RNA–Protein interactions for RNA: ENST00000462731.1

SGCE-209, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-209ENST00000462731 NFATC2IPQ8NCF5 419 aa8.47□□□□□ -1.05
SGCE-209ENST00000462731 UPF1Q92900 1129 aaKnown RBP eCLIP8.47□□□□□ -1.05
SGCE-209ENST00000462731 VTI1AQ96AJ9 217 aa8.47□□□□□ -1.05
SGCE-209ENST00000462731 FAN1Q9Y2M0 1017 aa8.47□□□□□ -1.05
SGCE-209ENST00000462731 PEX14O75381 377 aa8.46□□□□□ -1.06
SGCE-209ENST00000462731 GTF2F1P35269 517 aaKnown RBP eCLIP8.46□□□□□ -1.06
SGCE-209ENST00000462731 RALBP1Q15311 655 aa8.46□□□□□ -1.06
SGCE-209ENST00000462731 EAPPQ56P03 285 aaPredicted RBP8.46□□□□□ -1.06
SGCE-209ENST00000462731 C9orf131Q5VYM1 1079 aa8.46□□□□□ -1.06
SGCE-209ENST00000462731 THSD4Q6ZMP0 1018 aa8.46□□□□□ -1.06
SGCE-209ENST00000462731 TGIF2Q9GZN2 237 aa8.46□□□□□ -1.06
SGCE-209ENST00000462731 PIF1Q9H611 641 aa8.46□□□□□ -1.06
SGCE-209ENST00000462731 ADGRG1Q9Y653 693 aa8.46□□□□□ -1.06
SGCE-209ENST00000462731 USP17L15C9J2P7 530 aa8.45□□□□□ -1.06
SGCE-209ENST00000462731 USP17L10C9JJH3 530 aa8.45□□□□□ -1.06
SGCE-209ENST00000462731 USP17L13C9JLJ4 530 aa8.45□□□□□ -1.06
SGCE-209ENST00000462731 USP17L12C9JPN9 530 aa8.45□□□□□ -1.06
SGCE-209ENST00000462731 USP17L11C9JVI0 530 aa8.45□□□□□ -1.06
SGCE-209ENST00000462731 USP17L21D6R901 530 aa8.45□□□□□ -1.06
SGCE-209ENST00000462731 USP17L18D6R9N7 530 aa8.45□□□□□ -1.06
SGCE-209ENST00000462731 USP17L22D6RA61 530 aa8.45□□□□□ -1.06
SGCE-209ENST00000462731 USP17L17D6RBQ6 530 aa8.45□□□□□ -1.06
SGCE-209ENST00000462731 USP17L19D6RCP7 530 aa8.45□□□□□ -1.06
SGCE-209ENST00000462731 USP17L20D6RJB6 530 aa8.45□□□□□ -1.06
SGCE-209ENST00000462731 CENPBP07199 599 aaPredicted RBP8.45□□□□□ -1.06
SGCE-209ENST00000462731 MAPK1P28482 360 aa8.45□□□□□ -1.06
SGCE-209ENST00000462731 USP17L24Q0WX57 530 aa8.45□□□□□ -1.06
SGCE-209ENST00000462731 FAM161AQ3B820 660 aa8.45□□□□□ -1.06
SGCE-209ENST00000462731 SOGA3Q5TF21 947 aa8.45□□□□□ -1.06
SGCE-209ENST00000462731 METTL16Q86W50 562 aaKnown RBP8.45□□□□□ -1.06
SGCE-209ENST00000462731 NUTM1Q86Y26 1132 aa8.45□□□□□ -1.06
SGCE-209ENST00000462731 NT5DC4Q86YG4 428 aa8.45□□□□□ -1.06
SGCE-209ENST00000462731 GMLQ99445 158 aa8.45□□□□□ -1.06
SGCE-209ENST00000462731 DCTN4Q9UJW0 460 aa8.45□□□□□ -1.06
SGCE-209ENST00000462731 PCDHB15Q9Y5E8 787 aa8.45□□□□□ -1.06
SGCE-209ENST00000462731 C2orf72A6NCS6 295 aa8.44□□□□□ -1.06
SGCE-209ENST00000462731 EVI5O60447 810 aa8.44□□□□□ -1.06
SGCE-209ENST00000462731 CD46P15529 392 aa8.44□□□□□ -1.06
SGCE-209ENST00000462731 EIF4G2P78344 907 aaKnown RBP eCLIP8.44□□□□□ -1.06
SGCE-209ENST00000462731 RBL2Q08999 1139 aa8.44□□□□□ -1.06
SGCE-209ENST00000462731 TCEAL1Q15170 157 aa8.44□□□□□ -1.06
SGCE-209ENST00000462731 RNF187Q5TA31 235 aaPredicted RBP8.44□□□□□ -1.06
SGCE-209ENST00000462731 APBB1IPQ7Z5R6 666 aaPredicted RBP8.44□□□□□ -1.06
SGCE-209ENST00000462731 PLEKHM2Q8IWE5 1019 aa8.44□□□□□ -1.06
SGCE-209ENST00000462731 CCSER2Q9H7U1 834 aa8.44□□□□□ -1.06
SGCE-209ENST00000462731 CHPF2Q9P2E5 772 aa8.44□□□□□ -1.06
SGCE-209ENST00000462731 IQSEC3Q9UPP2 1182 aaPredicted RBP8.44□□□□□ -1.06
SGCE-209ENST00000462731 USP17L3A6NCW0 530 aa8.43□□□□□ -1.06
SGCE-209ENST00000462731 USP17L4A6NCW7 530 aa8.43□□□□□ -1.06
SGCE-209ENST00000462731 MAP3K7O43318 606 aa8.43□□□□□ -1.06
SGCE-209ENST00000462731 HSD3B2P26439 372 aa8.43□□□□□ -1.06
SGCE-209ENST00000462731 GNL2Q13823 731 aaKnown RBP8.43□□□□□ -1.06
SGCE-209ENST00000462731 LDLRAD1Q5T700 205 aa8.43□□□□□ -1.06
SGCE-209ENST00000462731 ZNF746Q6NUN9 644 aaPredicted RBP8.43□□□□□ -1.06
SGCE-209ENST00000462731 USP17L2Q6R6M4 530 aa8.43□□□□□ -1.06
SGCE-209ENST00000462731 USP17L1Q7RTZ2 530 aa8.43□□□□□ -1.06
SGCE-209ENST00000462731 CABLES1Q8TDN4 633 aa8.43□□□□□ -1.06
SGCE-209ENST00000462731 EPAS1Q99814 870 aa8.43□□□□□ -1.06
SGCE-209ENST00000462731 ZBTB3Q9H5J0 574 aa8.43□□□□□ -1.06
SGCE-209ENST00000462731 ZSWIM4Q9H7M6 989 aa8.43□□□□□ -1.06
SGCE-209ENST00000462731 METTL5Q9NRN9 209 aaKnown RBP8.43□□□□□ -1.06
SGCE-209ENST00000462731 H3BRB1 525 aa8.42□□□□□ -1.06
SGCE-209ENST00000462731 ITGAEP38570 1179 aa8.42□□□□□ -1.06
SGCE-209ENST00000462731 SWI5Q1ZZU3 235 aa8.42□□□□□ -1.06
SGCE-209ENST00000462731 RNF135Q8IUD6 432 aa8.42□□□□□ -1.06
SGCE-209ENST00000462731 PNMA1Q8ND90 353 aa8.42□□□□□ -1.06
SGCE-209ENST00000462731 FAM200AQ8TCP9 573 aa8.42□□□□□ -1.06
SGCE-209ENST00000462731 PLCD4Q9BRC7 762 aa8.42□□□□□ -1.06
SGCE-209ENST00000462731 TUT1Q9H6E5 874 aaKnown RBP8.42□□□□□ -1.06
SGCE-209ENST00000462731 ICMTO60725 284 aa8.41□□□□□ -1.06
SGCE-209ENST00000462731 CRTC2Q53ET0 693 aaPredicted RBP8.41□□□□□ -1.06
SGCE-209ENST00000462731 RGL4Q8IZJ4 473 aa8.41□□□□□ -1.06
SGCE-209ENST00000462731 CAPN10Q9HC96 672 aa8.41□□□□□ -1.06
SGCE-209ENST00000462731 TERF2IPQ9NYB0 399 aa8.41□□□□□ -1.06
SGCE-209ENST00000462731 VPS9D1Q9Y2B5 631 aa8.41□□□□□ -1.06
SGCE-209ENST00000462731 KDM4FA0A1W2PPD8 638 aa8.4□□□□□ -1.06
SGCE-209ENST00000462731 PPP1R3GB7ZBB8 358 aa8.4□□□□□ -1.06
SGCE-209ENST00000462731 U2SURPO15042 1029 aaKnown RBP8.4□□□□□ -1.06
SGCE-209ENST00000462731 CREB3O43889 395 aa8.4□□□□□ -1.06
SGCE-209ENST00000462731 NDUFV2P19404 249 aa8.4□□□□□ -1.06
SGCE-209ENST00000462731 GLYCTKQ8IVS8 523 aa8.4□□□□□ -1.06
SGCE-209ENST00000462731 COL4A3BPQ9Y5P4 624 aa8.4□□□□□ -1.06
SGCE-209ENST00000462731 GFRA3O60609 400 aa8.39□□□□□ -1.07
SGCE-209ENST00000462731 PHF14O94880 888 aa8.39□□□□□ -1.07
SGCE-209ENST00000462731 PTMSP20962 102 aa8.39□□□□□ -1.07
SGCE-209ENST00000462731 CTDSPL2Q05D32 466 aa8.39□□□□□ -1.07
SGCE-209ENST00000462731 PTK7Q13308 1070 aa8.39□□□□□ -1.07
SGCE-209ENST00000462731 ZNF787Q6DD87 383 aa8.39□□□□□ -1.07
SGCE-209ENST00000462731 LARP1Q6PKG0 1096 aaKnown RBP8.39□□□□□ -1.07
SGCE-209ENST00000462731 JAZF1Q86VZ6 243 aa8.39□□□□□ -1.07
SGCE-209ENST00000462731 CCAR1Q8IX12 1150 aaKnown RBP8.39□□□□□ -1.07
SGCE-209ENST00000462731 PMFBP1Q8TBY8 1022 aa8.39□□□□□ -1.07
SGCE-209ENST00000462731 PMM1Q92871 262 aa8.39□□□□□ -1.07
SGCE-209ENST00000462731 ZNF775Q96BV0 537 aaPredicted RBP8.39□□□□□ -1.07
SGCE-209ENST00000462731 OSBPL2Q9H1P3 480 aa8.39□□□□□ -1.07
SGCE-209ENST00000462731 A0A0U1RQG5 324 aaPredicted RBP8.38□□□□□ -1.07
SGCE-209ENST00000462731 USP17L5A8MUK1 530 aa8.38□□□□□ -1.07
SGCE-209ENST00000462731 PPP4R3BQ5MIZ7 849 aa8.38□□□□□ -1.07
SGCE-209ENST00000462731 SULF1Q8IWU6 871 aa8.38□□□□□ -1.07
SGCE-209ENST00000462731 TMEM87AQ8NBN3 555 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms