RNA–Protein interactions for RNA: ENST00000464025.5

LMO2-204, Transcript of LIM domain only 2, humanhuman

TSL 1 (best)

Gene LMO2, Length 1,550 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-204ENST00000464025 RGPD1P0DJD0 1748 aa22.46■■□□□ 1.19
LMO2-204ENST00000464025 USP54Q70EL1 1684 aa22.45■■□□□ 1.19
LMO2-204ENST00000464025 PMFBP1Q8TBY8 1022 aa22.45■■□□□ 1.18
LMO2-204ENST00000464025 HMOX1P09601 288 aa22.44■■□□□ 1.18
LMO2-204ENST00000464025 RLBP1P12271 317 aa22.44■■□□□ 1.18
LMO2-204ENST00000464025 MVPQ14764 893 aaKnown RBP22.43■■□□□ 1.18
LMO2-204ENST00000464025 PEAK1Q9H792 1746 aa22.43■■□□□ 1.18
LMO2-204ENST00000464025 IFT57Q9NWB7 429 aa22.43■■□□□ 1.18
LMO2-204ENST00000464025 IGHDP01880 384 aa22.42■■□□□ 1.18
LMO2-204ENST00000464025 ZNF853P0CG23 659 aa22.42■■□□□ 1.18
LMO2-204ENST00000464025 SSH1Q8WYL5 1049 aa22.42■■□□□ 1.18
LMO2-204ENST00000464025 IPO9Q96P70 1041 aaKnown RBP22.42■■□□□ 1.18
LMO2-204ENST00000464025 SMC4Q9NTJ3 1288 aa22.42■■□□□ 1.18
LMO2-204ENST00000464025 GNAI1P63096 354 aa22.42■■□□□ 1.18
LMO2-204ENST00000464025 DZIP1LQ8IYY4 767 aaKnown RBP22.42■■□□□ 1.18
LMO2-204ENST00000464025 BCL2L13Q9BXK5 485 aa22.42■■□□□ 1.18
LMO2-204ENST00000464025 KIF16BQ96L93 1317 aa22.41■■□□□ 1.18
LMO2-204ENST00000464025 EIF4A2Q14240 407 aaKnown RBP22.4■■□□□ 1.18
LMO2-204ENST00000464025 PLPPR3Q6T4P5 718 aa22.4■■□□□ 1.18
LMO2-204ENST00000464025 ANKLE2Q86XL3 938 aa22.4■■□□□ 1.18
LMO2-204ENST00000464025 KCNA6P17658 529 aa22.39■■□□□ 1.18
LMO2-204ENST00000464025 ATF7IPQ6VMQ6 1270 aa22.39■■□□□ 1.18
LMO2-204ENST00000464025 IPO8O15397 1037 aaKnown RBP22.38■■□□□ 1.17
LMO2-204ENST00000464025 TNNQ9UQP3 1299 aa22.38■■□□□ 1.17
LMO2-204ENST00000464025 PIK3C2AO00443 1686 aa22.38■■□□□ 1.17
LMO2-204ENST00000464025 KIF24Q5T7B8 1368 aa22.38■■□□□ 1.17
LMO2-204ENST00000464025 NUTM2FA1L443 756 aa22.38■■□□□ 1.17
LMO2-204ENST00000464025 TRIM27P14373 513 aa22.37■■□□□ 1.17
LMO2-204ENST00000464025 FAM161AQ3B820 660 aa22.37■■□□□ 1.17
LMO2-204ENST00000464025 FTSJ3Q8IY81 847 aaKnown RBP22.37■■□□□ 1.17
LMO2-204ENST00000464025 NGDNQ8NEJ9 315 aaKnown RBP22.37■■□□□ 1.17
LMO2-204ENST00000464025 SKAP1Q86WV1 359 aa22.36■■□□□ 1.17
LMO2-204ENST00000464025 CFAP44Q96MT7 982 aa22.36■■□□□ 1.17
LMO2-204ENST00000464025 DDX19BQ9UMR2 479 aa22.36■■□□□ 1.17
LMO2-204ENST00000464025 PCDHB15Q9Y5E8 787 aa22.36■■□□□ 1.17
LMO2-204ENST00000464025 SBNO1A3KN83 1393 aa22.35■■□□□ 1.17
LMO2-204ENST00000464025 ARHGEF10O15013 1369 aa22.35■■□□□ 1.17
LMO2-204ENST00000464025 VIRMAQ69YN4 1812 aaKnown RBP22.35■■□□□ 1.17
LMO2-204ENST00000464025 RWDD1Q9H446 243 aaPredicted RBP22.34■■□□□ 1.17
LMO2-204ENST00000464025 NOP58Q9Y2X3 529 aaKnown RBP22.34■■□□□ 1.17
LMO2-204ENST00000464025 MARF1Q9Y4F3 1742 aaKnown RBP22.34■■□□□ 1.17
LMO2-204ENST00000464025 FLT4P35916 1363 aa22.34■■□□□ 1.17
LMO2-204ENST00000464025 VAMP4O75379 141 aa22.33■■□□□ 1.17
LMO2-204ENST00000464025 ERICH6Q7L0X2 663 aa22.33■■□□□ 1.17
LMO2-204ENST00000464025 ARHGAP45Q92619 1136 aa22.33■■□□□ 1.17
LMO2-204ENST00000464025 NOB1Q9ULX3 412 aaKnown RBP22.33■■□□□ 1.17
LMO2-204ENST00000464025 C8orf34Q49A92 452 aa22.32■■□□□ 1.16
LMO2-204ENST00000464025 MAP3K19Q56UN5 1328 aa22.32■■□□□ 1.16
LMO2-204ENST00000464025 HSP90AB2PQ58FF8 381 aa22.31■■□□□ 1.16
LMO2-204ENST00000464025 SULT6B1Q6IMI4 303 aa22.31■■□□□ 1.16
LMO2-204ENST00000464025 MBIPQ9NS73 344 aa22.3■■□□□ 1.16
LMO2-204ENST00000464025 KDRP35968 1356 aa22.3■■□□□ 1.16
LMO2-204ENST00000464025 HDAC1Q13547 482 aaPredicted RBP22.29■■□□□ 1.16
LMO2-204ENST00000464025 AEBP1Q8IUX7 1158 aa22.28■■□□□ 1.16
LMO2-204ENST00000464025 MRPL50Q8N5N7 158 aaKnown RBP22.28■■□□□ 1.16
LMO2-204ENST00000464025 THUMPD2Q9BTF0 503 aaKnown RBP22.28■■□□□ 1.16
LMO2-204ENST00000464025 ZBTB47Q9UFB7 747 aaPredicted RBP22.28■■□□□ 1.16
LMO2-204ENST00000464025 RGS3P49796 1198 aa22.27■■□□□ 1.16
LMO2-204ENST00000464025 LAS1LQ9Y4W2 734 aaKnown RBP22.27■■□□□ 1.16
LMO2-204ENST00000464025 ADGRL3Q9HAR2 1447 aa22.27■■□□□ 1.15
LMO2-204ENST00000464025 CHMP4BQ9H444 224 aaKnown RBP22.26■■□□□ 1.15
LMO2-204ENST00000464025 HAP1P54257 671 aaPredicted RBP22.25■■□□□ 1.15
LMO2-204ENST00000464025 TMEM57Q8N5G2 664 aa22.25■■□□□ 1.15
LMO2-204ENST00000464025 ZBTB40Q9NUA8 1239 aa22.25■■□□□ 1.15
LMO2-204ENST00000464025 IGSF1Q8N6C5 1336 aa22.25■■□□□ 1.15
LMO2-204ENST00000464025 ITPRIPQ8IWB1 547 aa22.25■■□□□ 1.15
LMO2-204ENST00000464025 NPHP4O75161 1426 aaPredicted RBP22.24■■□□□ 1.15
LMO2-204ENST00000464025 CHL1O00533 1208 aa22.24■■□□□ 1.15
LMO2-204ENST00000464025 TWISTNBQ3B726 338 aaPredicted RBP22.24■■□□□ 1.15
LMO2-204ENST00000464025 DDRGK1Q96HY6 314 aa22.24■■□□□ 1.15
LMO2-204ENST00000464025 NWD1Q149M9 1564 aa22.24■■□□□ 1.15
LMO2-204ENST00000464025 KIAA0232Q92628 1395 aa22.23■■□□□ 1.15
LMO2-204ENST00000464025 NLRP6P59044 892 aa22.23■■□□□ 1.15
LMO2-204ENST00000464025 TSPYL6Q8N831 410 aa22.23■■□□□ 1.15
LMO2-204ENST00000464025 FAM83GA6ND36 823 aa22.22■■□□□ 1.15
LMO2-204ENST00000464025 PHF8Q9UPP1 1060 aa22.22■■□□□ 1.15
LMO2-204ENST00000464025 AMPHP49418 695 aa22.21■■□□□ 1.15
LMO2-204ENST00000464025 PDZRN3Q9UPQ7 1066 aa22.21■■□□□ 1.15
LMO2-204ENST00000464025 RTL1A6NKG5 1358 aa22.21■■□□□ 1.15
LMO2-204ENST00000464025 PAK3O75914 559 aaPredicted RBP22.21■■□□□ 1.15
LMO2-204ENST00000464025 C8orf58Q8NAV2 365 aa22.21■■□□□ 1.15
LMO2-204ENST00000464025 CRB1P82279 1406 aa22.2■■□□□ 1.14
LMO2-204ENST00000464025 HTATSF1O43719 755 aaKnown RBP22.2■■□□□ 1.14
LMO2-204ENST00000464025 NPM2Q86SE8 214 aaKnown RBP22.2■■□□□ 1.14
LMO2-204ENST00000464025 ABCC4O15439 1325 aa22.19■■□□□ 1.14
LMO2-204ENST00000464025 SMC5Q8IY18 1101 aa22.19■■□□□ 1.14
LMO2-204ENST00000464025 DCTN1Q14203 1278 aa22.18■■□□□ 1.14
LMO2-204ENST00000464025 ABTB2Q8N961 1025 aa22.18■■□□□ 1.14
LMO2-204ENST00000464025 EYA1Q99502 592 aa22.18■■□□□ 1.14
LMO2-204ENST00000464025 PHRF1Q9P1Y6 1649 aaKnown RBP22.18■■□□□ 1.14
LMO2-204ENST00000464025 HOXC9P31274 260 aa22.17■■□□□ 1.14
LMO2-204ENST00000464025 GAS2L2Q8NHY3 880 aa22.17■■□□□ 1.14
LMO2-204ENST00000464025 API5Q9BZZ5 524 aaKnown RBP22.17■■□□□ 1.14
LMO2-204ENST00000464025 ZBTB7BO15156 539 aaPredicted RBP22.16■■□□□ 1.14
LMO2-204ENST00000464025 LTN1O94822 1766 aa22.15■■□□□ 1.14
LMO2-204ENST00000464025 SOX12O15370 315 aa22.15■■□□□ 1.14
LMO2-204ENST00000464025 MTHFSDQ2M296 383 aaKnown RBP22.15■■□□□ 1.14
LMO2-204ENST00000464025 LRRC37A3O60309 1634 aa22.15■■□□□ 1.14
LMO2-204ENST00000464025 NFAT5O94916 1531 aa22.14■■□□□ 1.13
LMO2-204ENST00000464025 ELL2O00472 640 aaPredicted RBP22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms