RNA–Protein interactions for RNA: ENST00000460731.5

PTPN12-209, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2

Gene PTPN12, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-209ENST00000460731 PCDHGC3Q9UN70 934 aa8.93□□□□□ -0.98
PTPN12-209ENST00000460731 FYCO1Q9BQS8 1478 aa8.93□□□□□ -0.98
PTPN12-209ENST00000460731 RAPGEF6Q8TEU7 1601 aa8.93□□□□□ -0.98
PTPN12-209ENST00000460731 MAP3K1Q13233 1512 aa8.91□□□□□ -0.98
PTPN12-209ENST00000460731 CCNYL3P0C7X3 344 aa8.91□□□□□ -0.98
PTPN12-209ENST00000460731 VSIG8P0DPA2 414 aa8.91□□□□□ -0.98
PTPN12-209ENST00000460731 GPCPD1Q9NPB8 672 aa8.91□□□□□ -0.98
PTPN12-209ENST00000460731 MAPKBP1O60336 1514 aa8.9□□□□□ -0.98
PTPN12-209ENST00000460731 EPRSP07814 1512 aaKnown RBP8.9□□□□□ -0.98
PTPN12-209ENST00000460731 EVA1BQ9NVM1 165 aa8.9□□□□□ -0.98
PTPN12-209ENST00000460731 MS4A1P11836 297 aa8.89□□□□□ -0.99
PTPN12-209ENST00000460731 CLCN1P35523 988 aa8.89□□□□□ -0.99
PTPN12-209ENST00000460731 PTPRNQ16849 979 aa8.89□□□□□ -0.99
PTPN12-209ENST00000460731 CCDC102AQ96A19 550 aa8.89□□□□□ -0.99
PTPN12-209ENST00000460731 HECW1Q76N89 1606 aa8.88□□□□□ -0.99
PTPN12-209ENST00000460731 TTBK1Q5TCY1 1321 aaPredicted RBP8.88□□□□□ -0.99
PTPN12-209ENST00000460731 PCF11O94913 1555 aaKnown RBP8.88□□□□□ -0.99
PTPN12-209ENST00000460731 FDX1P10109 184 aa8.88□□□□□ -0.99
PTPN12-209ENST00000460731 KLF16Q9BXK1 252 aaPredicted RBP8.88□□□□□ -0.99
PTPN12-209ENST00000460731 UNC93B1Q9H1C4 597 aa8.88□□□□□ -0.99
PTPN12-209ENST00000460731 CCDC18Q5T9S5 1454 aa8.88□□□□□ -0.99
PTPN12-209ENST00000460731 MRPL14Q6P1L8 145 aaKnown RBP8.87□□□□□ -0.99
PTPN12-209ENST00000460731 BAP1Q92560 729 aa8.87□□□□□ -0.99
PTPN12-209ENST00000460731 TLL2Q9Y6L7 1015 aa8.87□□□□□ -0.99
PTPN12-209ENST00000460731 ASXL2Q76L83 1435 aa8.87□□□□□ -0.99
PTPN12-209ENST00000460731 ZCCHC11Q5TAX3 1644 aaKnown RBP8.87□□□□□ -0.99
PTPN12-209ENST00000460731 PLEKHD1A6NEE1 506 aa8.86□□□□□ -0.99
PTPN12-209ENST00000460731 TIMP2P16035 220 aa8.86□□□□□ -0.99
PTPN12-209ENST00000460731 VARSP26640 1264 aaKnown RBP8.86□□□□□ -0.99
PTPN12-209ENST00000460731 NUTM1Q86Y26 1132 aa8.86□□□□□ -0.99
PTPN12-209ENST00000460731 ZNF511Q8NB15 262 aa8.86□□□□□ -0.99
PTPN12-209ENST00000460731 CDK11AQ9UQ88 783 aaPredicted RBP8.86□□□□□ -0.99
PTPN12-209ENST00000460731 LRRIQ1Q96JM4 1722 aa8.85□□□□□ -0.99
PTPN12-209ENST00000460731 PLEKHG3A1L390 1219 aa8.85□□□□□ -0.99
PTPN12-209ENST00000460731 C6orf229H3BNL8 230 aa8.85□□□□□ -0.99
PTPN12-209ENST00000460731 PLCB2Q00722 1185 aa8.85□□□□□ -0.99
PTPN12-209ENST00000460731 KCNH2Q12809 1159 aa8.85□□□□□ -0.99
PTPN12-209ENST00000460731 NNTQ13423 1086 aa8.85□□□□□ -0.99
PTPN12-209ENST00000460731 CDK13Q14004 1512 aaKnown RBP8.85□□□□□ -0.99
PTPN12-209ENST00000460731 ABCC10Q5T3U5 1492 aa8.84□□□□□ -0.99
PTPN12-209ENST00000460731 WDR7Q9Y4E6 1490 aa8.84□□□□□ -0.99
PTPN12-209ENST00000460731 TROQ12816 1431 aaPredicted RBP8.84□□□□□ -0.99
PTPN12-209ENST00000460731 LINC01559Q495D7 138 aa8.84□□□□□ -0.99
PTPN12-209ENST00000460731 DESI1Q6ICB0 168 aa8.84□□□□□ -0.99
PTPN12-209ENST00000460731 GLI2P10070 1586 aa8.83□□□□□ -1
PTPN12-209ENST00000460731 GSK3AP49840 483 aa8.83□□□□□ -1
PTPN12-209ENST00000460731 MAGI3Q5TCQ9 1506 aa8.83□□□□□ -1
PTPN12-209ENST00000460731 TIAM1Q13009 1591 aa8.82□□□□□ -1
PTPN12-209ENST00000460731 ADH1CP00326 375 aa8.82□□□□□ -1
PTPN12-209ENST00000460731 KANK4Q5T7N3 995 aaPredicted RBP8.82□□□□□ -1
PTPN12-209ENST00000460731 SPIRE2Q8WWL2 714 aa8.82□□□□□ -1
PTPN12-209ENST00000460731 PURBQ96QR8 312 aaKnown RBP8.82□□□□□ -1
PTPN12-209ENST00000460731 WDR4P57081 412 aaKnown RBP8.81□□□□□ -1
PTPN12-209ENST00000460731 SCARF1Q14162 830 aa8.81□□□□□ -1
PTPN12-209ENST00000460731 ATP1B4Q9UN42 357 aaPredicted RBP8.81□□□□□ -1
PTPN12-209ENST00000460731 LRRC9Q6ZRR7 1453 aa8.81□□□□□ -1
PTPN12-209ENST00000460731 ARID3CA6NKF2 412 aa8.8□□□□□ -1
PTPN12-209ENST00000460731 SOBPA7XYQ1 873 aa8.8□□□□□ -1
PTPN12-209ENST00000460731 PRR7Q8TB68 274 aa8.8□□□□□ -1
PTPN12-209ENST00000460731 CDK15Q96Q40 435 aa8.8□□□□□ -1
PTPN12-209ENST00000460731 CFAP43Q8NDM7 1665 aa8.79□□□□□ -1
PTPN12-209ENST00000460731 NDUFV2P19404 249 aa8.79□□□□□ -1
PTPN12-209ENST00000460731 KCNMA1Q12791 1236 aa8.79□□□□□ -1
PTPN12-209ENST00000460731 DIP2BQ9P265 1576 aa8.78□□□□□ -1
PTPN12-209ENST00000460731 MTUS2Q5JR59 1369 aa8.78□□□□□ -1
PTPN12-209ENST00000460731 MOXD2PA6NHM9 499 aa8.78□□□□□ -1
PTPN12-209ENST00000460731 SPDYE5A6NIY4 337 aa8.78□□□□□ -1
PTPN12-209ENST00000460731 SUZ12Q15022 739 aaKnown RBP8.78□□□□□ -1
PTPN12-209ENST00000460731 KDM2AQ9Y2K7 1162 aa8.78□□□□□ -1
PTPN12-209ENST00000460731 ABCA9Q8IUA7 1624 aa8.78□□□□□ -1
PTPN12-209ENST00000460731 EHBP1L1Q8N3D4 1523 aa8.77□□□□□ -1.01
PTPN12-209ENST00000460731 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.77□□□□□ -1.01
PTPN12-209ENST00000460731 ARAP3Q8WWN8 1544 aa8.77□□□□□ -1.01
PTPN12-209ENST00000460731 SSTR3P32745 418 aaPredicted RBP8.77□□□□□ -1.01
PTPN12-209ENST00000460731 FAM69CQ0P6D2 419 aa8.77□□□□□ -1.01
PTPN12-209ENST00000460731 KIF13AQ9H1H9 1805 aa8.76□□□□□ -1.01
PTPN12-209ENST00000460731 MTMR2Q13614 643 aa8.76□□□□□ -1.01
PTPN12-209ENST00000460731 LYPD8Q6UX82 237 aa8.76□□□□□ -1.01
PTPN12-209ENST00000460731 FAM174AQ8TBP5 190 aa8.76□□□□□ -1.01
PTPN12-209ENST00000460731 PLCH2O75038 1416 aa8.76□□□□□ -1.01
PTPN12-209ENST00000460731 GPATCH8Q9UKJ3 1502 aaKnown RBP8.75□□□□□ -1.01
PTPN12-209ENST00000460731 PHLDB1Q86UU1 1377 aa8.75□□□□□ -1.01
PTPN12-209ENST00000460731 CD109Q6YHK3 1445 aa8.75□□□□□ -1.01
PTPN12-209ENST00000460731 GJA5P36382 358 aa8.75□□□□□ -1.01
PTPN12-209ENST00000460731 ZFAND3Q9H8U3 227 aa8.75□□□□□ -1.01
PTPN12-209ENST00000460731 MAP3K4Q9Y6R4 1608 aa8.75□□□□□ -1.01
PTPN12-209ENST00000460731 NCOA2Q15596 1464 aa8.75□□□□□ -1.01
PTPN12-209ENST00000460731 KIF14Q15058 1648 aa8.74□□□□□ -1.01
PTPN12-209ENST00000460731 PPFIA3O75145 1194 aa8.74□□□□□ -1.01
PTPN12-209ENST00000460731 NR3C2P08235 984 aa8.74□□□□□ -1.01
PTPN12-209ENST00000460731 KRI1Q8N9T8 703 aaKnown RBP8.74□□□□□ -1.01
PTPN12-209ENST00000460731 ITPKCQ96DU7 683 aa8.74□□□□□ -1.01
PTPN12-209ENST00000460731 TULP1O00294 542 aaPredicted RBP8.73□□□□□ -1.01
PTPN12-209ENST00000460731 ZIC2O95409 532 aaPredicted RBP8.73□□□□□ -1.01
PTPN12-209ENST00000460731 F12P00748 615 aaPredicted RBP8.73□□□□□ -1.01
PTPN12-209ENST00000460731 GRM5P41594 1212 aa8.73□□□□□ -1.01
PTPN12-209ENST00000460731 NR5A1Q13285 461 aa8.73□□□□□ -1.01
PTPN12-209ENST00000460731 FOXJ1Q92949 421 aa8.73□□□□□ -1.01
PTPN12-209ENST00000460731 MAN1A2O60476 641 aa8.72□□□□□ -1.01
PTPN12-209ENST00000460731 C4orf48Q5BLP8 95 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms