RNA–Protein interactions for RNA: ENST00000465167.1

SSBP1-204, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 517 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-204ENST00000465167 FGD6Q6ZV73 1430 aa8.91□□□□□ -0.98
SSBP1-204ENST00000465167 ST18O60284 1047 aa8.91□□□□□ -0.98
SSBP1-204ENST00000465167 DNAJB2P25686 324 aa8.91□□□□□ -0.98
SSBP1-204ENST00000465167 PSEN2P49810 448 aa8.91□□□□□ -0.98
SSBP1-204ENST00000465167 PIP4K2BP78356 416 aa8.91□□□□□ -0.98
SSBP1-204ENST00000465167 SKIV2LQ15477 1246 aaKnown RBP8.91□□□□□ -0.98
SSBP1-204ENST00000465167 ZBED2Q9BTP6 218 aa8.91□□□□□ -0.98
SSBP1-204ENST00000465167 PLSCR2Q9NRY7 297 aa8.91□□□□□ -0.98
SSBP1-204ENST00000465167 EID1Q9Y6B2 187 aa8.91□□□□□ -0.98
SSBP1-204ENST00000465167 UBR1Q8IWV7 1749 aa8.91□□□□□ -0.98
SSBP1-204ENST00000465167 SYNMO15061 1565 aa8.9□□□□□ -0.98
SSBP1-204ENST00000465167 MED14O60244 1454 aa8.9□□□□□ -0.98
SSBP1-204ENST00000465167 VARS2Q5ST30 1063 aaKnown RBP8.9□□□□□ -0.98
SSBP1-204ENST00000465167 POTEEQ6S8J3 1075 aa8.9□□□□□ -0.98
SSBP1-204ENST00000465167 ABCC5O15440 1437 aa8.89□□□□□ -0.99
SSBP1-204ENST00000465167 SMAPO00193 183 aa8.89□□□□□ -0.99
SSBP1-204ENST00000465167 ARHGAP33O14559 1287 aa8.89□□□□□ -0.99
SSBP1-204ENST00000465167 TMEM134Q9H6X4 195 aa8.89□□□□□ -0.99
SSBP1-204ENST00000465167 KIAA1468Q9P260 1216 aa8.89□□□□□ -0.99
SSBP1-204ENST00000465167 VWDEQ8N2E2 1590 aa8.89□□□□□ -0.99
SSBP1-204ENST00000465167 SCAF11Q99590 1463 aaKnown RBP8.89□□□□□ -0.99
SSBP1-204ENST00000465167 ARHGAP31Q2M1Z3 1444 aa8.88□□□□□ -0.99
SSBP1-204ENST00000465167 CD46P15529 392 aa8.87□□□□□ -0.99
SSBP1-204ENST00000465167 FAM50AQ14320 339 aaKnown RBP8.87□□□□□ -0.99
SSBP1-204ENST00000465167 MYSM1Q5VVJ2 828 aa8.87□□□□□ -0.99
SSBP1-204ENST00000465167 SULF1Q8IWU6 871 aa8.87□□□□□ -0.99
SSBP1-204ENST00000465167 SLC4A5Q9BY07 1137 aa8.87□□□□□ -0.99
SSBP1-204ENST00000465167 TBC1D2Q9BYX2 928 aa8.87□□□□□ -0.99
SSBP1-204ENST00000465167 CHIC2Q9UKJ5 165 aa8.87□□□□□ -0.99
SSBP1-204ENST00000465167 PIK3C2BO00750 1634 aa8.87□□□□□ -0.99
SSBP1-204ENST00000465167 KDM5AP29375 1690 aaKnown RBP8.86□□□□□ -0.99
SSBP1-204ENST00000465167 SOCS7O14512 581 aa8.86□□□□□ -0.99
SSBP1-204ENST00000465167 EMP3P54852 163 aa8.86□□□□□ -0.99
SSBP1-204ENST00000465167 MYT1Q01538 1121 aa8.86□□□□□ -0.99
SSBP1-204ENST00000465167 DIXDC1Q155Q3 683 aa8.86□□□□□ -0.99
SSBP1-204ENST00000465167 TXNDC2Q86VQ3 553 aa8.86□□□□□ -0.99
SSBP1-204ENST00000465167 PROCA1Q8NCQ7 364 aaPredicted RBP8.86□□□□□ -0.99
SSBP1-204ENST00000465167 POLR3EQ9NVU0 708 aa8.86□□□□□ -0.99
SSBP1-204ENST00000465167 RABGEF1Q9UJ41 708 aa8.86□□□□□ -0.99
SSBP1-204ENST00000465167 SLIT1O75093 1534 aa8.85□□□□□ -0.99
SSBP1-204ENST00000465167 EFCAB6Q5THR3 1501 aa8.85□□□□□ -0.99
SSBP1-204ENST00000465167 DDX11L8A8MPP1 907 aa8.85□□□□□ -0.99
SSBP1-204ENST00000465167 DMRTA1Q5VZB9 504 aa8.85□□□□□ -0.99
SSBP1-204ENST00000465167 MARVELD3Q96A59 401 aa8.85□□□□□ -0.99
SSBP1-204ENST00000465167 AXIN2Q9Y2T1 843 aa8.85□□□□□ -0.99
SSBP1-204ENST00000465167 LMTK2Q8IWU2 1503 aa8.85□□□□□ -0.99
SSBP1-204ENST00000465167 HSPA1LP34931 641 aa8.84□□□□□ -0.99
SSBP1-204ENST00000465167 PBX2P40425 430 aa8.84□□□□□ -0.99
SSBP1-204ENST00000465167 ILDR2Q71H61 639 aa8.84□□□□□ -0.99
SSBP1-204ENST00000465167 ZNF687Q8N1G0 1237 aa8.84□□□□□ -0.99
SSBP1-204ENST00000465167 SPIRE2Q8WWL2 714 aa8.84□□□□□ -0.99
SSBP1-204ENST00000465167 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.84□□□□□ -0.99
SSBP1-204ENST00000465167 ADGRL2O95490 1459 aa8.83□□□□□ -1
SSBP1-204ENST00000465167 ARHGAP23Q9P227 1491 aa8.83□□□□□ -1
SSBP1-204ENST00000465167 MED1Q15648 1581 aaPredicted RBP8.83□□□□□ -1
SSBP1-204ENST00000465167 FAM205CA6NFA0 338 aa8.83□□□□□ -1
SSBP1-204ENST00000465167 CLK2P49760 499 aaKnown RBP8.83□□□□□ -1
SSBP1-204ENST00000465167 FLIIQ13045 1269 aa8.83□□□□□ -1
SSBP1-204ENST00000465167 ZMYND15Q9H091 742 aa8.83□□□□□ -1
SSBP1-204ENST00000465167 LRRC7Q96NW7 1537 aa8.83□□□□□ -1
SSBP1-204ENST00000465167 STRCP1A6NGW2 1772 aa8.83□□□□□ -1
SSBP1-204ENST00000465167 TMEM2Q9UHN6 1383 aa8.83□□□□□ -1
SSBP1-204ENST00000465167 GCC2Q8IWJ2 1684 aa8.82□□□□□ -1
SSBP1-204ENST00000465167 ANKRD50Q9ULJ7 1429 aa8.82□□□□□ -1
SSBP1-204ENST00000465167 ADGRB3O60242 1522 aa8.82□□□□□ -1
SSBP1-204ENST00000465167 HDGFP51858 240 aaKnown RBP8.82□□□□□ -1
SSBP1-204ENST00000465167 RPRD2Q5VT52 1461 aaKnown RBP8.82□□□□□ -1
SSBP1-204ENST00000465167 TET3O43151 1660 aa8.81□□□□□ -1
SSBP1-204ENST00000465167 PPP1R15AO75807 674 aaPredicted RBP8.81□□□□□ -1
SSBP1-204ENST00000465167 NUTM1Q86Y26 1132 aa8.81□□□□□ -1
SSBP1-204ENST00000465167 FAM163AQ96GL9 167 aaPredicted RBP8.81□□□□□ -1
SSBP1-204ENST00000465167 VPS9D1Q9Y2B5 631 aa8.81□□□□□ -1
SSBP1-204ENST00000465167 LTKP29376 864 aa8.8□□□□□ -1
SSBP1-204ENST00000465167 SLC52A1Q9NWF4 448 aa8.8□□□□□ -1
SSBP1-204ENST00000465167 LIMD1Q9UGP4 676 aa8.8□□□□□ -1
SSBP1-204ENST00000465167 SEPT9Q9UHD8 586 aaPredicted RBP8.8□□□□□ -1
SSBP1-204ENST00000465167 POTEB3A0JP26 581 aa8.79□□□□□ -1
SSBP1-204ENST00000465167 IDI1Q13907 227 aa8.79□□□□□ -1
SSBP1-204ENST00000465167 SWT1Q5T5J6 900 aaKnown RBP8.79□□□□□ -1
SSBP1-204ENST00000465167 POTEBQ6S5H4 581 aa8.79□□□□□ -1
SSBP1-204ENST00000465167 RIC3Q7Z5B4 369 aa8.79□□□□□ -1
SSBP1-204ENST00000465167 RDH13Q8NBN7 331 aa8.79□□□□□ -1
SSBP1-204ENST00000465167 UNC13BO14795 1591 aa8.78□□□□□ -1
SSBP1-204ENST00000465167 MYO5BQ9ULV0 1848 aa8.78□□□□□ -1
SSBP1-204ENST00000465167 SPTLC1O15269 473 aa8.78□□□□□ -1
SSBP1-204ENST00000465167 FAM98CQ17RN3 349 aaKnown RBP8.78□□□□□ -1
SSBP1-204ENST00000465167 TUSC1Q2TAM9 212 aa8.78□□□□□ -1
SSBP1-204ENST00000465167 PROSER2Q86WR7 435 aaPredicted RBP8.78□□□□□ -1
SSBP1-204ENST00000465167 HS3ST6Q96QI5 342 aa8.78□□□□□ -1
SSBP1-204ENST00000465167 NOS1P29475 1434 aa8.78□□□□□ -1
SSBP1-204ENST00000465167 XIRP1Q702N8 1843 aaKnown RBP8.77□□□□□ -1
SSBP1-204ENST00000465167 NKTRP30414 1462 aaKnown RBP8.77□□□□□ -1
SSBP1-204ENST00000465167 MSH6P52701 1360 aa8.77□□□□□ -1.01
SSBP1-204ENST00000465167 SLC10A3P09131 477 aa8.77□□□□□ -1.01
SSBP1-204ENST00000465167 GCGRP47871 477 aa8.77□□□□□ -1.01
SSBP1-204ENST00000465167 RSBN1LQ6PCB5 846 aaPredicted RBP8.77□□□□□ -1.01
SSBP1-204ENST00000465167 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.77□□□□□ -1.01
SSBP1-204ENST00000465167 ROCK1Q13464 1354 aa8.76□□□□□ -1.01
SSBP1-204ENST00000465167 MOXD2PA6NHM9 499 aa8.76□□□□□ -1.01
SSBP1-204ENST00000465167 BHMG1C9JSJ3 638 aaPredicted RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms