RNA–Protein interactions for RNA: ENST00000466742.5

ABCF3-206, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 2,331 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-206ENST00000466742 KCNA6P17658 529 aa19.45■□□□□ 0.7
ABCF3-206ENST00000466742 CHMP5Q9NZZ3 219 aa19.45■□□□□ 0.7
ABCF3-206ENST00000466742 CCDC173Q0VFZ6 552 aa19.45■□□□□ 0.7
ABCF3-206ENST00000466742 NPHP4O75161 1426 aaPredicted RBP19.44■□□□□ 0.7
ABCF3-206ENST00000466742 EDC4Q6P2E9 1401 aaKnown RBP19.44■□□□□ 0.7
ABCF3-206ENST00000466742 CDC42BPGQ6DT37 1551 aa19.44■□□□□ 0.7
ABCF3-206ENST00000466742 GGNBP2Q9H3C7 697 aa19.43■□□□□ 0.7
ABCF3-206ENST00000466742 TNNT2P45379 298 aaPredicted RBP19.43■□□□□ 0.7
ABCF3-206ENST00000466742 ZNF692Q9BU19 519 aaPredicted RBP19.43■□□□□ 0.7
ABCF3-206ENST00000466742 PLEKHG3A1L390 1219 aa19.42■□□□□ 0.7
ABCF3-206ENST00000466742 TBC1D32Q96NH3 1257 aa19.42■□□□□ 0.7
ABCF3-206ENST00000466742 NCKAP5LQ9HCH0 1330 aa19.41■□□□□ 0.7
ABCF3-206ENST00000466742 DYNC1I1O14576 645 aa19.41■□□□□ 0.7
ABCF3-206ENST00000466742 ZSCAN20P17040 1043 aaPredicted RBP19.41■□□□□ 0.7
ABCF3-206ENST00000466742 MTHFSP49914 203 aa19.41■□□□□ 0.7
ABCF3-206ENST00000466742 IPO4Q8TEX9 1081 aaKnown RBP19.41■□□□□ 0.7
ABCF3-206ENST00000466742 MAPK8IP3Q9UPT6 1336 aa19.41■□□□□ 0.7
ABCF3-206ENST00000466742 GAS2L3Q86XJ1 694 aa19.41■□□□□ 0.7
ABCF3-206ENST00000466742 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.4■□□□□ 0.7
ABCF3-206ENST00000466742 MSNP26038 577 aaKnown RBP19.39■□□□□ 0.69
ABCF3-206ENST00000466742 CFAP53Q96M91 514 aa19.39■□□□□ 0.69
ABCF3-206ENST00000466742 KIF20AO95235 890 aa19.39■□□□□ 0.69
ABCF3-206ENST00000466742 R3HCC1Q9Y3T6 440 aaKnown RBP19.39■□□□□ 0.69
ABCF3-206ENST00000466742 ANKRD26Q9UPS8 1709 aa19.38■□□□□ 0.69
ABCF3-206ENST00000466742 TOPAZ1Q8N9V7 1692 aa19.38■□□□□ 0.69
ABCF3-206ENST00000466742 PPP4R3BQ5MIZ7 849 aa19.37■□□□□ 0.69
ABCF3-206ENST00000466742 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.37■□□□□ 0.69
ABCF3-206ENST00000466742 CCDC94Q9BW85 323 aaPredicted RBP19.37■□□□□ 0.69
ABCF3-206ENST00000466742 PRDM10Q9NQV6 1147 aa19.37■□□□□ 0.69
ABCF3-206ENST00000466742 UQCRHLA0A096LP55 91 aa19.37■□□□□ 0.69
ABCF3-206ENST00000466742 UQCRHP07919 91 aa19.37■□□□□ 0.69
ABCF3-206ENST00000466742 UPF2Q9HAU5 1272 aaKnown RBP19.37■□□□□ 0.69
ABCF3-206ENST00000466742 CHD2O14647 1828 aaKnown RBP19.37■□□□□ 0.69
ABCF3-206ENST00000466742 GTPBP4Q9BZE4 634 aaKnown RBP19.36■□□□□ 0.69
ABCF3-206ENST00000466742 HS1BP3Q53T59 392 aa19.36■□□□□ 0.69
ABCF3-206ENST00000466742 ANKARQ7Z5J8 1434 aa19.36■□□□□ 0.69
ABCF3-206ENST00000466742 ZNF500O60304 480 aaPredicted RBP19.35■□□□□ 0.69
ABCF3-206ENST00000466742 ACEP12821 1306 aa19.35■□□□□ 0.69
ABCF3-206ENST00000466742 MON2Q7Z3U7 1717 aa19.35■□□□□ 0.69
ABCF3-206ENST00000466742 CHMP4BQ9H444 224 aaKnown RBP19.35■□□□□ 0.69
ABCF3-206ENST00000466742 KIF20BQ96Q89 1820 aa19.34■□□□□ 0.69
ABCF3-206ENST00000466742 TMEM51Q9NW97 253 aa19.34■□□□□ 0.69
ABCF3-206ENST00000466742 NKTRP30414 1462 aaKnown RBP19.34■□□□□ 0.69
ABCF3-206ENST00000466742 AKAP12Q02952 1782 aa19.33■□□□□ 0.69
ABCF3-206ENST00000466742 NUTM2FA1L443 756 aa19.33■□□□□ 0.69
ABCF3-206ENST00000466742 SKOR2Q2VWA4 1001 aaPredicted RBP19.33■□□□□ 0.68
ABCF3-206ENST00000466742 NME9Q86XW9 330 aa19.32■□□□□ 0.68
ABCF3-206ENST00000466742 USP6P35125 1406 aa19.32■□□□□ 0.68
ABCF3-206ENST00000466742 SHPRHQ149N8 1683 aa19.31■□□□□ 0.68
ABCF3-206ENST00000466742 PNPLA6Q8IY17 1366 aa19.31■□□□□ 0.68
ABCF3-206ENST00000466742 ITSN1Q15811 1721 aa19.31■□□□□ 0.68
ABCF3-206ENST00000466742 IGHDP01880 384 aa19.31■□□□□ 0.68
ABCF3-206ENST00000466742 DUSP27Q5VZP5 1158 aa19.31■□□□□ 0.68
ABCF3-206ENST00000466742 NGEFQ8N5V2 710 aa19.31■□□□□ 0.68
ABCF3-206ENST00000466742 TTC21BQ7Z4L5 1316 aa19.31■□□□□ 0.68
ABCF3-206ENST00000466742 LETM1O95202 739 aaPredicted RBP19.3■□□□□ 0.68
ABCF3-206ENST00000466742 KDM4FA0A1W2PPD8 638 aa19.3■□□□□ 0.68
ABCF3-206ENST00000466742 NWD1Q149M9 1564 aa19.3■□□□□ 0.68
ABCF3-206ENST00000466742 AATKQ6ZMQ8 1374 aa19.3■□□□□ 0.68
ABCF3-206ENST00000466742 SSH2Q76I76 1423 aa19.3■□□□□ 0.68
ABCF3-206ENST00000466742 COL3A1P02461 1466 aaPredicted RBP19.29■□□□□ 0.68
ABCF3-206ENST00000466742 ADGRL3Q9HAR2 1447 aa19.29■□□□□ 0.68
ABCF3-206ENST00000466742 PTMSP20962 102 aa19.29■□□□□ 0.68
ABCF3-206ENST00000466742 COG3Q96JB2 828 aa19.29■□□□□ 0.68
ABCF3-206ENST00000466742 CCDC146Q8IYE0 955 aa19.29■□□□□ 0.68
ABCF3-206ENST00000466742 SPRYD3Q8NCJ5 442 aa19.29■□□□□ 0.68
ABCF3-206ENST00000466742 ANP32BQ92688 251 aaKnown RBP19.29■□□□□ 0.68
ABCF3-206ENST00000466742 NOL7Q9UMY1 257 aaKnown RBP19.29■□□□□ 0.68
ABCF3-206ENST00000466742 ZNF521Q96K83 1311 aa19.28■□□□□ 0.68
ABCF3-206ENST00000466742 NASPP49321 788 aaPredicted RBP19.28■□□□□ 0.68
ABCF3-206ENST00000466742 CSPP1Q1MSJ5 1256 aa19.28■□□□□ 0.68
ABCF3-206ENST00000466742 NRKQ7Z2Y5 1582 aa19.28■□□□□ 0.68
ABCF3-206ENST00000466742 POLKQ9UBT6 870 aa19.28■□□□□ 0.68
ABCF3-206ENST00000466742 FMN2Q9NZ56 1722 aa19.27■□□□□ 0.68
ABCF3-206ENST00000466742 APAF1O14727 1248 aa19.26■□□□□ 0.67
ABCF3-206ENST00000466742 DDIT3P35638 169 aa19.26■□□□□ 0.67
ABCF3-206ENST00000466742 TTC21AQ8NDW8 1320 aa19.26■□□□□ 0.67
ABCF3-206ENST00000466742 NGDNQ8NEJ9 315 aaKnown RBP19.26■□□□□ 0.67
ABCF3-206ENST00000466742 PMFBP1Q8TBY8 1022 aa19.26■□□□□ 0.67
ABCF3-206ENST00000466742 ZRANB1Q9UGI0 708 aa19.26■□□□□ 0.67
ABCF3-206ENST00000466742 SASS6Q6UVJ0 657 aa19.25■□□□□ 0.67
ABCF3-206ENST00000466742 AEBP2Q6ZN18 517 aaPredicted RBP19.25■□□□□ 0.67
ABCF3-206ENST00000466742 RUNDC1Q96C34 613 aa19.25■□□□□ 0.67
ABCF3-206ENST00000466742 NALCNQ8IZF0 1738 aa19.25■□□□□ 0.67
ABCF3-206ENST00000466742 NCOA3Q9Y6Q9 1424 aa19.25■□□□□ 0.67
ABCF3-206ENST00000466742 IBTKQ9P2D0 1353 aaPredicted RBP19.25■□□□□ 0.67
ABCF3-206ENST00000466742 TAF3Q5VWG9 929 aa19.24■□□□□ 0.67
ABCF3-206ENST00000466742 OVOS2A0A0J9YW53 1432 aa19.24■□□□□ 0.67
ABCF3-206ENST00000466742 OVOS2Q6IE36 1432 aa19.24■□□□□ 0.67
ABCF3-206ENST00000466742 U2AF1L5P0DN76 240 aaPredicted RBP19.23■□□□□ 0.67
ABCF3-206ENST00000466742 U2AF1Q01081 240 aaKnown RBP eCLIP19.23■□□□□ 0.67
ABCF3-206ENST00000466742 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.23■□□□□ 0.67
ABCF3-206ENST00000466742 DIAPH1O60610 1272 aaKnown RBP19.23■□□□□ 0.67
ABCF3-206ENST00000466742 ARID3AQ99856 593 aa19.23■□□□□ 0.67
ABCF3-206ENST00000466742 NCBP3Q53F19 620 aaKnown RBP19.22■□□□□ 0.67
ABCF3-206ENST00000466742 RBM33Q96EV2 1170 aaKnown RBP19.22■□□□□ 0.67
ABCF3-206ENST00000466742 MCM5P33992 734 aa19.22■□□□□ 0.67
ABCF3-206ENST00000466742 FBLN1P23142 703 aa19.21■□□□□ 0.67
ABCF3-206ENST00000466742 GBP4Q96PP9 640 aa19.21■□□□□ 0.67
ABCF3-206ENST00000466742 CDK12Q9NYV4 1490 aaPredicted RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms