RNA–Protein interactions for RNA: ENST00000464469.2

ZNF28-205, Transcript of zinc finger protein 28, humanhuman

TSL 1 (best)

Gene ZNF28, Length 394 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF28-205ENST00000464469 PARD3Q8TEW0 1356 aa8.12□□□□□ -1.11
ZNF28-205ENST00000464469 NUTM2FA1L443 756 aa8.12□□□□□ -1.11
ZNF28-205ENST00000464469 PTGER2P43116 358 aa8.12□□□□□ -1.11
ZNF28-205ENST00000464469 AMER1Q5JTC6 1135 aaPredicted RBP8.12□□□□□ -1.11
ZNF28-205ENST00000464469 CC2D1BQ5T0F9 858 aaKnown RBP8.12□□□□□ -1.11
ZNF28-205ENST00000464469 CPSF1Q10570 1443 aaKnown RBP8.12□□□□□ -1.11
ZNF28-205ENST00000464469 EDC4Q6P2E9 1401 aaKnown RBP8.12□□□□□ -1.11
ZNF28-205ENST00000464469 A0A0C4DFX4 3053 aa8.11□□□□□ -1.11
ZNF28-205ENST00000464469 KIF1AQ12756 1690 aa8.11□□□□□ -1.11
ZNF28-205ENST00000464469 MYBBP1AQ9BQG0 1328 aaKnown RBP8.11□□□□□ -1.11
ZNF28-205ENST00000464469 ZNF526Q8TF50 670 aaPredicted RBP8.11□□□□□ -1.11
ZNF28-205ENST00000464469 CARD14Q9BXL6 1004 aa8.11□□□□□ -1.11
ZNF28-205ENST00000464469 C19orf44Q9H6X5 657 aa8.11□□□□□ -1.11
ZNF28-205ENST00000464469 PLEKHG3A1L390 1219 aa8.1□□□□□ -1.11
ZNF28-205ENST00000464469 KIF3CO14782 793 aa8.1□□□□□ -1.11
ZNF28-205ENST00000464469 ATF3P18847 181 aa8.1□□□□□ -1.11
ZNF28-205ENST00000464469 NBPF14Q5TI25 921 aa8.1□□□□□ -1.11
ZNF28-205ENST00000464469 ZNF692Q9BU19 519 aaPredicted RBP8.1□□□□□ -1.11
ZNF28-205ENST00000464469 POLR3AO14802 1390 aaPredicted RBP8.1□□□□□ -1.11
ZNF28-205ENST00000464469 ACEP12821 1306 aa8.09□□□□□ -1.11
ZNF28-205ENST00000464469 NGDNQ8NEJ9 315 aaKnown RBP8.09□□□□□ -1.11
ZNF28-205ENST00000464469 ABHD8Q96I13 439 aa8.09□□□□□ -1.11
ZNF28-205ENST00000464469 USP6P35125 1406 aa8.09□□□□□ -1.11
ZNF28-205ENST00000464469 ADCY9O60503 1353 aa8.09□□□□□ -1.12
ZNF28-205ENST00000464469 BRD4O60885 1362 aaPredicted RBP8.09□□□□□ -1.12
ZNF28-205ENST00000464469 CADPS2Q86UW7 1296 aa8.08□□□□□ -1.12
ZNF28-205ENST00000464469 NLRP13Q86W25 1043 aa8.08□□□□□ -1.12
ZNF28-205ENST00000464469 PMFBP1Q8TBY8 1022 aa8.08□□□□□ -1.12
ZNF28-205ENST00000464469 MRS2Q9HD23 443 aa8.08□□□□□ -1.12
ZNF28-205ENST00000464469 MST1RQ04912 1400 aa8.08□□□□□ -1.12
ZNF28-205ENST00000464469 C1orf167Q5SNV9 1468 aa8.07□□□□□ -1.12
ZNF28-205ENST00000464469 ESCO1Q5FWF5 840 aa8.07□□□□□ -1.12
ZNF28-205ENST00000464469 MORC1Q86VD1 984 aa8.07□□□□□ -1.12
ZNF28-205ENST00000464469 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.07□□□□□ -1.12
ZNF28-205ENST00000464469 PHF8Q9UPP1 1060 aa8.07□□□□□ -1.12
ZNF28-205ENST00000464469 COL22A1Q8NFW1 1626 aaPredicted RBP8.07□□□□□ -1.12
ZNF28-205ENST00000464469 TTC21AQ8NDW8 1320 aa8.06□□□□□ -1.12
ZNF28-205ENST00000464469 PIK3C2AO00443 1686 aa8.06□□□□□ -1.12
ZNF28-205ENST00000464469 MAP3K5Q99683 1374 aa8.06□□□□□ -1.12
ZNF28-205ENST00000464469 TTC21BQ7Z4L5 1316 aa8.05□□□□□ -1.12
ZNF28-205ENST00000464469 USP54Q70EL1 1684 aa8.05□□□□□ -1.12
ZNF28-205ENST00000464469 SSH2Q76I76 1423 aa8.05□□□□□ -1.12
ZNF28-205ENST00000464469 FYB1O15117 783 aa8.05□□□□□ -1.12
ZNF28-205ENST00000464469 ZBTB7AO95365 584 aa8.05□□□□□ -1.12
ZNF28-205ENST00000464469 PPP2R1AP30153 589 aa8.05□□□□□ -1.12
ZNF28-205ENST00000464469 GGNBP2Q9H3C7 697 aa8.05□□□□□ -1.12
ZNF28-205ENST00000464469 TRPM3Q9HCF6 1732 aaPredicted RBP8.05□□□□□ -1.12
ZNF28-205ENST00000464469 MAP2P11137 1827 aaKnown RBP8.05□□□□□ -1.12
ZNF28-205ENST00000464469 ONECUT3O60422 494 aaPredicted RBP8.04□□□□□ -1.12
ZNF28-205ENST00000464469 NME9Q86XW9 330 aa8.04□□□□□ -1.12
ZNF28-205ENST00000464469 DDX17Q92841 729 aaKnown RBP8.04□□□□□ -1.12
ZNF28-205ENST00000464469 COG3Q96JB2 828 aa8.04□□□□□ -1.12
ZNF28-205ENST00000464469 OVOS2A0A0J9YW53 1432 aa8.03□□□□□ -1.12
ZNF28-205ENST00000464469 OVOS2Q6IE36 1432 aa8.03□□□□□ -1.12
ZNF28-205ENST00000464469 TNNT2P45379 298 aaPredicted RBP8.03□□□□□ -1.12
ZNF28-205ENST00000464469 PSME1Q06323 249 aa8.03□□□□□ -1.12
ZNF28-205ENST00000464469 CCDC184Q52MB2 194 aa8.03□□□□□ -1.12
ZNF28-205ENST00000464469 UNC5CLQ8IV45 518 aa8.03□□□□□ -1.12
ZNF28-205ENST00000464469 YTHDC1Q96MU7 727 aaKnown RBP8.03□□□□□ -1.12
ZNF28-205ENST00000464469 ORAI2Q96SN7 254 aa8.03□□□□□ -1.12
ZNF28-205ENST00000464469 ALS2Q96Q42 1657 aa8.02□□□□□ -1.13
ZNF28-205ENST00000464469 PAK3O75914 559 aaPredicted RBP8.02□□□□□ -1.13
ZNF28-205ENST00000464469 PELP1Q8IZL8 1130 aaKnown RBP8.02□□□□□ -1.13
ZNF28-205ENST00000464469 CFAP53Q96M91 514 aa8.02□□□□□ -1.13
ZNF28-205ENST00000464469 PDGFDQ9GZP0 370 aaPredicted RBP8.02□□□□□ -1.13
ZNF28-205ENST00000464469 SLIT2O94813 1529 aa8.02□□□□□ -1.13
ZNF28-205ENST00000464469 NPHP3Q7Z494 1330 aa8.02□□□□□ -1.13
ZNF28-205ENST00000464469 USP31Q70CQ4 1352 aa8.01□□□□□ -1.13
ZNF28-205ENST00000464469 FOXO3O43524 673 aa8.01□□□□□ -1.13
ZNF28-205ENST00000464469 TOMM70O94826 608 aa8.01□□□□□ -1.13
ZNF28-205ENST00000464469 FAM182BQ5T319 152 aa8.01□□□□□ -1.13
ZNF28-205ENST00000464469 PRPF38BQ5VTL8 546 aaKnown RBP8.01□□□□□ -1.13
ZNF28-205ENST00000464469 FAM9BQ8IZU0 186 aa8.01□□□□□ -1.13
ZNF28-205ENST00000464469 PRDM10Q9NQV6 1147 aa8.01□□□□□ -1.13
ZNF28-205ENST00000464469 ATF5Q9Y2D1 282 aaPredicted RBP8.01□□□□□ -1.13
ZNF28-205ENST00000464469 CCDC85CA6NKD9 419 aa8□□□□□ -1.13
ZNF28-205ENST00000464469 MTHFSP49914 203 aa8□□□□□ -1.13
ZNF28-205ENST00000464469 WDR43Q15061 677 aaKnown RBP eCLIP8□□□□□ -1.13
ZNF28-205ENST00000464469 KRT28Q7Z3Y7 464 aa8□□□□□ -1.13
ZNF28-205ENST00000464469 ABTB2Q8N961 1025 aa8□□□□□ -1.13
ZNF28-205ENST00000464469 SMG6Q86US8 1419 aaKnown RBP8□□□□□ -1.13
ZNF28-205ENST00000464469 PXDNQ92626 1479 aa8□□□□□ -1.13
ZNF28-205ENST00000464469 LTN1O94822 1766 aa7.99□□□□□ -1.13
ZNF28-205ENST00000464469 SBNO1A3KN83 1393 aa7.99□□□□□ -1.13
ZNF28-205ENST00000464469 APBA3O96018 575 aa7.99□□□□□ -1.13
ZNF28-205ENST00000464469 NLRP6P59044 892 aa7.99□□□□□ -1.13
ZNF28-205ENST00000464469 XPCQ01831 940 aaPredicted RBP7.99□□□□□ -1.13
ZNF28-205ENST00000464469 TNS3Q68CZ2 1445 aa7.99□□□□□ -1.13
ZNF28-205ENST00000464469 PNISRQ8TF01 805 aaKnown RBP7.99□□□□□ -1.13
ZNF28-205ENST00000464469 PHRF1Q9P1Y6 1649 aaKnown RBP7.99□□□□□ -1.13
ZNF28-205ENST00000464469 NUTM2GQ5VZR2 741 aa7.98□□□□□ -1.13
ZNF28-205ENST00000464469 LMOD2Q6P5Q4 547 aa7.98□□□□□ -1.13
ZNF28-205ENST00000464469 SGIP1Q9BQI5 828 aa7.98□□□□□ -1.13
ZNF28-205ENST00000464469 COL3A1P02461 1466 aaPredicted RBP7.98□□□□□ -1.13
ZNF28-205ENST00000464469 SLIT3O75094 1523 aa7.98□□□□□ -1.13
ZNF28-205ENST00000464469 NFAT5O94916 1531 aa7.98□□□□□ -1.13
ZNF28-205ENST00000464469 PEAK1Q9H792 1746 aa7.98□□□□□ -1.13
ZNF28-205ENST00000464469 CRYBG1Q9Y4K1 1723 aa7.98□□□□□ -1.13
ZNF28-205ENST00000464469 ARHGEF10O15013 1369 aa7.97□□□□□ -1.13
ZNF28-205ENST00000464469 INSRP06213 1382 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms