RNA–Protein interactions for RNA: ENST00000460639.2

ATRX-204, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-204ENST00000460639 VASH1Q7L8A9 365 aaPredicted RBP7.68□□□□□ -1.18
ATRX-204ENST00000460639 UCN2Q96RP3 112 aa7.68□□□□□ -1.18
ATRX-204ENST00000460639 ALDH1A1P00352 501 aa7.67□□□□□ -1.18
ATRX-204ENST00000460639 FSHRP23945 695 aa7.67□□□□□ -1.18
ATRX-204ENST00000460639 SOX11P35716 441 aa7.67□□□□□ -1.18
ATRX-204ENST00000460639 TRIM67Q6ZTA4 783 aa7.67□□□□□ -1.18
ATRX-204ENST00000460639 TRMT44Q8IYL2 757 aaKnown RBP7.67□□□□□ -1.18
ATRX-204ENST00000460639 CCDC97Q96F63 343 aaPredicted RBP7.67□□□□□ -1.18
ATRX-204ENST00000460639 CEP126Q9P2H0 1117 aa7.67□□□□□ -1.18
ATRX-204ENST00000460639 GDF9O60383 454 aa7.66□□□□□ -1.18
ATRX-204ENST00000460639 TSGA10IPQ3SY00 556 aa7.66□□□□□ -1.18
ATRX-204ENST00000460639 TBC1D9Q6ZT07 1266 aa7.66□□□□□ -1.18
ATRX-204ENST00000460639 KCTD15Q96SI1 283 aaPredicted RBP7.66□□□□□ -1.18
ATRX-204ENST00000460639 J3QL48 77 aa7.65□□□□□ -1.18
ATRX-204ENST00000460639 SLFNL1Q499Z3 407 aa7.65□□□□□ -1.18
ATRX-204ENST00000460639 RNF135Q8IUD6 432 aa7.65□□□□□ -1.18
ATRX-204ENST00000460639 TTC24A2A3L6 582 aaPredicted RBP7.64□□□□□ -1.19
ATRX-204ENST00000460639 SKIP12755 728 aa7.64□□□□□ -1.19
ATRX-204ENST00000460639 RFX1P22670 979 aa7.64□□□□□ -1.19
ATRX-204ENST00000460639 NBPF20Q3BBV1 942 aa7.64□□□□□ -1.19
ATRX-204ENST00000460639 INTS6LQ5JSJ4 861 aaKnown RBP7.64□□□□□ -1.19
ATRX-204ENST00000460639 CYP4X1Q8N118 509 aa7.64□□□□□ -1.19
ATRX-204ENST00000460639 DEPDC4Q8N2C3 294 aa7.64□□□□□ -1.19
ATRX-204ENST00000460639 TRAIPQ9BWF2 469 aa7.64□□□□□ -1.19
ATRX-204ENST00000460639 NR3C2P08235 984 aa7.63□□□□□ -1.19
ATRX-204ENST00000460639 GRM5P41594 1212 aa7.63□□□□□ -1.19
ATRX-204ENST00000460639 SNIP1Q8TAD8 396 aaKnown RBP7.63□□□□□ -1.19
ATRX-204ENST00000460639 CCDC85AQ96PX6 553 aaPredicted RBP7.63□□□□□ -1.19
ATRX-204ENST00000460639 CDK15Q96Q40 435 aa7.63□□□□□ -1.19
ATRX-204ENST00000460639 TFIP11Q9UBB9 837 aaKnown RBP7.63□□□□□ -1.19
ATRX-204ENST00000460639 PALM3A6NDB9 673 aaPredicted RBP7.62□□□□□ -1.19
ATRX-204ENST00000460639 ADH1CP00326 375 aa7.62□□□□□ -1.19
ATRX-204ENST00000460639 MCCD1P59942 119 aaPredicted RBP7.62□□□□□ -1.19
ATRX-204ENST00000460639 PHTF2Q8N3S3 785 aa7.62□□□□□ -1.19
ATRX-204ENST00000460639 KCTD17Q8N5Z5 321 aa7.62□□□□□ -1.19
ATRX-204ENST00000460639 ZNF428Q96B54 188 aa7.62□□□□□ -1.19
ATRX-204ENST00000460639 PPP1R12CQ9BZL4 782 aa7.62□□□□□ -1.19
ATRX-204ENST00000460639 TMPRSS4Q9NRS4 437 aa7.62□□□□□ -1.19
ATRX-204ENST00000460639 PDZRN3Q9UPQ7 1066 aa7.62□□□□□ -1.19
ATRX-204ENST00000460639 MAP4K5Q9Y4K4 846 aa7.62□□□□□ -1.19
ATRX-204ENST00000460639 WASF2Q9Y6W5 498 aa7.62□□□□□ -1.19
ATRX-204ENST00000460639 ESPNB1AK53 854 aa7.61□□□□□ -1.19
ATRX-204ENST00000460639 NNTQ13423 1086 aa7.61□□□□□ -1.19
ATRX-204ENST00000460639 OXLD1Q5BKU9 147 aa7.61□□□□□ -1.19
ATRX-204ENST00000460639 PLPP7Q8NBV4 271 aa7.61□□□□□ -1.19
ATRX-204ENST00000460639 ZNF592Q92610 1267 aa7.61□□□□□ -1.19
ATRX-204ENST00000460639 CDCA7Q9BWT1 371 aaPredicted RBP7.61□□□□□ -1.19
ATRX-204ENST00000460639 TOR4AQ9NXH8 423 aa7.61□□□□□ -1.19
ATRX-204ENST00000460639 SERPINA10Q9UK55 444 aa7.61□□□□□ -1.19
ATRX-204ENST00000460639 CDV3Q9UKY7 258 aaKnown RBP7.61□□□□□ -1.19
ATRX-204ENST00000460639 PCDHB11Q9Y5F2 797 aa7.61□□□□□ -1.19
ATRX-204ENST00000460639 USP17L5A8MUK1 530 aa7.6□□□□□ -1.19
ATRX-204ENST00000460639 ERVH48-1M5A8F1 160 aa7.6□□□□□ -1.19
ATRX-204ENST00000460639 SMPD1P17405 629 aa7.6□□□□□ -1.19
ATRX-204ENST00000460639 LMOD1P29536 600 aaPredicted RBP7.6□□□□□ -1.19
ATRX-204ENST00000460639 CDCA8Q53HL2 280 aa7.6□□□□□ -1.19
ATRX-204ENST00000460639 CFAP70Q5T0N1 1121 aa7.6□□□□□ -1.19
ATRX-204ENST00000460639 DOLKQ9UPQ8 538 aa7.6□□□□□ -1.19
ATRX-204ENST00000460639 ATP9BO43861 1147 aa7.59□□□□□ -1.19
ATRX-204ENST00000460639 CCDC116Q8IYX3 515 aa7.59□□□□□ -1.19
ATRX-204ENST00000460639 CYLDQ9NQC7 956 aa7.59□□□□□ -1.19
ATRX-204ENST00000460639 MTMR7Q9Y216 660 aa7.59□□□□□ -1.19
ATRX-204ENST00000460639 MAFBQ9Y5Q3 323 aaPredicted RBP7.59□□□□□ -1.19
ATRX-204ENST00000460639 USP17L3A6NCW0 530 aa7.58□□□□□ -1.2
ATRX-204ENST00000460639 USP17L4A6NCW7 530 aa7.58□□□□□ -1.2
ATRX-204ENST00000460639 FAM187AA6NFU0 413 aa7.58□□□□□ -1.2
ATRX-204ENST00000460639 SCTRP47872 440 aa7.58□□□□□ -1.2
ATRX-204ENST00000460639 PRR20EP86478 221 aa7.58□□□□□ -1.2
ATRX-204ENST00000460639 PRR20CP86479 221 aa7.58□□□□□ -1.2
ATRX-204ENST00000460639 PRR20DP86480 221 aa7.58□□□□□ -1.2
ATRX-204ENST00000460639 PRR20BP86481 221 aa7.58□□□□□ -1.2
ATRX-204ENST00000460639 PRR20AP86496 221 aa7.58□□□□□ -1.2
ATRX-204ENST00000460639 NCOA4Q13772 614 aa7.58□□□□□ -1.2
ATRX-204ENST00000460639 PPP1R26Q5T8A7 1209 aaPredicted RBP7.58□□□□□ -1.2
ATRX-204ENST00000460639 USP17L2Q6R6M4 530 aa7.58□□□□□ -1.2
ATRX-204ENST00000460639 USP17L1Q7RTZ2 530 aa7.58□□□□□ -1.2
ATRX-204ENST00000460639 MPNDQ8N594 471 aa7.58□□□□□ -1.2
ATRX-204ENST00000460639 HPS1Q92902 700 aa7.58□□□□□ -1.2
ATRX-204ENST00000460639 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.57□□□□□ -1.2
ATRX-204ENST00000460639 GFRA3O60609 400 aa7.57□□□□□ -1.2
ATRX-204ENST00000460639 NR5A1Q13285 461 aa7.57□□□□□ -1.2
ATRX-204ENST00000460639 RNF20Q5VTR2 975 aa7.57□□□□□ -1.2
ATRX-204ENST00000460639 TRAF7Q6Q0C0 670 aa7.57□□□□□ -1.2
ATRX-204ENST00000460639 SHROOM4Q9ULL8 1493 aa7.56□□□□□ -1.2
ATRX-204ENST00000460639 SEPT12Q8IYM1 358 aa7.56□□□□□ -1.2
ATRX-204ENST00000460639 ZNF784Q8NCA9 323 aaPredicted RBP7.56□□□□□ -1.2
ATRX-204ENST00000460639 ZFAND3Q9H8U3 227 aa7.56□□□□□ -1.2
ATRX-204ENST00000460639 WDR4P57081 412 aaKnown RBP7.55□□□□□ -1.2
ATRX-204ENST00000460639 NFATC2IPQ8NCF5 419 aa7.55□□□□□ -1.2
ATRX-204ENST00000460639 ITPKCQ96DU7 683 aa7.55□□□□□ -1.2
ATRX-204ENST00000460639 CHIC2Q9UKJ5 165 aa7.55□□□□□ -1.2
ATRX-204ENST00000460639 ZIC2O95409 532 aaPredicted RBP7.54□□□□□ -1.2
ATRX-204ENST00000460639 DHX9Q08211 1270 aaKnown RBP7.54□□□□□ -1.2
ATRX-204ENST00000460639 CBLBQ13191 982 aa7.54□□□□□ -1.2
ATRX-204ENST00000460639 EML3Q32P44 896 aa7.54□□□□□ -1.2
ATRX-204ENST00000460639 STAU1O95793 577 aaKnown RBP7.53□□□□□ -1.2
ATRX-204ENST00000460639 MAP7D1Q3KQU3 841 aa7.53□□□□□ -1.2
ATRX-204ENST00000460639 FOXD4L5Q5VV16 416 aaPredicted RBP7.53□□□□□ -1.2
ATRX-204ENST00000460639 FOXD4L4Q8WXT5 416 aaPredicted RBP7.53□□□□□ -1.2
ATRX-204ENST00000460639 MKRN1Q9UHC7 482 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms