RNA–Protein interactions for RNA: ENST00000466373.1

UFD1-206, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 3,059 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-206ENST00000466373 CPS1P31327 1500 aa13.18□□□□□ -0.3
UFD1-206ENST00000466373 BECN1Q14457 450 aa13.18□□□□□ -0.3
UFD1-206ENST00000466373 TBC1D32Q96NH3 1257 aa13.18□□□□□ -0.3
UFD1-206ENST00000466373 ALDH1L2Q3SY69 923 aa13.17□□□□□ -0.3
UFD1-206ENST00000466373 AEBP1Q8IUX7 1158 aa13.17□□□□□ -0.3
UFD1-206ENST00000466373 CEBPAP49715 358 aaPredicted RBP13.16□□□□□ -0.3
UFD1-206ENST00000466373 GNAI1P63096 354 aa13.16□□□□□ -0.3
UFD1-206ENST00000466373 GSE1Q14687 1217 aa13.16□□□□□ -0.3
UFD1-206ENST00000466373 SMC5Q8IY18 1101 aa13.16□□□□□ -0.3
UFD1-206ENST00000466373 C8orf58Q8NAV2 365 aa13.16□□□□□ -0.3
UFD1-206ENST00000466373 SLC26A8Q96RN1 970 aa13.16□□□□□ -0.3
UFD1-206ENST00000466373 ROBO2Q9HCK4 1378 aa13.16□□□□□ -0.3
UFD1-206ENST00000466373 HDGFP51858 240 aaKnown RBP13.16□□□□□ -0.3
UFD1-206ENST00000466373 CDC42BPGQ6DT37 1551 aa13.15□□□□□ -0.3
UFD1-206ENST00000466373 TNRQ92752 1358 aa13.15□□□□□ -0.3
UFD1-206ENST00000466373 TWISTNBQ3B726 338 aaPredicted RBP13.15□□□□□ -0.3
UFD1-206ENST00000466373 MRPL50Q8N5N7 158 aaKnown RBP13.15□□□□□ -0.3
UFD1-206ENST00000466373 IFT57Q9NWB7 429 aa13.15□□□□□ -0.3
UFD1-206ENST00000466373 SULT6B1Q6IMI4 303 aa13.14□□□□□ -0.31
UFD1-206ENST00000466373 TBC1D2Q9BYX2 928 aa13.14□□□□□ -0.31
UFD1-206ENST00000466373 LTKP29376 864 aa13.14□□□□□ -0.31
UFD1-206ENST00000466373 CALD1Q05682 793 aaKnown RBP13.14□□□□□ -0.31
UFD1-206ENST00000466373 CDK12Q9NYV4 1490 aaPredicted RBP13.13□□□□□ -0.31
UFD1-206ENST00000466373 KRT24Q2M2I5 525 aa13.13□□□□□ -0.31
UFD1-206ENST00000466373 IL27Q8NEV9 243 aa13.13□□□□□ -0.31
UFD1-206ENST00000466373 C22orf23Q9BZE7 217 aa13.13□□□□□ -0.31
UFD1-206ENST00000466373 ACEP12821 1306 aa13.13□□□□□ -0.31
UFD1-206ENST00000466373 TMEM2Q9UHN6 1383 aa13.13□□□□□ -0.31
UFD1-206ENST00000466373 ZBTB7BO15156 539 aaPredicted RBP13.13□□□□□ -0.31
UFD1-206ENST00000466373 ANKRD45Q5TZF3 282 aa13.13□□□□□ -0.31
UFD1-206ENST00000466373 CFAP44Q96MT7 982 aa13.13□□□□□ -0.31
UFD1-206ENST00000466373 EIF4A2Q14240 407 aaKnown RBP13.12□□□□□ -0.31
UFD1-206ENST00000466373 ZNF692Q9BU19 519 aaPredicted RBP13.12□□□□□ -0.31
UFD1-206ENST00000466373 AATKQ6ZMQ8 1374 aa13.12□□□□□ -0.31
UFD1-206ENST00000466373 ZNF853P0CG23 659 aa13.12□□□□□ -0.31
UFD1-206ENST00000466373 NUCB1Q02818 461 aa13.12□□□□□ -0.31
UFD1-206ENST00000466373 HSP90AB2PQ58FF8 381 aa13.12□□□□□ -0.31
UFD1-206ENST00000466373 CHD1LQ86WJ1 897 aa13.11□□□□□ -0.31
UFD1-206ENST00000466373 TTC21BQ7Z4L5 1316 aa13.11□□□□□ -0.31
UFD1-206ENST00000466373 MCM10Q7L590 875 aa13.11□□□□□ -0.31
UFD1-206ENST00000466373 DLG5Q8TDM6 1919 aa13.11□□□□□ -0.31
UFD1-206ENST00000466373 ZNF428Q96B54 188 aa13.11□□□□□ -0.31
UFD1-206ENST00000466373 RTN4Q9NQC3 1192 aaKnown RBP13.11□□□□□ -0.31
UFD1-206ENST00000466373 LMOD3Q0VAK6 560 aa13.1□□□□□ -0.31
UFD1-206ENST00000466373 BRPF1P55201 1214 aaPredicted RBP13.09□□□□□ -0.31
UFD1-206ENST00000466373 KIF13AQ9H1H9 1805 aa13.09□□□□□ -0.31
UFD1-206ENST00000466373 SIRT2Q8IXJ6 389 aa13.09□□□□□ -0.31
UFD1-206ENST00000466373 MON2Q7Z3U7 1717 aa13.09□□□□□ -0.31
UFD1-206ENST00000466373 TECPR2O15040 1411 aa13.09□□□□□ -0.31
UFD1-206ENST00000466373 SIRT1Q96EB6 747 aa13.09□□□□□ -0.31
UFD1-206ENST00000466373 ADAMTS13Q76LX8 1427 aa13.08□□□□□ -0.31
UFD1-206ENST00000466373 ANTXR1Q9H6X2 564 aa13.08□□□□□ -0.32
UFD1-206ENST00000466373 MIS18AQ9NYP9 233 aa13.08□□□□□ -0.32
UFD1-206ENST00000466373 ARHGAP45Q92619 1136 aa13.08□□□□□ -0.32
UFD1-206ENST00000466373 ITSN1Q15811 1721 aa13.08□□□□□ -0.32
UFD1-206ENST00000466373 BRPF3Q9ULD4 1205 aa13.07□□□□□ -0.32
UFD1-206ENST00000466373 C3P01024 1663 aa13.07□□□□□ -0.32
UFD1-206ENST00000466373 ABCC4O15439 1325 aa13.07□□□□□ -0.32
UFD1-206ENST00000466373 PTCH1Q13635 1447 aa13.07□□□□□ -0.32
UFD1-206ENST00000466373 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.06□□□□□ -0.32
UFD1-206ENST00000466373 UBR1Q8IWV7 1749 aa13.06□□□□□ -0.32
UFD1-206ENST00000466373 FOXO3O43524 673 aa13.06□□□□□ -0.32
UFD1-206ENST00000466373 AKAP12Q02952 1782 aa13.06□□□□□ -0.32
UFD1-206ENST00000466373 AMOTL2Q9Y2J4 779 aa13.06□□□□□ -0.32
UFD1-206ENST00000466373 API5Q9BZZ5 524 aaKnown RBP13.05□□□□□ -0.32
UFD1-206ENST00000466373 KNDC1Q76NI1 1749 aa13.05□□□□□ -0.32
UFD1-206ENST00000466373 GCC1Q96CN9 775 aa13.05□□□□□ -0.32
UFD1-206ENST00000466373 NUTM2GQ5VZR2 741 aa13.04□□□□□ -0.32
UFD1-206ENST00000466373 NGDNQ8NEJ9 315 aaKnown RBP13.04□□□□□ -0.32
UFD1-206ENST00000466373 EID1Q9Y6B2 187 aa13.04□□□□□ -0.32
UFD1-206ENST00000466373 PLEKHG3A1L390 1219 aa13.04□□□□□ -0.32
UFD1-206ENST00000466373 APBB1O00213 710 aa13.04□□□□□ -0.32
UFD1-206ENST00000466373 CHMP4BQ9H444 224 aaKnown RBP13.04□□□□□ -0.32
UFD1-206ENST00000466373 PIK3R4Q99570 1358 aa13.04□□□□□ -0.32
UFD1-206ENST00000466373 USP6P35125 1406 aa13.04□□□□□ -0.32
UFD1-206ENST00000466373 PTPRUQ92729 1446 aa13.04□□□□□ -0.32
UFD1-206ENST00000466373 MAP3K19Q56UN5 1328 aa13.03□□□□□ -0.32
UFD1-206ENST00000466373 BMP2KLQ5H9B9 411 aa13.03□□□□□ -0.32
UFD1-206ENST00000466373 OVOS2A0A0J9YW53 1432 aa13.03□□□□□ -0.32
UFD1-206ENST00000466373 OVOS2Q6IE36 1432 aa13.03□□□□□ -0.32
UFD1-206ENST00000466373 PLEKHG1Q9ULL1 1385 aa13.02□□□□□ -0.32
UFD1-206ENST00000466373 CHL1O00533 1208 aa13.02□□□□□ -0.33
UFD1-206ENST00000466373 HSCBQ8IWL3 235 aa13.02□□□□□ -0.33
UFD1-206ENST00000466373 ARXQ96QS3 562 aa13.02□□□□□ -0.33
UFD1-206ENST00000466373 C16orf71Q8IYS4 520 aaPredicted RBP13.02□□□□□ -0.33
UFD1-206ENST00000466373 AMPHP49418 695 aa13.01□□□□□ -0.33
UFD1-206ENST00000466373 MTHFSDQ2M296 383 aaKnown RBP13.01□□□□□ -0.33
UFD1-206ENST00000466373 TBC1D9Q6ZT07 1266 aa13.01□□□□□ -0.33
UFD1-206ENST00000466373 SLC4A2P04920 1241 aa13.01□□□□□ -0.33
UFD1-206ENST00000466373 PEAK1Q9H792 1746 aa13.01□□□□□ -0.33
UFD1-206ENST00000466373 SLC4A10Q6U841 1118 aa13□□□□□ -0.33
UFD1-206ENST00000466373 RTF1Q92541 710 aaKnown RBP12.99□□□□□ -0.33
UFD1-206ENST00000466373 MEIS3Q99687 375 aa12.99□□□□□ -0.33
UFD1-206ENST00000466373 FOXD4L1Q9NU39 408 aa12.99□□□□□ -0.33
UFD1-206ENST00000466373 TSPYL4Q9UJ04 414 aa12.99□□□□□ -0.33
UFD1-206ENST00000466373 F6X3S4 739 aa12.99□□□□□ -0.33
UFD1-206ENST00000466373 RBM25P49756 843 aaKnown RBP12.99□□□□□ -0.33
UFD1-206ENST00000466373 NLRP6P59044 892 aa12.99□□□□□ -0.33
UFD1-206ENST00000466373 OTUD7AQ8TE49 926 aaPredicted RBP12.99□□□□□ -0.33
UFD1-206ENST00000466373 NECTIN2Q92692 538 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms