RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 MIA2Q96PC5 1412 aa4.8□□□□□ -1.64
COL8A1-205ENST00000463753 PPM1GO15355 546 aaPredicted RBP4.8□□□□□ -1.64
COL8A1-205ENST00000463753 DOK7Q18PE1 504 aa4.8□□□□□ -1.64
COL8A1-205ENST00000463753 EFCAB2Q5VUJ9 269 aa4.8□□□□□ -1.64
COL8A1-205ENST00000463753 EMILIN3Q9NT22 766 aa4.8□□□□□ -1.64
COL8A1-205ENST00000463753 CCDC18Q5T9S5 1454 aa4.79□□□□□ -1.64
COL8A1-205ENST00000463753 NALCNQ8IZF0 1738 aa4.79□□□□□ -1.64
COL8A1-205ENST00000463753 WDR90Q96KV7 1748 aa4.79□□□□□ -1.64
COL8A1-205ENST00000463753 ABCA3Q99758 1704 aa4.79□□□□□ -1.64
COL8A1-205ENST00000463753 GTF2E1P29083 439 aaPredicted RBP4.79□□□□□ -1.64
COL8A1-205ENST00000463753 PTGER2P43116 358 aa4.79□□□□□ -1.64
COL8A1-205ENST00000463753 HNRNPUQ00839 825 aaKnown RBP eCLIP4.79□□□□□ -1.64
COL8A1-205ENST00000463753 PRDM4Q9UKN5 801 aa4.79□□□□□ -1.64
COL8A1-205ENST00000463753 KIF1AQ12756 1690 aa4.79□□□□□ -1.64
COL8A1-205ENST00000463753 KCNV2Q8TDN2 545 aa4.79□□□□□ -1.64
COL8A1-205ENST00000463753 CHMP4AQ9BY43 222 aa4.79□□□□□ -1.64
COL8A1-205ENST00000463753 WDR70Q9NW82 654 aa4.79□□□□□ -1.64
COL8A1-205ENST00000463753 ARHGEF28Q8N1W1 1705 aaKnown RBP4.79□□□□□ -1.64
COL8A1-205ENST00000463753 CLIP1P30622 1438 aa4.79□□□□□ -1.64
COL8A1-205ENST00000463753 NRAPQ86VF7 1730 aa4.78□□□□□ -1.64
COL8A1-205ENST00000463753 SPDYE16A6NNV3 312 aaPredicted RBP4.78□□□□□ -1.64
COL8A1-205ENST00000463753 YY1P25490 414 aa4.78□□□□□ -1.64
COL8A1-205ENST00000463753 ARID3AQ99856 593 aa4.78□□□□□ -1.64
COL8A1-205ENST00000463753 PDIA6Q15084 440 aa4.78□□□□□ -1.64
COL8A1-205ENST00000463753 ZHX1Q9UKY1 873 aaPredicted RBP4.78□□□□□ -1.64
COL8A1-205ENST00000463753 CNGB1Q14028 1251 aaPredicted RBP4.77□□□□□ -1.65
COL8A1-205ENST00000463753 GPR153Q6NV75 609 aa4.77□□□□□ -1.65
COL8A1-205ENST00000463753 TROQ12816 1431 aaPredicted RBP4.77□□□□□ -1.65
COL8A1-205ENST00000463753 VGLL3A8MV65 326 aa4.77□□□□□ -1.65
COL8A1-205ENST00000463753 HOXB1P14653 301 aaPredicted RBP4.77□□□□□ -1.65
COL8A1-205ENST00000463753 CALD1Q05682 793 aaKnown RBP4.77□□□□□ -1.65
COL8A1-205ENST00000463753 NFKBIBQ15653 356 aa4.77□□□□□ -1.65
COL8A1-205ENST00000463753 STAC3Q96MF2 364 aa4.77□□□□□ -1.65
COL8A1-205ENST00000463753 SIN3AQ96ST3 1273 aa4.77□□□□□ -1.65
COL8A1-205ENST00000463753 PCDHGA4Q9Y5G9 962 aa4.77□□□□□ -1.65
COL8A1-205ENST00000463753 IPO4Q8TEX9 1081 aaKnown RBP4.76□□□□□ -1.65
COL8A1-205ENST00000463753 TRPM2O94759 1503 aa4.76□□□□□ -1.65
COL8A1-205ENST00000463753 CEP152O94986 1710 aa4.76□□□□□ -1.65
COL8A1-205ENST00000463753 TBC1D12O60347 775 aa4.76□□□□□ -1.65
COL8A1-205ENST00000463753 KCNA6P17658 529 aa4.76□□□□□ -1.65
COL8A1-205ENST00000463753 MSH6P52701 1360 aa4.75□□□□□ -1.65
COL8A1-205ENST00000463753 ANP32CO43423 234 aa4.75□□□□□ -1.65
COL8A1-205ENST00000463753 ZNF326Q5BKZ1 582 aaKnown RBP4.75□□□□□ -1.65
COL8A1-205ENST00000463753 LCE2DQ5TA82 110 aaPredicted RBP4.75□□□□□ -1.65
COL8A1-205ENST00000463753 RSPH4AQ5TD94 716 aa4.75□□□□□ -1.65
COL8A1-205ENST00000463753 FNBP4Q8N3X1 1017 aaPredicted RBP4.75□□□□□ -1.65
COL8A1-205ENST00000463753 RRBP1Q9P2E9 1410 aaKnown RBP4.75□□□□□ -1.65
COL8A1-205ENST00000463753 GLI3P10071 1580 aa4.75□□□□□ -1.65
COL8A1-205ENST00000463753 MYOM2P54296 1465 aa4.75□□□□□ -1.65
COL8A1-205ENST00000463753 ONECUT3O60422 494 aaPredicted RBP4.75□□□□□ -1.65
COL8A1-205ENST00000463753 BRD2P25440 801 aaKnown RBP4.75□□□□□ -1.65
COL8A1-205ENST00000463753 SLC4A3P48751 1232 aa4.75□□□□□ -1.65
COL8A1-205ENST00000463753 JMYQ8N9B5 988 aa4.75□□□□□ -1.65
COL8A1-205ENST00000463753 RGS19P49795 217 aa4.74□□□□□ -1.65
COL8A1-205ENST00000463753 HIRIP3Q9BW71 556 aaPredicted RBP4.74□□□□□ -1.65
COL8A1-205ENST00000463753 ARHGAP5Q13017 1502 aa4.74□□□□□ -1.65
COL8A1-205ENST00000463753 RIMBP2O15034 1052 aa4.74□□□□□ -1.65
COL8A1-205ENST00000463753 ESF1Q9H501 851 aaKnown RBP4.74□□□□□ -1.65
COL8A1-205ENST00000463753 PRDM10Q9NQV6 1147 aa4.74□□□□□ -1.65
COL8A1-205ENST00000463753 BCL9O00512 1426 aa4.74□□□□□ -1.65
COL8A1-205ENST00000463753 PIK3C2BO00750 1634 aa4.73□□□□□ -1.65
COL8A1-205ENST00000463753 PLCH1Q4KWH8 1693 aa4.73□□□□□ -1.65
COL8A1-205ENST00000463753 TULP4Q9NRJ4 1543 aa4.73□□□□□ -1.65
COL8A1-205ENST00000463753 TESPA1A2RU30 521 aaPredicted RBP4.73□□□□□ -1.65
COL8A1-205ENST00000463753 PDCL3Q9H2J4 239 aa4.73□□□□□ -1.65
COL8A1-205ENST00000463753 TRPM1Q7Z4N2 1603 aa4.73□□□□□ -1.65
COL8A1-205ENST00000463753 SLIT2O94813 1529 aa4.73□□□□□ -1.65
COL8A1-205ENST00000463753 THSD7BQ9C0I4 1608 aa4.73□□□□□ -1.65
COL8A1-205ENST00000463753 TRPC5Q9UL62 973 aaPredicted RBP4.73□□□□□ -1.65
COL8A1-205ENST00000463753 FRAT2O75474 233 aaPredicted RBP4.72□□□□□ -1.65
COL8A1-205ENST00000463753 CAMTA1Q9Y6Y1 1673 aa4.72□□□□□ -1.65
COL8A1-205ENST00000463753 PNPLA6Q8IY17 1366 aa4.72□□□□□ -1.65
COL8A1-205ENST00000463753 EVI5O60447 810 aa4.71□□□□□ -1.65
COL8A1-205ENST00000463753 DDRGK1Q96HY6 314 aa4.71□□□□□ -1.65
COL8A1-205ENST00000463753 ZNF830Q96NB3 372 aaPredicted RBP4.71□□□□□ -1.65
COL8A1-205ENST00000463753 DPYSL4O14531 572 aa4.71□□□□□ -1.66
COL8A1-205ENST00000463753 SECISBP2LQ93073 1101 aaKnown RBP4.71□□□□□ -1.66
COL8A1-205ENST00000463753 DHX29Q7Z478 1369 aaKnown RBP4.71□□□□□ -1.66
COL8A1-205ENST00000463753 COL14A1Q05707 1796 aaKnown RBP4.71□□□□□ -1.66
COL8A1-205ENST00000463753 PSDA5PKW4 1024 aaPredicted RBP4.71□□□□□ -1.66
COL8A1-205ENST00000463753 PLEKHD1A6NEE1 506 aa4.71□□□□□ -1.66
COL8A1-205ENST00000463753 ST18O60284 1047 aa4.71□□□□□ -1.66
COL8A1-205ENST00000463753 FTSJ3Q8IY81 847 aaKnown RBP4.71□□□□□ -1.66
COL8A1-205ENST00000463753 ANP32BQ92688 251 aaKnown RBP4.71□□□□□ -1.66
COL8A1-205ENST00000463753 PXDNLA1KZ92 1463 aa4.7□□□□□ -1.66
COL8A1-205ENST00000463753 CCER2I3L3R5 266 aa4.7□□□□□ -1.66
COL8A1-205ENST00000463753 TULP1O00294 542 aaPredicted RBP4.7□□□□□ -1.66
COL8A1-205ENST00000463753 PHF14O94880 888 aa4.7□□□□□ -1.66
COL8A1-205ENST00000463753 PLEKHG1Q9ULL1 1385 aa4.7□□□□□ -1.66
COL8A1-205ENST00000463753 ADAMTS7Q9UKP4 1686 aa4.7□□□□□ -1.66
COL8A1-205ENST00000463753 ADCY9O60503 1353 aa4.7□□□□□ -1.66
COL8A1-205ENST00000463753 PPP1R15AO75807 674 aaPredicted RBP4.7□□□□□ -1.66
COL8A1-205ENST00000463753 CLCN1P35523 988 aa4.7□□□□□ -1.66
COL8A1-205ENST00000463753 MAP3K9P80192 1104 aa4.7□□□□□ -1.66
COL8A1-205ENST00000463753 SENP3-EIF4A1A0A087X0R7 540 aa4.69□□□□□ -1.66
COL8A1-205ENST00000463753 E9PSI1 815 aa4.69□□□□□ -1.66
COL8A1-205ENST00000463753 ARSIQ5FYB1 569 aa4.69□□□□□ -1.66
COL8A1-205ENST00000463753 EPAS1Q99814 870 aa4.69□□□□□ -1.66
COL8A1-205ENST00000463753 FAM13BQ9NYF5 915 aa4.69□□□□□ -1.66
COL8A1-205ENST00000463753 PARP4Q9UKK3 1724 aaKnown RBP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms