RNA–Protein interactions for RNA: ENST00000465659.5

ARHGEF3-204, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best)

Gene ARHGEF3, Length 2,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-204ENST00000465659 GCC1Q96CN9 775 aa16.06■□□□□ 0.16
ARHGEF3-204ENST00000465659 DLG5Q8TDM6 1919 aa16.06■□□□□ 0.16
ARHGEF3-204ENST00000465659 BMP2KLQ5H9B9 411 aa16.05■□□□□ 0.16
ARHGEF3-204ENST00000465659 WASLO00401 505 aaPredicted RBP16.05■□□□□ 0.16
ARHGEF3-204ENST00000465659 ABCC4O15439 1325 aa16.05■□□□□ 0.16
ARHGEF3-204ENST00000465659 SNX21Q969T3 373 aa16.04■□□□□ 0.16
ARHGEF3-204ENST00000465659 DIP2BQ9P265 1576 aa16.04■□□□□ 0.16
ARHGEF3-204ENST00000465659 AKAP12Q02952 1782 aa16.04■□□□□ 0.16
ARHGEF3-204ENST00000465659 FBLN1P23142 703 aa16.04■□□□□ 0.16
ARHGEF3-204ENST00000465659 MCM4P33991 863 aa16.04■□□□□ 0.16
ARHGEF3-204ENST00000465659 LMOD3Q0VAK6 560 aa16.04■□□□□ 0.16
ARHGEF3-204ENST00000465659 SIRT1Q96EB6 747 aa16.04■□□□□ 0.16
ARHGEF3-204ENST00000465659 L1TD1Q5T7N2 865 aaKnown RBP16.03■□□□□ 0.16
ARHGEF3-204ENST00000465659 EMILIN1Q9Y6C2 1016 aa16.03■□□□□ 0.16
ARHGEF3-204ENST00000465659 TECPR2O15040 1411 aa16.03■□□□□ 0.16
ARHGEF3-204ENST00000465659 HMOX1P09601 288 aa16.03■□□□□ 0.16
ARHGEF3-204ENST00000465659 LNPKQ9C0E8 428 aa16.03■□□□□ 0.16
ARHGEF3-204ENST00000465659 C3P01024 1663 aa16.03■□□□□ 0.16
ARHGEF3-204ENST00000465659 KIF24Q5T7B8 1368 aa16.03■□□□□ 0.16
ARHGEF3-204ENST00000465659 HSCBQ8IWL3 235 aa16.02■□□□□ 0.16
ARHGEF3-204ENST00000465659 MBIPQ9NS73 344 aa16.02■□□□□ 0.16
ARHGEF3-204ENST00000465659 TSPYL6Q8N831 410 aa16.02■□□□□ 0.16
ARHGEF3-204ENST00000465659 CFAP44Q96MT7 982 aa16.02■□□□□ 0.16
ARHGEF3-204ENST00000465659 ZNF692Q9BU19 519 aaPredicted RBP16.02■□□□□ 0.16
ARHGEF3-204ENST00000465659 DDIT3P35638 169 aa16.02■□□□□ 0.15
ARHGEF3-204ENST00000465659 NME9Q86XW9 330 aa16.01■□□□□ 0.15
ARHGEF3-204ENST00000465659 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.01■□□□□ 0.15
ARHGEF3-204ENST00000465659 THUMPD2Q9BTF0 503 aaKnown RBP16.01■□□□□ 0.15
ARHGEF3-204ENST00000465659 NRKQ7Z2Y5 1582 aa16.01■□□□□ 0.15
ARHGEF3-204ENST00000465659 CPS1P31327 1500 aa16.01■□□□□ 0.15
ARHGEF3-204ENST00000465659 ITSN1Q15811 1721 aa16■□□□□ 0.15
ARHGEF3-204ENST00000465659 METP08581 1390 aa16■□□□□ 0.15
ARHGEF3-204ENST00000465659 FAM43AQ8N2R8 423 aa16■□□□□ 0.15
ARHGEF3-204ENST00000465659 TWISTNBQ3B726 338 aaPredicted RBP15.99■□□□□ 0.15
ARHGEF3-204ENST00000465659 API5Q9BZZ5 524 aaKnown RBP15.99■□□□□ 0.15
ARHGEF3-204ENST00000465659 SIRT2Q8IXJ6 389 aa15.99■□□□□ 0.15
ARHGEF3-204ENST00000465659 NUDT16Q96DE0 195 aaKnown RBP15.99■□□□□ 0.15
ARHGEF3-204ENST00000465659 COG3Q96JB2 828 aa15.99■□□□□ 0.15
ARHGEF3-204ENST00000465659 CCDC61Q9Y6R9 512 aa15.99■□□□□ 0.15
ARHGEF3-204ENST00000465659 ANKRD45Q5TZF3 282 aa15.98■□□□□ 0.15
ARHGEF3-204ENST00000465659 FSD2A1L4K1 749 aa15.98■□□□□ 0.15
ARHGEF3-204ENST00000465659 FAM69CQ0P6D2 419 aa15.98■□□□□ 0.15
ARHGEF3-204ENST00000465659 SPRYD3Q8NCJ5 442 aa15.98■□□□□ 0.15
ARHGEF3-204ENST00000465659 CIZ1Q9ULV3 898 aaPredicted RBP15.97■□□□□ 0.15
ARHGEF3-204ENST00000465659 C8orf58Q8NAV2 365 aa15.97■□□□□ 0.15
ARHGEF3-204ENST00000465659 ZRANB1Q9UGI0 708 aa15.97■□□□□ 0.15
ARHGEF3-204ENST00000465659 TSPOAP1O95153 1857 aa15.96■□□□□ 0.15
ARHGEF3-204ENST00000465659 KIF2CQ99661 725 aa15.96■□□□□ 0.15
ARHGEF3-204ENST00000465659 DDX11L8A8MPP1 907 aa15.95■□□□□ 0.14
ARHGEF3-204ENST00000465659 C1orf115Q9H7X2 142 aa15.95■□□□□ 0.14
ARHGEF3-204ENST00000465659 EIF5BO60841 1220 aaKnown RBP15.94■□□□□ 0.14
ARHGEF3-204ENST00000465659 TBC1D9Q6ZT07 1266 aa15.94■□□□□ 0.14
ARHGEF3-204ENST00000465659 TXNDC2Q86VQ3 553 aa15.94■□□□□ 0.14
ARHGEF3-204ENST00000465659 ELL2O00472 640 aaPredicted RBP15.93■□□□□ 0.14
ARHGEF3-204ENST00000465659 TRAK2O60296 914 aa15.93■□□□□ 0.14
ARHGEF3-204ENST00000465659 GOLGA6L3A6NEY3 463 aa15.93■□□□□ 0.14
ARHGEF3-204ENST00000465659 HDGFP51858 240 aaKnown RBP15.93■□□□□ 0.14
ARHGEF3-204ENST00000465659 HAP1P54257 671 aaPredicted RBP15.93■□□□□ 0.14
ARHGEF3-204ENST00000465659 RRS1Q15050 365 aaKnown RBP15.93■□□□□ 0.14
ARHGEF3-204ENST00000465659 INTS3Q68E01 1043 aaKnown RBP15.93■□□□□ 0.14
ARHGEF3-204ENST00000465659 CYB5RLQ6IPT4 315 aa15.93■□□□□ 0.14
ARHGEF3-204ENST00000465659 TOPAZ1Q8N9V7 1692 aa15.92■□□□□ 0.14
ARHGEF3-204ENST00000465659 KIAA0232Q92628 1395 aa15.92■□□□□ 0.14
ARHGEF3-204ENST00000465659 FAM83GA6ND36 823 aa15.91■□□□□ 0.14
ARHGEF3-204ENST00000465659 DCTPP1Q9H773 170 aa15.91■□□□□ 0.14
ARHGEF3-204ENST00000465659 RGPD1P0DJD0 1748 aa15.91■□□□□ 0.14
ARHGEF3-204ENST00000465659 NALCNQ8IZF0 1738 aa15.91■□□□□ 0.14
ARHGEF3-204ENST00000465659 PRR36Q9H6K5 1346 aa15.91■□□□□ 0.14
ARHGEF3-204ENST00000465659 CDC45O75419 566 aa15.91■□□□□ 0.14
ARHGEF3-204ENST00000465659 RGS12O14924 1447 aa15.91■□□□□ 0.14
ARHGEF3-204ENST00000465659 NCKAP5LQ9HCH0 1330 aa15.9■□□□□ 0.14
ARHGEF3-204ENST00000465659 XRCC6P12956 609 aaKnown RBP eCLIP15.9■□□□□ 0.14
ARHGEF3-204ENST00000465659 ANO8Q9HCE9 1232 aaPredicted RBP15.9■□□□□ 0.14
ARHGEF3-204ENST00000465659 ISY1Q9ULR0 285 aaKnown RBP15.9■□□□□ 0.14
ARHGEF3-204ENST00000465659 OVOS2A0A0J9YW53 1432 aa15.9■□□□□ 0.14
ARHGEF3-204ENST00000465659 OVOS2Q6IE36 1432 aa15.9■□□□□ 0.14
ARHGEF3-204ENST00000465659 CHL1O00533 1208 aa15.9■□□□□ 0.14
ARHGEF3-204ENST00000465659 HSP90AB1P08238 724 aaKnown RBP15.9■□□□□ 0.14
ARHGEF3-204ENST00000465659 RAB3GAP1Q15042 981 aa15.9■□□□□ 0.14
ARHGEF3-204ENST00000465659 EIF4A2Q14240 407 aaKnown RBP15.89■□□□□ 0.13
ARHGEF3-204ENST00000465659 PLEKHM2Q8IWE5 1019 aa15.89■□□□□ 0.13
ARHGEF3-204ENST00000465659 ATP10DQ9P241 1426 aa15.89■□□□□ 0.13
ARHGEF3-204ENST00000465659 K7ELQ4 463 aaPredicted RBP15.88■□□□□ 0.13
ARHGEF3-204ENST00000465659 DCTN1Q14203 1278 aa15.88■□□□□ 0.13
ARHGEF3-204ENST00000465659 UBR1Q8IWV7 1749 aa15.88■□□□□ 0.13
ARHGEF3-204ENST00000465659 ANKRD44Q8N8A2 993 aa15.88■□□□□ 0.13
ARHGEF3-204ENST00000465659 TNPO1Q92973 898 aaKnown RBP15.88■□□□□ 0.13
ARHGEF3-204ENST00000465659 GSPT1P15170 499 aaKnown RBP15.88■□□□□ 0.13
ARHGEF3-204ENST00000465659 PTMSP20962 102 aa15.88■□□□□ 0.13
ARHGEF3-204ENST00000465659 TTC21BQ7Z4L5 1316 aa15.87■□□□□ 0.13
ARHGEF3-204ENST00000465659 RPAP2Q8IXW5 612 aaPredicted RBP15.87■□□□□ 0.13
ARHGEF3-204ENST00000465659 TMEM2Q9UHN6 1383 aa15.87■□□□□ 0.13
ARHGEF3-204ENST00000465659 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.87■□□□□ 0.13
ARHGEF3-204ENST00000465659 PTPRCP08575 1304 aa15.87■□□□□ 0.13
ARHGEF3-204ENST00000465659 PEAK1Q9H792 1746 aa15.87■□□□□ 0.13
ARHGEF3-204ENST00000465659 PLEKHG3A1L390 1219 aa15.87■□□□□ 0.13
ARHGEF3-204ENST00000465659 GBP4Q96PP9 640 aa15.87■□□□□ 0.13
ARHGEF3-204ENST00000465659 USP31Q70CQ4 1352 aa15.87■□□□□ 0.13
ARHGEF3-204ENST00000465659 ROBO2Q9HCK4 1378 aa15.87■□□□□ 0.13
ARHGEF3-204ENST00000465659 MRE11P49959 708 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms