RNA–Protein interactions for RNA: ENST00000461159.6

HDAC9-219, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,557 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-219ENST00000461159 NINLQ9Y2I6 1382 aa10.87□□□□□ -0.67
HDAC9-219ENST00000461159 CPSF1Q10570 1443 aaKnown RBP10.86□□□□□ -0.67
HDAC9-219ENST00000461159 BACH2Q9BYV9 841 aa10.86□□□□□ -0.67
HDAC9-219ENST00000461159 CCDC9Q9Y3X0 531 aaKnown RBP10.86□□□□□ -0.67
HDAC9-219ENST00000461159 PLEKHG3A1L390 1219 aa10.85□□□□□ -0.67
HDAC9-219ENST00000461159 WDR43Q15061 677 aaKnown RBP eCLIP10.85□□□□□ -0.67
HDAC9-219ENST00000461159 LMOD2Q6P5Q4 547 aa10.85□□□□□ -0.67
HDAC9-219ENST00000461159 EMILIN1Q9Y6C2 1016 aa10.85□□□□□ -0.67
HDAC9-219ENST00000461159 NALCNQ8IZF0 1738 aa10.85□□□□□ -0.67
HDAC9-219ENST00000461159 TTC21BQ7Z4L5 1316 aa10.85□□□□□ -0.67
HDAC9-219ENST00000461159 ADRA2BP18089 450 aa10.85□□□□□ -0.67
HDAC9-219ENST00000461159 TICAM2Q86XR7 235 aa10.85□□□□□ -0.67
HDAC9-219ENST00000461159 DDRGK1Q96HY6 314 aa10.85□□□□□ -0.67
HDAC9-219ENST00000461159 STRCQ7RTU9 1775 aa10.85□□□□□ -0.67
HDAC9-219ENST00000461159 STRCP1A6NGW2 1772 aa10.84□□□□□ -0.67
HDAC9-219ENST00000461159 PHF8Q9UPP1 1060 aa10.84□□□□□ -0.67
HDAC9-219ENST00000461159 ZNF692Q9BU19 519 aaPredicted RBP10.84□□□□□ -0.67
HDAC9-219ENST00000461159 C19orf44Q9H6X5 657 aa10.84□□□□□ -0.67
HDAC9-219ENST00000461159 ADGRB2O60241 1585 aa10.84□□□□□ -0.67
HDAC9-219ENST00000461159 COG3Q96JB2 828 aa10.83□□□□□ -0.68
HDAC9-219ENST00000461159 ADGRL3Q9HAR2 1447 aa10.83□□□□□ -0.68
HDAC9-219ENST00000461159 GSE1Q14687 1217 aa10.83□□□□□ -0.68
HDAC9-219ENST00000461159 TMEM132AQ24JP5 1023 aa10.83□□□□□ -0.68
HDAC9-219ENST00000461159 LAS1LQ9Y4W2 734 aaKnown RBP10.83□□□□□ -0.68
HDAC9-219ENST00000461159 U2SURPO15042 1029 aaKnown RBP10.82□□□□□ -0.68
HDAC9-219ENST00000461159 ATF3P18847 181 aa10.82□□□□□ -0.68
HDAC9-219ENST00000461159 PSME1Q06323 249 aa10.82□□□□□ -0.68
HDAC9-219ENST00000461159 NEUROD2Q15784 382 aa10.82□□□□□ -0.68
HDAC9-219ENST00000461159 CDCA7LQ96GN5 454 aa10.82□□□□□ -0.68
HDAC9-219ENST00000461159 EDC4Q6P2E9 1401 aaKnown RBP10.82□□□□□ -0.68
HDAC9-219ENST00000461159 CDC42BPGQ6DT37 1551 aa10.82□□□□□ -0.68
HDAC9-219ENST00000461159 NLRP6P59044 892 aa10.82□□□□□ -0.68
HDAC9-219ENST00000461159 ABTB2Q8N961 1025 aa10.82□□□□□ -0.68
HDAC9-219ENST00000461159 POLKQ9UBT6 870 aa10.82□□□□□ -0.68
HDAC9-219ENST00000461159 USP6P35125 1406 aa10.82□□□□□ -0.68
HDAC9-219ENST00000461159 BLMP54132 1417 aaPredicted RBP10.81□□□□□ -0.68
HDAC9-219ENST00000461159 ZBTB7CA1YPR0 619 aa10.81□□□□□ -0.68
HDAC9-219ENST00000461159 ARID3AQ99856 593 aa10.81□□□□□ -0.68
HDAC9-219ENST00000461159 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.81□□□□□ -0.68
HDAC9-219ENST00000461159 POLR3AO14802 1390 aaPredicted RBP10.81□□□□□ -0.68
HDAC9-219ENST00000461159 NSD2O96028 1365 aa10.81□□□□□ -0.68
HDAC9-219ENST00000461159 TOPAZ1Q8N9V7 1692 aa10.81□□□□□ -0.68
HDAC9-219ENST00000461159 U2AF1L5P0DN76 240 aaPredicted RBP10.8□□□□□ -0.68
HDAC9-219ENST00000461159 U2AF1Q01081 240 aaKnown RBP eCLIP10.8□□□□□ -0.68
HDAC9-219ENST00000461159 RRP7AQ9Y3A4 280 aaKnown RBP10.8□□□□□ -0.68
HDAC9-219ENST00000461159 AKAP12Q02952 1782 aa10.8□□□□□ -0.68
HDAC9-219ENST00000461159 KIF20BQ96Q89 1820 aa10.8□□□□□ -0.68
HDAC9-219ENST00000461159 ZNF830Q96NB3 372 aaPredicted RBP10.8□□□□□ -0.68
HDAC9-219ENST00000461159 SHPRHQ149N8 1683 aa10.8□□□□□ -0.68
HDAC9-219ENST00000461159 MON2Q7Z3U7 1717 aa10.8□□□□□ -0.68
HDAC9-219ENST00000461159 APAF1O14727 1248 aa10.79□□□□□ -0.68
HDAC9-219ENST00000461159 KCNG1Q9UIX4 513 aa10.79□□□□□ -0.68
HDAC9-219ENST00000461159 RGS22Q8NE09 1264 aa10.79□□□□□ -0.68
HDAC9-219ENST00000461159 TMEM51Q9NW97 253 aa10.79□□□□□ -0.68
HDAC9-219ENST00000461159 ITSN1Q15811 1721 aa10.79□□□□□ -0.68
HDAC9-219ENST00000461159 GRIPAP1Q4V328 841 aa10.78□□□□□ -0.68
HDAC9-219ENST00000461159 WWC1Q8IX03 1113 aa10.78□□□□□ -0.68
HDAC9-219ENST00000461159 MAP2P11137 1827 aaKnown RBP10.78□□□□□ -0.68
HDAC9-219ENST00000461159 FMN2Q9NZ56 1722 aa10.78□□□□□ -0.68
HDAC9-219ENST00000461159 ANKRD26Q9UPS8 1709 aa10.78□□□□□ -0.68
HDAC9-219ENST00000461159 CFAP53Q96M91 514 aa10.78□□□□□ -0.68
HDAC9-219ENST00000461159 HMOX1P09601 288 aa10.77□□□□□ -0.68
HDAC9-219ENST00000461159 DMRT2Q9Y5R5 561 aa10.77□□□□□ -0.68
HDAC9-219ENST00000461159 NWD1Q149M9 1564 aa10.77□□□□□ -0.69
HDAC9-219ENST00000461159 HSP90AB2PQ58FF8 381 aa10.77□□□□□ -0.69
HDAC9-219ENST00000461159 SMAP1Q8IYB5 467 aaPredicted RBP10.77□□□□□ -0.69
HDAC9-219ENST00000461159 SSH2Q76I76 1423 aa10.77□□□□□ -0.69
HDAC9-219ENST00000461159 ANKARQ7Z5J8 1434 aa10.77□□□□□ -0.69
HDAC9-219ENST00000461159 MSH6P52701 1360 aa10.76□□□□□ -0.69
HDAC9-219ENST00000461159 C1orf167Q5SNV9 1468 aa10.76□□□□□ -0.69
HDAC9-219ENST00000461159 CLGNO14967 610 aa10.76□□□□□ -0.69
HDAC9-219ENST00000461159 KRT28Q7Z3Y7 464 aa10.76□□□□□ -0.69
HDAC9-219ENST00000461159 SPINK5Q9NQ38 1064 aaPredicted RBP10.76□□□□□ -0.69
HDAC9-219ENST00000461159 NRKQ7Z2Y5 1582 aa10.76□□□□□ -0.69
HDAC9-219ENST00000461159 COL3A1P02461 1466 aaPredicted RBP10.76□□□□□ -0.69
HDAC9-219ENST00000461159 DIAPH1O60610 1272 aaKnown RBP10.75□□□□□ -0.69
HDAC9-219ENST00000461159 PTMAP06454 111 aaKnown RBP10.75□□□□□ -0.69
HDAC9-219ENST00000461159 CADPS2Q86UW7 1296 aa10.75□□□□□ -0.69
HDAC9-219ENST00000461159 CLSTN1O94985 981 aa10.75□□□□□ -0.69
HDAC9-219ENST00000461159 MMP14P50281 582 aa10.75□□□□□ -0.69
HDAC9-219ENST00000461159 CABLES1Q8TDN4 633 aa10.75□□□□□ -0.69
HDAC9-219ENST00000461159 LTV1Q96GA3 475 aaPredicted RBP10.75□□□□□ -0.69
HDAC9-219ENST00000461159 PLCD3Q8N3E9 789 aa10.74□□□□□ -0.69
HDAC9-219ENST00000461159 CRBNQ96SW2 442 aa10.74□□□□□ -0.69
HDAC9-219ENST00000461159 PRDM10Q9NQV6 1147 aa10.74□□□□□ -0.69
HDAC9-219ENST00000461159 MAP3K19Q56UN5 1328 aa10.74□□□□□ -0.69
HDAC9-219ENST00000461159 LRRC7Q96NW7 1537 aa10.74□□□□□ -0.69
HDAC9-219ENST00000461159 ANP32BQ92688 251 aaKnown RBP10.74□□□□□ -0.69
HDAC9-219ENST00000461159 MST1RQ04912 1400 aa10.74□□□□□ -0.69
HDAC9-219ENST00000461159 IGSF3O75054 1194 aa10.73□□□□□ -0.69
HDAC9-219ENST00000461159 UTP14CQ5TAP6 766 aaKnown RBP10.73□□□□□ -0.69
HDAC9-219ENST00000461159 SLAIN2Q9P270 581 aa10.73□□□□□ -0.69
HDAC9-219ENST00000461159 OVOS2A0A0J9YW53 1432 aa10.73□□□□□ -0.69
HDAC9-219ENST00000461159 OVOS2Q6IE36 1432 aa10.73□□□□□ -0.69
HDAC9-219ENST00000461159 PNPLA6Q8IY17 1366 aa10.73□□□□□ -0.69
HDAC9-219ENST00000461159 TTC21AQ8NDW8 1320 aa10.73□□□□□ -0.69
HDAC9-219ENST00000461159 ZNF521Q96K83 1311 aa10.73□□□□□ -0.69
HDAC9-219ENST00000461159 AMPHP49418 695 aa10.73□□□□□ -0.69
HDAC9-219ENST00000461159 TCP11L2Q8N4U5 519 aa10.73□□□□□ -0.69
HDAC9-219ENST00000461159 PNNQ9H307 717 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms