RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 PIK3R4Q99570 1358 aa4.38□□□□□ -1.71
COL8A1-204ENST00000462604 PTCH1Q13635 1447 aa4.38□□□□□ -1.71
COL8A1-204ENST00000462604 PPIP5K1Q6PFW1 1433 aa4.38□□□□□ -1.71
COL8A1-204ENST00000462604 NEXMIFQ5QGS0 1516 aa4.37□□□□□ -1.71
COL8A1-204ENST00000462604 K7ELQ4 463 aaPredicted RBP4.37□□□□□ -1.71
COL8A1-204ENST00000462604 FYB1O15117 783 aa4.37□□□□□ -1.71
COL8A1-204ENST00000462604 PRKAR2BP31323 418 aa4.37□□□□□ -1.71
COL8A1-204ENST00000462604 GNAI1P63096 354 aa4.37□□□□□ -1.71
COL8A1-204ENST00000462604 RABEP1Q15276 862 aa4.37□□□□□ -1.71
COL8A1-204ENST00000462604 ANKRD45Q5TZF3 282 aa4.37□□□□□ -1.71
COL8A1-204ENST00000462604 CASC1Q6TDU7 716 aa4.37□□□□□ -1.71
COL8A1-204ENST00000462604 PROM2Q8N271 834 aa4.37□□□□□ -1.71
COL8A1-204ENST00000462604 TNPO1Q92973 898 aaKnown RBP4.37□□□□□ -1.71
COL8A1-204ENST00000462604 PRAM1Q96QH2 718 aa4.37□□□□□ -1.71
COL8A1-204ENST00000462604 IFT57Q9NWB7 429 aa4.37□□□□□ -1.71
COL8A1-204ENST00000462604 ZC3H13Q5T200 1668 aaKnown RBP4.37□□□□□ -1.71
COL8A1-204ENST00000462604 ABCC4O15439 1325 aa4.37□□□□□ -1.71
COL8A1-204ENST00000462604 KIF24Q5T7B8 1368 aa4.37□□□□□ -1.71
COL8A1-204ENST00000462604 FAM135BQ49AJ0 1406 aa4.37□□□□□ -1.71
COL8A1-204ENST00000462604 NEO1Q92859 1461 aa4.37□□□□□ -1.71
COL8A1-204ENST00000462604 CDC42BPGQ6DT37 1551 aa4.36□□□□□ -1.71
COL8A1-204ENST00000462604 ESPNB1AK53 854 aa4.36□□□□□ -1.71
COL8A1-204ENST00000462604 MYCNP04198 464 aaPredicted RBP4.36□□□□□ -1.71
COL8A1-204ENST00000462604 NUTM2DQ5VT03 806 aaPredicted RBP4.36□□□□□ -1.71
COL8A1-204ENST00000462604 TBC1D9Q6ZT07 1266 aa4.36□□□□□ -1.71
COL8A1-204ENST00000462604 MRPL50Q8N5N7 158 aaKnown RBP4.36□□□□□ -1.71
COL8A1-204ENST00000462604 PANK2Q9BZ23 570 aa4.36□□□□□ -1.71
COL8A1-204ENST00000462604 KIF1BO60333 1816 aa4.36□□□□□ -1.71
COL8A1-204ENST00000462604 YTHDC2Q9H6S0 1430 aaKnown RBP4.36□□□□□ -1.71
COL8A1-204ENST00000462604 PTPRMP28827 1452 aa4.36□□□□□ -1.71
COL8A1-204ENST00000462604 ATP7BP35670 1465 aa4.36□□□□□ -1.71
COL8A1-204ENST00000462604 KIDINS220Q9ULH0 1771 aa4.35□□□□□ -1.71
COL8A1-204ENST00000462604 ZBTB7BO15156 539 aaPredicted RBP4.35□□□□□ -1.71
COL8A1-204ENST00000462604 VAMP4O75379 141 aa4.35□□□□□ -1.71
COL8A1-204ENST00000462604 TPM2P07951 284 aa4.35□□□□□ -1.71
COL8A1-204ENST00000462604 NUCB2P80303 420 aa4.35□□□□□ -1.71
COL8A1-204ENST00000462604 CCDC173Q0VFZ6 552 aa4.35□□□□□ -1.71
COL8A1-204ENST00000462604 IDI1Q13907 227 aa4.35□□□□□ -1.71
COL8A1-204ENST00000462604 INTS3Q68E01 1043 aaKnown RBP4.35□□□□□ -1.71
COL8A1-204ENST00000462604 CDK19Q9BWU1 502 aa4.35□□□□□ -1.71
COL8A1-204ENST00000462604 ATF5Q9Y2D1 282 aaPredicted RBP4.35□□□□□ -1.71
COL8A1-204ENST00000462604 IBTKQ9P2D0 1353 aaPredicted RBP4.35□□□□□ -1.71
COL8A1-204ENST00000462604 CD163L1Q9NR16 1453 aa4.35□□□□□ -1.71
COL8A1-204ENST00000462604 ARHGEF40Q8TER5 1519 aa4.35□□□□□ -1.71
COL8A1-204ENST00000462604 LRRC7Q96NW7 1537 aa4.35□□□□□ -1.71
COL8A1-204ENST00000462604 PIK3C2BO00750 1634 aa4.35□□□□□ -1.71
COL8A1-204ENST00000462604 CAMSAP1Q5T5Y3 1602 aa4.35□□□□□ -1.71
COL8A1-204ENST00000462604 PPLO60437 1756 aa4.35□□□□□ -1.71
COL8A1-204ENST00000462604 VIRMAQ69YN4 1812 aaKnown RBP4.35□□□□□ -1.71
COL8A1-204ENST00000462604 RRP9O43818 475 aaKnown RBP4.34□□□□□ -1.71
COL8A1-204ENST00000462604 ST18O60284 1047 aa4.34□□□□□ -1.71
COL8A1-204ENST00000462604 ZNF853P0CG23 659 aa4.34□□□□□ -1.71
COL8A1-204ENST00000462604 SSFA2P28290 1259 aa4.34□□□□□ -1.71
COL8A1-204ENST00000462604 NASPP49321 788 aaPredicted RBP4.34□□□□□ -1.71
COL8A1-204ENST00000462604 KLHL40Q2TBA0 621 aa4.34□□□□□ -1.71
COL8A1-204ENST00000462604 TWISTNBQ3B726 338 aaPredicted RBP4.34□□□□□ -1.71
COL8A1-204ENST00000462604 CLEC17AQ6ZS10 378 aa4.34□□□□□ -1.71
COL8A1-204ENST00000462604 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.34□□□□□ -1.71
COL8A1-204ENST00000462604 C1orf115Q9H7X2 142 aa4.34□□□□□ -1.71
COL8A1-204ENST00000462604 CWC22Q9HCG8 908 aaKnown RBP4.34□□□□□ -1.71
COL8A1-204ENST00000462604 CABP1Q9NZU7 370 aa4.34□□□□□ -1.71
COL8A1-204ENST00000462604 POLKQ9UBT6 870 aa4.34□□□□□ -1.71
COL8A1-204ENST00000462604 STAG3Q9UJ98 1225 aa4.34□□□□□ -1.71
COL8A1-204ENST00000462604 EDC4Q6P2E9 1401 aaKnown RBP4.34□□□□□ -1.71
COL8A1-204ENST00000462604 CDK12Q9NYV4 1490 aaPredicted RBP4.34□□□□□ -1.71
COL8A1-204ENST00000462604 ARHGEF28Q8N1W1 1705 aaKnown RBP4.33□□□□□ -1.72
COL8A1-204ENST00000462604 DIP2CQ9Y2E4 1556 aa4.33□□□□□ -1.72
COL8A1-204ENST00000462604 DLC1Q96QB1 1528 aa4.33□□□□□ -1.72
COL8A1-204ENST00000462604 CPSF1Q10570 1443 aaKnown RBP4.33□□□□□ -1.72
COL8A1-204ENST00000462604 RIMS2Q9UQ26 1411 aa4.33□□□□□ -1.72
COL8A1-204ENST00000462604 AATKQ6ZMQ8 1374 aa4.33□□□□□ -1.72
COL8A1-204ENST00000462604 HMMRO75330 724 aa4.33□□□□□ -1.72
COL8A1-204ENST00000462604 REC8O95072 547 aa4.33□□□□□ -1.72
COL8A1-204ENST00000462604 BAG4O95429 457 aaKnown RBP4.33□□□□□ -1.72
COL8A1-204ENST00000462604 HMOX1P09601 288 aa4.33□□□□□ -1.72
COL8A1-204ENST00000462604 TRHP20396 242 aaPredicted RBP4.33□□□□□ -1.72
COL8A1-204ENST00000462604 IL13P35225 146 aa4.33□□□□□ -1.72
COL8A1-204ENST00000462604 TTC22Q5TAA0 569 aa4.33□□□□□ -1.72
COL8A1-204ENST00000462604 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.33□□□□□ -1.72
COL8A1-204ENST00000462604 ZSCAN30Q86W11 494 aa4.33□□□□□ -1.72
COL8A1-204ENST00000462604 RPAP2Q8IXW5 612 aaPredicted RBP4.33□□□□□ -1.72
COL8A1-204ENST00000462604 PIAS4Q8N2W9 510 aaPredicted RBP4.33□□□□□ -1.72
COL8A1-204ENST00000462604 ANKRD44Q8N8A2 993 aa4.33□□□□□ -1.72
COL8A1-204ENST00000462604 GAS2L2Q8NHY3 880 aa4.33□□□□□ -1.72
COL8A1-204ENST00000462604 COG3Q96JB2 828 aa4.33□□□□□ -1.72
COL8A1-204ENST00000462604 KIF2CQ99661 725 aa4.33□□□□□ -1.72
COL8A1-204ENST00000462604 MBIPQ9NS73 344 aa4.33□□□□□ -1.72
COL8A1-204ENST00000462604 RNF216Q9NWF9 866 aaPredicted RBP4.33□□□□□ -1.72
COL8A1-204ENST00000462604 DDX49Q9Y6V7 483 aaKnown RBP4.33□□□□□ -1.72
COL8A1-204ENST00000462604 CLTCQ00610 1675 aaKnown RBP4.32□□□□□ -1.72
COL8A1-204ENST00000462604 YEATS2Q9ULM3 1422 aa4.32□□□□□ -1.72
COL8A1-204ENST00000462604 PTPRCP08575 1304 aa4.32□□□□□ -1.72
COL8A1-204ENST00000462604 RAPGEF3O95398 923 aa4.32□□□□□ -1.72
COL8A1-204ENST00000462604 CD2BP2O95400 341 aaKnown RBP4.32□□□□□ -1.72
COL8A1-204ENST00000462604 GSPT1P15170 499 aaKnown RBP4.32□□□□□ -1.72
COL8A1-204ENST00000462604 NCLP19338 710 aaKnown RBP4.32□□□□□ -1.72
COL8A1-204ENST00000462604 MCCP23508 829 aa4.32□□□□□ -1.72
COL8A1-204ENST00000462604 MSNP26038 577 aaKnown RBP4.32□□□□□ -1.72
COL8A1-204ENST00000462604 ZNF445P59923 1031 aa4.32□□□□□ -1.72
COL8A1-204ENST00000462604 MAPK8IP2Q13387 824 aaPredicted RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms