RNA–Protein interactions for RNA: ENST00000460838.5

CCDC66-210, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 744 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-210ENST00000460838 ATAD2Q6PL18 1390 aa13.32□□□□□ -0.28
CCDC66-210ENST00000460838 PLEKHG3A1L390 1219 aa13.31□□□□□ -0.28
CCDC66-210ENST00000460838 XPCQ01831 940 aaPredicted RBP13.31□□□□□ -0.28
CCDC66-210ENST00000460838 PUS7Q96PZ0 661 aaKnown RBP13.3□□□□□ -0.28
CCDC66-210ENST00000460838 RYDENQ9NUL5 291 aaKnown RBP13.3□□□□□ -0.28
CCDC66-210ENST00000460838 SHPRHQ149N8 1683 aa13.3□□□□□ -0.28
CCDC66-210ENST00000460838 CD163L1Q9NR16 1453 aa13.29□□□□□ -0.28
CCDC66-210ENST00000460838 MYOM1P52179 1685 aa13.29□□□□□ -0.28
CCDC66-210ENST00000460838 SLC24A1O60721 1099 aa13.29□□□□□ -0.28
CCDC66-210ENST00000460838 TMF1P82094 1093 aa13.29□□□□□ -0.28
CCDC66-210ENST00000460838 NKX1-1Q15270 411 aaPredicted RBP13.29□□□□□ -0.28
CCDC66-210ENST00000460838 OCEL1Q9H607 264 aa13.29□□□□□ -0.28
CCDC66-210ENST00000460838 CABP1Q9NZU7 370 aa13.29□□□□□ -0.28
CCDC66-210ENST00000460838 ACEP12821 1306 aa13.29□□□□□ -0.28
CCDC66-210ENST00000460838 AKAP12Q02952 1782 aa13.28□□□□□ -0.28
CCDC66-210ENST00000460838 PNPLA6Q8IY17 1366 aa13.28□□□□□ -0.28
CCDC66-210ENST00000460838 JCADQ9P266 1359 aa13.28□□□□□ -0.28
CCDC66-210ENST00000460838 CPSF1Q10570 1443 aaKnown RBP13.28□□□□□ -0.28
CCDC66-210ENST00000460838 COL22A1Q8NFW1 1626 aaPredicted RBP13.28□□□□□ -0.28
CCDC66-210ENST00000460838 ALS2Q96Q42 1657 aa13.28□□□□□ -0.28
CCDC66-210ENST00000460838 KRT28Q7Z3Y7 464 aa13.27□□□□□ -0.29
CCDC66-210ENST00000460838 NGDNQ8NEJ9 315 aaKnown RBP13.27□□□□□ -0.29
CCDC66-210ENST00000460838 MFRPQ9BY79 579 aa13.27□□□□□ -0.29
CCDC66-210ENST00000460838 SBNO1A3KN83 1393 aa13.27□□□□□ -0.29
CCDC66-210ENST00000460838 TNS3Q68CZ2 1445 aa13.27□□□□□ -0.29
CCDC66-210ENST00000460838 NRKQ7Z2Y5 1582 aa13.27□□□□□ -0.29
CCDC66-210ENST00000460838 C11orf95C9JLR9 678 aaPredicted RBP13.26□□□□□ -0.29
CCDC66-210ENST00000460838 USP6P35125 1406 aa13.26□□□□□ -0.29
CCDC66-210ENST00000460838 PSME1Q06323 249 aa13.26□□□□□ -0.29
CCDC66-210ENST00000460838 SPATA31A3Q5VYP0 1347 aa13.26□□□□□ -0.29
CCDC66-210ENST00000460838 SSH2Q76I76 1423 aa13.26□□□□□ -0.29
CCDC66-210ENST00000460838 MON2Q7Z3U7 1717 aa13.26□□□□□ -0.29
CCDC66-210ENST00000460838 LRRC59Q96AG4 307 aaKnown RBP13.26□□□□□ -0.29
CCDC66-210ENST00000460838 CFAP44Q96MT7 982 aa13.26□□□□□ -0.29
CCDC66-210ENST00000460838 NINLQ9Y2I6 1382 aa13.25□□□□□ -0.29
CCDC66-210ENST00000460838 ZEB1P37275 1124 aaPredicted RBP13.25□□□□□ -0.29
CCDC66-210ENST00000460838 IRX5P78411 483 aaPredicted RBP13.25□□□□□ -0.29
CCDC66-210ENST00000460838 PAXIP1Q6ZW49 1069 aaPredicted RBP13.25□□□□□ -0.29
CCDC66-210ENST00000460838 SPRYD3Q8NCJ5 442 aa13.25□□□□□ -0.29
CCDC66-210ENST00000460838 A0A1W2PP64 1363 aa13.24□□□□□ -0.29
CCDC66-210ENST00000460838 SLC12A5Q9H2X9 1139 aa13.24□□□□□ -0.29
CCDC66-210ENST00000460838 LRP6O75581 1613 aa13.24□□□□□ -0.29
CCDC66-210ENST00000460838 CDCA8Q53HL2 280 aa13.23□□□□□ -0.29
CCDC66-210ENST00000460838 TMC1Q8TDI8 760 aa13.23□□□□□ -0.29
CCDC66-210ENST00000460838 MED1Q15648 1581 aaPredicted RBP13.23□□□□□ -0.29
CCDC66-210ENST00000460838 ABCA3Q99758 1704 aa13.22□□□□□ -0.29
CCDC66-210ENST00000460838 CRYBG1Q9Y4K1 1723 aa13.22□□□□□ -0.29
CCDC66-210ENST00000460838 COLQQ9Y215 455 aaPredicted RBP13.22□□□□□ -0.29
CCDC66-210ENST00000460838 PIK3C2AO00443 1686 aa13.21□□□□□ -0.29
CCDC66-210ENST00000460838 ARHGEF10O15013 1369 aa13.21□□□□□ -0.29
CCDC66-210ENST00000460838 BRD4O60885 1362 aaPredicted RBP13.21□□□□□ -0.29
CCDC66-210ENST00000460838 KTN1Q86UP2 1357 aaKnown RBP13.21□□□□□ -0.29
CCDC66-210ENST00000460838 KIF7Q2M1P5 1343 aa13.21□□□□□ -0.29
CCDC66-210ENST00000460838 SPATA31A6Q5VVP1 1343 aa13.21□□□□□ -0.29
CCDC66-210ENST00000460838 G3V3G9 751 aa13.21□□□□□ -0.29
CCDC66-210ENST00000460838 ANKRD36BQ8N2N9 1353 aa13.2□□□□□ -0.3
CCDC66-210ENST00000460838 FBXO22Q8NEZ5 403 aa13.2□□□□□ -0.3
CCDC66-210ENST00000460838 MARF1Q9Y4F3 1742 aaKnown RBP13.19□□□□□ -0.3
CCDC66-210ENST00000460838 TERF2IPQ9NYB0 399 aa13.19□□□□□ -0.3
CCDC66-210ENST00000460838 EDC4Q6P2E9 1401 aaKnown RBP13.19□□□□□ -0.3
CCDC66-210ENST00000460838 WASHC2AQ641Q2 1341 aa13.18□□□□□ -0.3
CCDC66-210ENST00000460838 TTC21BQ7Z4L5 1316 aa13.18□□□□□ -0.3
CCDC66-210ENST00000460838 PHRF1Q9P1Y6 1649 aaKnown RBP13.18□□□□□ -0.3
CCDC66-210ENST00000460838 GTPBP6O43824 516 aaPredicted RBP13.18□□□□□ -0.3
CCDC66-210ENST00000460838 HDGFL2Q7Z4V5 671 aaPredicted RBP13.18□□□□□ -0.3
CCDC66-210ENST00000460838 CCDC7Q96M83 1385 aa13.18□□□□□ -0.3
CCDC66-210ENST00000460838 USP54Q70EL1 1684 aa13.18□□□□□ -0.3
CCDC66-210ENST00000460838 DPY19L2Q6NUT2 758 aa13.17□□□□□ -0.3
CCDC66-210ENST00000460838 LMOD2Q6P5Q4 547 aa13.17□□□□□ -0.3
CCDC66-210ENST00000460838 PDCD7Q8N8D1 485 aaKnown RBP13.17□□□□□ -0.3
CCDC66-210ENST00000460838 CABLES1Q8TDN4 633 aa13.17□□□□□ -0.3
CCDC66-210ENST00000460838 POLR3GLQ9BT43 218 aa13.17□□□□□ -0.3
CCDC66-210ENST00000460838 TTC21AQ8NDW8 1320 aa13.16□□□□□ -0.3
CCDC66-210ENST00000460838 L3MBTL3Q96JM7 780 aaPredicted RBP13.16□□□□□ -0.3
CCDC66-210ENST00000460838 MS4A4AQ96JQ5 239 aa13.16□□□□□ -0.3
CCDC66-210ENST00000460838 CARD14Q9BXL6 1004 aa13.16□□□□□ -0.3
CCDC66-210ENST00000460838 USP19O94966 1318 aa13.15□□□□□ -0.3
CCDC66-210ENST00000460838 SLIT3O75094 1523 aa13.15□□□□□ -0.3
CCDC66-210ENST00000460838 NUTM2BA6NNL0 878 aaPredicted RBP13.15□□□□□ -0.3
CCDC66-210ENST00000460838 NUTM2EB1AL46 878 aaPredicted RBP13.15□□□□□ -0.3
CCDC66-210ENST00000460838 NUTM2GQ5VZR2 741 aa13.15□□□□□ -0.3
CCDC66-210ENST00000460838 NUTM2AQ8IVF1 878 aaPredicted RBP13.15□□□□□ -0.3
CCDC66-210ENST00000460838 ABTB2Q8N961 1025 aa13.15□□□□□ -0.3
CCDC66-210ENST00000460838 POTEFA5A3E0 1075 aa13.14□□□□□ -0.31
CCDC66-210ENST00000460838 NME9Q86XW9 330 aa13.14□□□□□ -0.31
CCDC66-210ENST00000460838 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.14□□□□□ -0.31
CCDC66-210ENST00000460838 OVOS2A0A0J9YW53 1432 aa13.13□□□□□ -0.31
CCDC66-210ENST00000460838 OVOS2Q6IE36 1432 aa13.13□□□□□ -0.31
CCDC66-210ENST00000460838 NSD3Q9BZ95 1437 aa13.13□□□□□ -0.31
CCDC66-210ENST00000460838 USP31Q70CQ4 1352 aa13.13□□□□□ -0.31
CCDC66-210ENST00000460838 KIF20BQ96Q89 1820 aa13.12□□□□□ -0.31
CCDC66-210ENST00000460838 ADAMTS2O95450 1211 aa13.12□□□□□ -0.31
CCDC66-210ENST00000460838 PLCB2Q00722 1185 aa13.11□□□□□ -0.31
CCDC66-210ENST00000460838 NLRP13Q86W25 1043 aa13.11□□□□□ -0.31
CCDC66-210ENST00000460838 PANK3Q9H999 370 aa13.11□□□□□ -0.31
CCDC66-210ENST00000460838 BOLA1Q9Y3E2 137 aa13.11□□□□□ -0.31
CCDC66-210ENST00000460838 NFAT5O94916 1531 aa13.11□□□□□ -0.31
CCDC66-210ENST00000460838 PPP1R37O75864 691 aa13.1□□□□□ -0.31
CCDC66-210ENST00000460838 PLCH1Q4KWH8 1693 aa13.09□□□□□ -0.31
CCDC66-210ENST00000460838 FYB1O15117 783 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms