RNA–Protein interactions for RNA: ENST00000461841.7

CDH23-208, Transcript of cadherin related 23, human

TSL 5 BASIC

Gene CDH23, Length 2,000 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDH23-208	ENST00000461841	BCAR3	O75815	825 aa		33.1	■■■□□ 2.89
CDH23-208	ENST00000461841	IL16	Q14005	1332 aa		33.1	■■■□□ 2.89
CDH23-208	ENST00000461841	C20orf194	Q5TEA3	1177 aa		33.09	■■■□□ 2.89
CDH23-208	ENST00000461841	CCDC136	Q96JN2	1154 aa		33.09	■■■□□ 2.89
CDH23-208	ENST00000461841	TMEM94	Q12767	1356 aa		33.09	■■■□□ 2.89
CDH23-208	ENST00000461841	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	33.09	■■■□□ 2.89
CDH23-208	ENST00000461841	FOXO3	O43524	673 aa		33.07	■■■□□ 2.89
CDH23-208	ENST00000461841	AMPH	P49418	695 aa		33.07	■■■□□ 2.88
CDH23-208	ENST00000461841	SULT6B1	Q6IMI4	303 aa		33.06	■■■□□ 2.88
CDH23-208	ENST00000461841	AEBP1	Q8IUX7	1158 aa		33.06	■■■□□ 2.88
CDH23-208	ENST00000461841	C1orf167	Q5SNV9	1468 aa		33.06	■■■□□ 2.88
CDH23-208	ENST00000461841	RGPD1	P0DJD0	1748 aa		33.05	■■■□□ 2.88
CDH23-208	ENST00000461841	FANCI	Q9NVI1	1328 aa		33.05	■■■□□ 2.88
CDH23-208	ENST00000461841	CRBN	Q96SW2	442 aa		33.05	■■■□□ 2.88
CDH23-208	ENST00000461841	NCOA3	Q9Y6Q9	1424 aa		33.05	■■■□□ 2.88
CDH23-208	ENST00000461841	TSR2	Q969E8	191 aa	Known RBP	33.04	■■■□□ 2.88
CDH23-208	ENST00000461841	KIF24	Q5T7B8	1368 aa		33.03	■■■□□ 2.88
CDH23-208	ENST00000461841	RARS	P54136	660 aa	Known RBP	33.01	■■■□□ 2.88
CDH23-208	ENST00000461841	STRC	Q7RTU9	1775 aa		33.01	■■■□□ 2.87
CDH23-208	ENST00000461841	ATF3	P18847	181 aa		33.01	■■■□□ 2.87
CDH23-208	ENST00000461841	XPC	Q01831	940 aa	Predicted RBP	32.99	■■■□□ 2.87
CDH23-208	ENST00000461841	DCC	P43146	1447 aa		32.99	■■■□□ 2.87
CDH23-208	ENST00000461841	HOXC9	P31274	260 aa		32.99	■■■□□ 2.87
CDH23-208	ENST00000461841	ARHGEF10	O15013	1369 aa		32.98	■■■□□ 2.87
CDH23-208	ENST00000461841	MST1R	Q04912	1400 aa		32.97	■■■□□ 2.87
CDH23-208	ENST00000461841	CT47B1	P0C2W7	299 aa	Predicted RBP	32.95	■■■□□ 2.87
CDH23-208	ENST00000461841	EXOSC9	Q06265	439 aa	Known RBP	32.95	■■■□□ 2.87
CDH23-208	ENST00000461841	KIF1A	Q12756	1690 aa		32.95	■■■□□ 2.87
CDH23-208	ENST00000461841	DLG5	Q8TDM6	1919 aa		32.95	■■■□□ 2.86
CDH23-208	ENST00000461841	THUMPD2	Q9BTF0	503 aa	Known RBP	32.94	■■■□□ 2.86
CDH23-208	ENST00000461841	KRT28	Q7Z3Y7	464 aa		32.94	■■■□□ 2.86
CDH23-208	ENST00000461841	EYA1	Q99502	592 aa		32.94	■■■□□ 2.86
CDH23-208	ENST00000461841	TSHZ2	Q9NRE2	1034 aa		32.94	■■■□□ 2.86
CDH23-208	ENST00000461841	NFAT5	O94916	1531 aa		32.93	■■■□□ 2.86
CDH23-208	ENST00000461841	CALD1	Q05682	793 aa	Known RBP	32.93	■■■□□ 2.86
CDH23-208	ENST00000461841	LMOD3	Q0VAK6	560 aa		32.93	■■■□□ 2.86
CDH23-208	ENST00000461841	IGSF1	Q8N6C5	1336 aa		32.93	■■■□□ 2.86
CDH23-208	ENST00000461841	KDR	P35968	1356 aa		32.92	■■■□□ 2.86
CDH23-208	ENST00000461841	KCNH5	Q8NCM2	988 aa		32.92	■■■□□ 2.86
CDH23-208	ENST00000461841	CADPS2	Q86UW7	1296 aa		32.91	■■■□□ 2.86
CDH23-208	ENST00000461841	RTL1	A6NKG5	1358 aa		32.91	■■■□□ 2.86
CDH23-208	ENST00000461841	TRPM3	Q9HCF6	1732 aa	Predicted RBP	32.9	■■■□□ 2.86
CDH23-208	ENST00000461841	LTN1	O94822	1766 aa		32.89	■■■□□ 2.86
CDH23-208	ENST00000461841	PDE3A	Q14432	1141 aa		32.89	■■■□□ 2.85
CDH23-208	ENST00000461841	FAM83G	A6ND36	823 aa		32.88	■■■□□ 2.85
CDH23-208	ENST00000461841	BCL2L13	Q9BXK5	485 aa		32.87	■■■□□ 2.85
CDH23-208	ENST00000461841	MSH6	P52701	1360 aa		32.87	■■■□□ 2.85
CDH23-208	ENST00000461841	IP6K1	Q92551	441 aa		32.87	■■■□□ 2.85
CDH23-208	ENST00000461841	IFT57	Q9NWB7	429 aa		32.87	■■■□□ 2.85
CDH23-208	ENST00000461841	LAS1L	Q9Y4W2	734 aa	Known RBP	32.87	■■■□□ 2.85
CDH23-208	ENST00000461841	ZNF853	P0CG23	659 aa		32.86	■■■□□ 2.85
CDH23-208	ENST00000461841	FRAT1	Q92837	279 aa	Predicted RBP	32.86	■■■□□ 2.85
CDH23-208	ENST00000461841	LMOD2	Q6P5Q4	547 aa		32.85	■■■□□ 2.85
CDH23-208	ENST00000461841	GC	P02774	474 aa		32.85	■■■□□ 2.85
CDH23-208	ENST00000461841	CANX	P27824	592 aa	Known RBP	32.85	■■■□□ 2.85
CDH23-208	ENST00000461841	GNAI1	P63096	354 aa		32.85	■■■□□ 2.85
CDH23-208	ENST00000461841	XIRP1	Q702N8	1843 aa	Known RBP	32.85	■■■□□ 2.85
CDH23-208	ENST00000461841	DCTN1	Q14203	1278 aa		32.84	■■■□□ 2.85
CDH23-208	ENST00000461841	SLIT3	O75094	1523 aa		32.83	■■■□□ 2.85
CDH23-208	ENST00000461841	LTV1	Q96GA3	475 aa	Predicted RBP	32.82	■■■□□ 2.84
CDH23-208	ENST00000461841	USP19	O94966	1318 aa		32.82	■■■□□ 2.84
CDH23-208	ENST00000461841	CFAP44	Q96MT7	982 aa		32.82	■■■□□ 2.84
CDH23-208	ENST00000461841	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	32.81	■■■□□ 2.84
CDH23-208	ENST00000461841	DDX17	Q92841	729 aa	Known RBP	32.8	■■■□□ 2.84
CDH23-208	ENST00000461841	PHRF1	Q9P1Y6	1649 aa	Known RBP	32.79	■■■□□ 2.84
CDH23-208	ENST00000461841	MTHFSD	Q2M296	383 aa	Known RBP	32.79	■■■□□ 2.84
CDH23-208	ENST00000461841	MBIP	Q9NS73	344 aa		32.79	■■■□□ 2.84
CDH23-208	ENST00000461841	ARHGEF25	Q86VW2	580 aa		32.78	■■■□□ 2.84
CDH23-208	ENST00000461841	PANK1	Q8TE04	598 aa		32.78	■■■□□ 2.84
CDH23-208	ENST00000461841	SSH1	Q8WYL5	1049 aa		32.78	■■■□□ 2.84
CDH23-208	ENST00000461841	ALS2	Q96Q42	1657 aa		32.77	■■■□□ 2.84
CDH23-208	ENST00000461841	PLEKHG5	O94827	1062 aa		32.77	■■■□□ 2.84
CDH23-208	ENST00000461841	SMC4	Q9NTJ3	1288 aa		32.77	■■■□□ 2.84
CDH23-208	ENST00000461841	MCM10	Q7L590	875 aa		32.75	■■■□□ 2.83
CDH23-208	ENST00000461841	NPHP3	Q7Z494	1330 aa		32.75	■■■□□ 2.83
CDH23-208	ENST00000461841	ZBTB7C	A1YPR0	619 aa		32.75	■■■□□ 2.83
CDH23-208	ENST00000461841	TNN	Q9UQP3	1299 aa		32.73	■■■□□ 2.83
CDH23-208	ENST00000461841	COG6	Q9Y2V7	657 aa		32.73	■■■□□ 2.83
CDH23-208	ENST00000461841	RLBP1	P12271	317 aa		32.72	■■■□□ 2.83
CDH23-208	ENST00000461841	GAS2L2	Q8NHY3	880 aa		32.72	■■■□□ 2.83
CDH23-208	ENST00000461841	ZNF428	Q96B54	188 aa		32.72	■■■□□ 2.83
CDH23-208	ENST00000461841	VAMP4	O75379	141 aa		32.71	■■■□□ 2.83
CDH23-208	ENST00000461841	ALDH1L2	Q3SY69	923 aa		32.71	■■■□□ 2.83
CDH23-208	ENST00000461841	ZKSCAN2	Q63HK3	967 aa		32.71	■■■□□ 2.83
CDH23-208	ENST00000461841	NBPF6	Q5VWK0	638 aa		32.7	■■■□□ 2.83
CDH23-208	ENST00000461841	NBPF4	Q96M43	638 aa		32.7	■■■□□ 2.83
CDH23-208	ENST00000461841	USHBP1	Q8N6Y0	703 aa		32.7	■■■□□ 2.82
CDH23-208	ENST00000461841	TSPYL6	Q8N831	410 aa		32.7	■■■□□ 2.82
CDH23-208	ENST00000461841	MED1	Q15648	1581 aa	Predicted RBP	32.69	■■■□□ 2.82
CDH23-208	ENST00000461841	CHL1	O00533	1208 aa		32.68	■■■□□ 2.82
CDH23-208	ENST00000461841	CLUAP1	Q96AJ1	413 aa		32.68	■■■□□ 2.82
CDH23-208	ENST00000461841	PXDN	Q92626	1479 aa		32.67	■■■□□ 2.82
CDH23-208	ENST00000461841	BRINP3	Q76B58	766 aa		32.67	■■■□□ 2.82
CDH23-208	ENST00000461841	CRB1	P82279	1406 aa		32.67	■■■□□ 2.82
CDH23-208	ENST00000461841	RTF1	Q92541	710 aa	Known RBP	32.67	■■■□□ 2.82
CDH23-208	ENST00000461841	C8orf58	Q8NAV2	365 aa		32.66	■■■□□ 2.82
CDH23-208	ENST00000461841	KDM2B	Q8NHM5	1336 aa		32.65	■■■□□ 2.82
CDH23-208	ENST00000461841	NOB1	Q9ULX3	412 aa	Known RBP	32.65	■■■□□ 2.82
CDH23-208	ENST00000461841	ELL2	O00472	640 aa	Predicted RBP	32.64	■■■□□ 2.82
CDH23-208	ENST00000461841	TWISTNB	Q3B726	338 aa	Predicted RBP	32.64	■■■□□ 2.82

Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms