RNA–Protein interactions for RNA: ENST00000465057.5

CMTM1-207, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 797 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-207ENST00000465057 ZEB1P37275 1124 aaPredicted RBP8.63□□□□□ -1.03
CMTM1-207ENST00000465057 NKX2-3Q8TAU0 364 aa8.63□□□□□ -1.03
CMTM1-207ENST00000465057 ARHGEF5Q12774 1597 aa8.63□□□□□ -1.03
CMTM1-207ENST00000465057 RTEL1-TNFRSF6BF6WH68 1400 aa8.63□□□□□ -1.03
CMTM1-207ENST00000465057 PTPRKQ15262 1439 aa8.63□□□□□ -1.03
CMTM1-207ENST00000465057 VPS8Q8N3P4 1428 aa8.63□□□□□ -1.03
CMTM1-207ENST00000465057 DNMT1P26358 1616 aaKnown RBP8.62□□□□□ -1.03
CMTM1-207ENST00000465057 LOC105371045A0A1W2PR82 267 aa8.62□□□□□ -1.03
CMTM1-207ENST00000465057 GCGRP47871 477 aa8.62□□□□□ -1.03
CMTM1-207ENST00000465057 MDM2Q00987 491 aaPredicted RBP8.62□□□□□ -1.03
CMTM1-207ENST00000465057 CEP152O94986 1710 aa8.62□□□□□ -1.03
CMTM1-207ENST00000465057 LRRC9Q6ZRR7 1453 aa8.62□□□□□ -1.03
CMTM1-207ENST00000465057 CFAP65Q6ZU64 1925 aaKnown RBP8.62□□□□□ -1.03
CMTM1-207ENST00000465057 KDM5DQ9BY66 1539 aa8.61□□□□□ -1.03
CMTM1-207ENST00000465057 PPP1R18Q6NYC8 613 aa8.61□□□□□ -1.03
CMTM1-207ENST00000465057 CROCC2H7BZ55 1655 aa8.61□□□□□ -1.03
CMTM1-207ENST00000465057 DHX29Q7Z478 1369 aaKnown RBP8.61□□□□□ -1.03
CMTM1-207ENST00000465057 NR1I2O75469 434 aa8.6□□□□□ -1.03
CMTM1-207ENST00000465057 CD46P15529 392 aa8.6□□□□□ -1.03
CMTM1-207ENST00000465057 TMUB1Q9BVT8 246 aa8.6□□□□□ -1.03
CMTM1-207ENST00000465057 RNF17Q9BXT8 1623 aaKnown RBP8.6□□□□□ -1.03
CMTM1-207ENST00000465057 MAST1Q9Y2H9 1570 aa8.6□□□□□ -1.03
CMTM1-207ENST00000465057 ZC3H13Q5T200 1668 aaKnown RBP8.59□□□□□ -1.03
CMTM1-207ENST00000465057 PLA2R1Q13018 1463 aa8.59□□□□□ -1.03
CMTM1-207ENST00000465057 TCOF1Q13428 1488 aaKnown RBP8.59□□□□□ -1.03
CMTM1-207ENST00000465057 CLCN1P35523 988 aa8.59□□□□□ -1.03
CMTM1-207ENST00000465057 PUS10Q3MIT2 529 aaKnown RBP8.59□□□□□ -1.03
CMTM1-207ENST00000465057 SCUBE3Q8IX30 993 aa8.59□□□□□ -1.03
CMTM1-207ENST00000465057 GPCPD1Q9NPB8 672 aa8.59□□□□□ -1.03
CMTM1-207ENST00000465057 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.59□□□□□ -1.03
CMTM1-207ENST00000465057 NEURL4Q96JN8 1562 aa8.59□□□□□ -1.03
CMTM1-207ENST00000465057 EIF2AK4Q9P2K8 1649 aaKnown RBP8.58□□□□□ -1.04
CMTM1-207ENST00000465057 A2ML1A8K2U0 1454 aa8.58□□□□□ -1.04
CMTM1-207ENST00000465057 KIF3BO15066 747 aa8.58□□□□□ -1.04
CMTM1-207ENST00000465057 ATP6V1AP38606 617 aa8.58□□□□□ -1.04
CMTM1-207ENST00000465057 FUT2Q10981 343 aa8.58□□□□□ -1.04
CMTM1-207ENST00000465057 FAM135AQ9P2D6 1515 aa8.58□□□□□ -1.04
CMTM1-207ENST00000465057 MROH1Q8NDA8 1641 aa8.58□□□□□ -1.04
CMTM1-207ENST00000465057 PZPP20742 1482 aa8.57□□□□□ -1.04
CMTM1-207ENST00000465057 GGCXP38435 758 aa8.57□□□□□ -1.04
CMTM1-207ENST00000465057 MORN1Q5T089 497 aa8.57□□□□□ -1.04
CMTM1-207ENST00000465057 KANK4Q5T7N3 995 aaPredicted RBP8.57□□□□□ -1.04
CMTM1-207ENST00000465057 PCGF6Q9BYE7 350 aa8.57□□□□□ -1.04
CMTM1-207ENST00000465057 ZNF335Q9H4Z2 1342 aaPredicted RBP8.56□□□□□ -1.04
CMTM1-207ENST00000465057 ABCC3O15438 1527 aa8.56□□□□□ -1.04
CMTM1-207ENST00000465057 MAP3K1Q13233 1512 aa8.56□□□□□ -1.04
CMTM1-207ENST00000465057 PTPN23Q9H3S7 1636 aa8.56□□□□□ -1.04
CMTM1-207ENST00000465057 TLL1O43897 1013 aa8.56□□□□□ -1.04
CMTM1-207ENST00000465057 FBXO31Q5XUX0 539 aaPredicted RBP8.56□□□□□ -1.04
CMTM1-207ENST00000465057 FAM217BQ9NTX9 383 aaPredicted RBP8.56□□□□□ -1.04
CMTM1-207ENST00000465057 IQSEC2Q5JU85 1478 aa8.56□□□□□ -1.04
CMTM1-207ENST00000465057 SPATA31D1Q6ZQQ2 1576 aa8.56□□□□□ -1.04
CMTM1-207ENST00000465057 MYOM3Q5VTT5 1437 aa8.55□□□□□ -1.04
CMTM1-207ENST00000465057 ADH1BP00325 375 aa8.55□□□□□ -1.04
CMTM1-207ENST00000465057 AMHR2Q16671 573 aa8.55□□□□□ -1.04
CMTM1-207ENST00000465057 GRIPAP1Q4V328 841 aa8.55□□□□□ -1.04
CMTM1-207ENST00000465057 REPIN1Q9BWE0 567 aaKnown RBP8.55□□□□□ -1.04
CMTM1-207ENST00000465057 TNRQ92752 1358 aa8.55□□□□□ -1.04
CMTM1-207ENST00000465057 IQGAP1P46940 1657 aa8.54□□□□□ -1.04
CMTM1-207ENST00000465057 UGGT1Q9NYU2 1555 aa8.54□□□□□ -1.04
CMTM1-207ENST00000465057 UBR1Q8IWV7 1749 aa8.54□□□□□ -1.04
CMTM1-207ENST00000465057 WASHC2CQ9Y4E1 1318 aa8.54□□□□□ -1.04
CMTM1-207ENST00000465057 STRCP1A6NGW2 1772 aa8.53□□□□□ -1.04
CMTM1-207ENST00000465057 KDM4AO75164 1064 aa8.53□□□□□ -1.04
CMTM1-207ENST00000465057 TSPY4P0CV99 314 aa8.53□□□□□ -1.04
CMTM1-207ENST00000465057 TSPY10P0CW01 314 aa8.53□□□□□ -1.04
CMTM1-207ENST00000465057 AK7Q96M32 723 aa8.53□□□□□ -1.04
CMTM1-207ENST00000465057 SLC27A5Q9Y2P5 690 aa8.53□□□□□ -1.04
CMTM1-207ENST00000465057 MIA2Q96PC5 1412 aa8.53□□□□□ -1.04
CMTM1-207ENST00000465057 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.52□□□□□ -1.05
CMTM1-207ENST00000465057 DEPDC5O75140 1603 aa8.52□□□□□ -1.05
CMTM1-207ENST00000465057 TRIM66O15016 1216 aa8.52□□□□□ -1.05
CMTM1-207ENST00000465057 THAP11Q96EK4 314 aa8.52□□□□□ -1.05
CMTM1-207ENST00000465057 SPSB2Q99619 263 aa8.52□□□□□ -1.05
CMTM1-207ENST00000465057 SALL2Q9Y467 1007 aaPredicted RBP8.52□□□□□ -1.05
CMTM1-207ENST00000465057 DUOX2Q9NRD8 1548 aa8.52□□□□□ -1.05
CMTM1-207ENST00000465057 VWDEQ8N2E2 1590 aa8.52□□□□□ -1.05
CMTM1-207ENST00000465057 ERVK-7P63135 1459 aa8.51□□□□□ -1.05
CMTM1-207ENST00000465057 NLRP1Q9C000 1473 aa8.51□□□□□ -1.05
CMTM1-207ENST00000465057 DISP3Q9P2K9 1392 aa8.51□□□□□ -1.05
CMTM1-207ENST00000465057 PRDM15P57071 1507 aaPredicted RBP8.51□□□□□ -1.05
CMTM1-207ENST00000465057 RNF223E7ERA6 249 aa8.51□□□□□ -1.05
CMTM1-207ENST00000465057 S1PR4O95977 384 aa8.51□□□□□ -1.05
CMTM1-207ENST00000465057 PRKCSHP14314 528 aaPredicted RBP8.51□□□□□ -1.05
CMTM1-207ENST00000465057 SSTR3P32745 418 aaPredicted RBP8.51□□□□□ -1.05
CMTM1-207ENST00000465057 USP46P62068 366 aa8.51□□□□□ -1.05
CMTM1-207ENST00000465057 PRKD2Q9BZL6 878 aa8.51□□□□□ -1.05
CMTM1-207ENST00000465057 SLC6A16Q9GZN6 736 aa8.51□□□□□ -1.05
CMTM1-207ENST00000465057 SHANK2Q9UPX8 1470 aa8.51□□□□□ -1.05
CMTM1-207ENST00000465057 FMNL1O95466 1100 aaPredicted RBP8.5□□□□□ -1.05
CMTM1-207ENST00000465057 TTLL12Q14166 644 aaPredicted RBP8.5□□□□□ -1.05
CMTM1-207ENST00000465057 TPRNQ4KMQ1 711 aa8.5□□□□□ -1.05
CMTM1-207ENST00000465057 V9GY48 417 aaPredicted RBP8.5□□□□□ -1.05
CMTM1-207ENST00000465057 PIK3C2BO00750 1634 aa8.5□□□□□ -1.05
CMTM1-207ENST00000465057 ABCC5O15440 1437 aa8.49□□□□□ -1.05
CMTM1-207ENST00000465057 DAPK1P53355 1430 aa8.49□□□□□ -1.05
CMTM1-207ENST00000465057 UBAP1LF5GYI3 381 aa8.49□□□□□ -1.05
CMTM1-207ENST00000465057 BRICD5Q6PL45 260 aa8.49□□□□□ -1.05
CMTM1-207ENST00000465057 ANKLE1Q8NAG6 615 aa8.49□□□□□ -1.05
CMTM1-207ENST00000465057 CPS1P31327 1500 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms