE4 941 aa19.12■□□□□ 0.65
CHD1L-205ENST00000467213 RBSNQ9H1K0 784 aa19.11■□□□□ 0.65
CHD1L-205ENST00000467213 MYO5BQ9ULV0 1848 aa19.11■□□□□ 0.65
CHD1L-205ENST00000467213 REC8O95072 547 aa19.11■□□□□ 0.65
CHD1L-205ENST00000467213 TUBGCP6Q96RT7 1819 aa19.11■□□□□ 0.65
CHD1L-205ENST00000467213 CAVIN1Q6NZI2 390 aaKnown RBP19.1■□□□□ 0.65
CHD1L-205ENST00000467213 PREX1Q8TCU6 1659 aa19.1■□□□□ 0.65
CHD1L-205ENST00000467213 OSBPL3Q9H4L5 887 aa19.1■□□□□ 0.65
CHD1L-205ENST00000467213 POLKQ9UBT6 870 aa19.1■□□□□ 0.65
CHD1L-205ENST00000467213 TWISTNBQ3B726 338 aaPredicted RBP19.09■□□□□ 0.65
CHD1L-205ENST00000467213 MBIPQ9NS73 344 aa19.09■□□□□ 0.65
CHD1L-205ENST00000467213 FOXD4L1Q9NU39 408 aa19.09■□□□□ 0.65
CHD1L-205ENST00000467213 ALKQ9UM73 1620 aa19.08■□□□□ 0.65
CHD1L-205ENST00000467213 NRKQ7Z2Y5 1582 aa19.08■□□□□ 0.65
CHD1L-205ENST00000467213 DIP2CQ9Y2E4 1556 aa19.08■□□□□ 0.64
CHD1L-205ENST00000467213 RIMS2Q9UQ26 1411 aa19.07■□□□□ 0.64
CHD1L-205ENST00000467213 PRIM1P49642 420 aaKnown RBP19.07■□□□□ 0.64
CHD1L-205ENST00000467213 GPT2Q8TD30 523 aa19.07■□□□□ 0.64
CHD1L-205ENST00000467213 NEO1Q92859 1461 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms