RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 TBC1D32Q96NH3 1257 aa22.93■■□□□ 1.26
HPS3-202ENST00000460120 CPSF1Q10570 1443 aaKnown RBP22.93■■□□□ 1.26
HPS3-202ENST00000460120 RTN4Q9NQC3 1192 aaKnown RBP22.92■■□□□ 1.26
HPS3-202ENST00000460120 MAP2P11137 1827 aaKnown RBP22.92■■□□□ 1.26
HPS3-202ENST00000460120 DLC1Q96QB1 1528 aa22.92■■□□□ 1.26
HPS3-202ENST00000460120 GSE1Q14687 1217 aa22.91■■□□□ 1.26
HPS3-202ENST00000460120 KRT24Q2M2I5 525 aa22.91■■□□□ 1.26
HPS3-202ENST00000460120 TWISTNBQ3B726 338 aaPredicted RBP22.91■■□□□ 1.26
HPS3-202ENST00000460120 ALDH1L2Q3SY69 923 aa22.91■■□□□ 1.26
HPS3-202ENST00000460120 ROBO2Q9HCK4 1378 aa22.91■■□□□ 1.26
HPS3-202ENST00000460120 SULT6B1Q6IMI4 303 aa22.91■■□□□ 1.26
HPS3-202ENST00000460120 IL27Q8NEV9 243 aa22.91■■□□□ 1.26
HPS3-202ENST00000460120 TNRQ92752 1358 aa22.9■■□□□ 1.26
HPS3-202ENST00000460120 GNAI1P63096 354 aa22.9■■□□□ 1.26
HPS3-202ENST00000460120 MRPL50Q8N5N7 158 aaKnown RBP22.9■■□□□ 1.26
HPS3-202ENST00000460120 TBC1D2Q9BYX2 928 aa22.89■■□□□ 1.26
HPS3-202ENST00000460120 NRXN3Q9Y4C0 1643 aa22.89■■□□□ 1.26
HPS3-202ENST00000460120 LTKP29376 864 aa22.89■■□□□ 1.25
HPS3-202ENST00000460120 ANKRD45Q5TZF3 282 aa22.89■■□□□ 1.25
HPS3-202ENST00000460120 ANO8Q9HCE9 1232 aaPredicted RBP22.89■■□□□ 1.25
HPS3-202ENST00000460120 HDGFP51858 240 aaKnown RBP22.88■■□□□ 1.25
HPS3-202ENST00000460120 SETD1AO15047 1707 aaKnown RBP22.88■■□□□ 1.25
HPS3-202ENST00000460120 VIRMAQ69YN4 1812 aaKnown RBP22.88■■□□□ 1.25
HPS3-202ENST00000460120 MCM10Q7L590 875 aa22.88■■□□□ 1.25
HPS3-202ENST00000460120 SMC5Q8IY18 1101 aa22.88■■□□□ 1.25
HPS3-202ENST00000460120 IFT57Q9NWB7 429 aa22.88■■□□□ 1.25
HPS3-202ENST00000460120 ACEP12821 1306 aa22.87■■□□□ 1.25
HPS3-202ENST00000460120 C22orf23Q9BZE7 217 aa22.87■■□□□ 1.25
HPS3-202ENST00000460120 CALD1Q05682 793 aaKnown RBP22.86■■□□□ 1.25
HPS3-202ENST00000460120 EIF4A2Q14240 407 aaKnown RBP22.86■■□□□ 1.25
HPS3-202ENST00000460120 HSP90AB2PQ58FF8 381 aa22.86■■□□□ 1.25
HPS3-202ENST00000460120 REREQ9P2R6 1566 aa22.85■■□□□ 1.25
HPS3-202ENST00000460120 ZBTB7BO15156 539 aaPredicted RBP22.85■■□□□ 1.25
HPS3-202ENST00000460120 CHD1LQ86WJ1 897 aa22.84■■□□□ 1.25
HPS3-202ENST00000460120 TMEM2Q9UHN6 1383 aa22.84■■□□□ 1.25
HPS3-202ENST00000460120 MIS18AQ9NYP9 233 aa22.84■■□□□ 1.25
HPS3-202ENST00000460120 NUCB1Q02818 461 aa22.83■■□□□ 1.25
HPS3-202ENST00000460120 CFAP44Q96MT7 982 aa22.83■■□□□ 1.25
HPS3-202ENST00000460120 TTC21BQ7Z4L5 1316 aa22.83■■□□□ 1.25
HPS3-202ENST00000460120 CDK12Q9NYV4 1490 aaPredicted RBP22.83■■□□□ 1.24
HPS3-202ENST00000460120 CDC42BPGQ6DT37 1551 aa22.82■■□□□ 1.24
HPS3-202ENST00000460120 ZNF853P0CG23 659 aa22.81■■□□□ 1.24
HPS3-202ENST00000460120 ZNF692Q9BU19 519 aaPredicted RBP22.81■■□□□ 1.24
HPS3-202ENST00000460120 BRPF3Q9ULD4 1205 aa22.81■■□□□ 1.24
HPS3-202ENST00000460120 LMOD3Q0VAK6 560 aa22.81■■□□□ 1.24
HPS3-202ENST00000460120 AATKQ6ZMQ8 1374 aa22.8■■□□□ 1.24
HPS3-202ENST00000460120 NUTM2GQ5VZR2 741 aa22.8■■□□□ 1.24
HPS3-202ENST00000460120 ARXQ96QS3 562 aa22.8■■□□□ 1.24
HPS3-202ENST00000460120 APBB1O00213 710 aa22.79■■□□□ 1.24
HPS3-202ENST00000460120 SIRT2Q8IXJ6 389 aa22.79■■□□□ 1.24
HPS3-202ENST00000460120 FOXO3O43524 673 aa22.78■■□□□ 1.24
HPS3-202ENST00000460120 ZNF428Q96B54 188 aa22.76■■□□□ 1.23
HPS3-202ENST00000460120 AMOTL2Q9Y2J4 779 aa22.76■■□□□ 1.23
HPS3-202ENST00000460120 ADAMTS13Q76LX8 1427 aa22.76■■□□□ 1.23
HPS3-202ENST00000460120 NGDNQ8NEJ9 315 aaKnown RBP22.75■■□□□ 1.23
HPS3-202ENST00000460120 ANTXR1Q9H6X2 564 aa22.75■■□□□ 1.23
HPS3-202ENST00000460120 ABCC4O15439 1325 aa22.74■■□□□ 1.23
HPS3-202ENST00000460120 ARHGAP45Q92619 1136 aa22.73■■□□□ 1.23
HPS3-202ENST00000460120 EID1Q9Y6B2 187 aa22.73■■□□□ 1.23
HPS3-202ENST00000460120 TECPR2O15040 1411 aa22.72■■□□□ 1.23
HPS3-202ENST00000460120 PLEKHG5O94827 1062 aa22.72■■□□□ 1.23
HPS3-202ENST00000460120 BRPF1P55201 1214 aaPredicted RBP22.72■■□□□ 1.23
HPS3-202ENST00000460120 API5Q9BZZ5 524 aaKnown RBP22.72■■□□□ 1.23
HPS3-202ENST00000460120 PTCH1Q13635 1447 aa22.72■■□□□ 1.23
HPS3-202ENST00000460120 SIRT1Q96EB6 747 aa22.72■■□□□ 1.23
HPS3-202ENST00000460120 FOXD4L1Q9NU39 408 aa22.71■■□□□ 1.23
HPS3-202ENST00000460120 PTPRUQ92729 1446 aa22.7■■□□□ 1.22
HPS3-202ENST00000460120 C16orf71Q8IYS4 520 aaPredicted RBP22.7■■□□□ 1.22
HPS3-202ENST00000460120 GCC1Q96CN9 775 aa22.7■■□□□ 1.22
HPS3-202ENST00000460120 MAP3K19Q56UN5 1328 aa22.7■■□□□ 1.22
HPS3-202ENST00000460120 DLG5Q8TDM6 1919 aa22.69■■□□□ 1.22
HPS3-202ENST00000460120 MON2Q7Z3U7 1717 aa22.69■■□□□ 1.22
HPS3-202ENST00000460120 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.69■■□□□ 1.22
HPS3-202ENST00000460120 HSCBQ8IWL3 235 aa22.69■■□□□ 1.22
HPS3-202ENST00000460120 NECTIN2Q92692 538 aa22.69■■□□□ 1.22
HPS3-202ENST00000460120 RBM33Q96EV2 1170 aaKnown RBP22.69■■□□□ 1.22
HPS3-202ENST00000460120 LTV1Q96GA3 475 aaPredicted RBP22.69■■□□□ 1.22
HPS3-202ENST00000460120 AMPHP49418 695 aa22.69■■□□□ 1.22
HPS3-202ENST00000460120 C14orf37Q86TY3 774 aa22.69■■□□□ 1.22
HPS3-202ENST00000460120 ITSN1Q15811 1721 aa22.69■■□□□ 1.22
HPS3-202ENST00000460120 USP6P35125 1406 aa22.69■■□□□ 1.22
HPS3-202ENST00000460120 C3P01024 1663 aa22.68■■□□□ 1.22
HPS3-202ENST00000460120 SLC4A10Q6U841 1118 aa22.68■■□□□ 1.22
HPS3-202ENST00000460120 KIF13AQ9H1H9 1805 aa22.68■■□□□ 1.22
HPS3-202ENST00000460120 PLEKHG3A1L390 1219 aa22.67■■□□□ 1.22
HPS3-202ENST00000460120 GZF1Q9H116 711 aaPredicted RBP22.67■■□□□ 1.22
HPS3-202ENST00000460120 MTHFSDQ2M296 383 aaKnown RBP22.67■■□□□ 1.22
HPS3-202ENST00000460120 UBR1Q8IWV7 1749 aa22.67■■□□□ 1.22
HPS3-202ENST00000460120 CHMP4BQ9H444 224 aaKnown RBP22.67■■□□□ 1.22
HPS3-202ENST00000460120 SLC4A2P04920 1241 aa22.66■■□□□ 1.22
HPS3-202ENST00000460120 TBC1D9Q6ZT07 1266 aa22.66■■□□□ 1.22
HPS3-202ENST00000460120 F6X3S4 739 aa22.66■■□□□ 1.22
HPS3-202ENST00000460120 SMARCA5O60264 1052 aaPredicted RBP22.66■■□□□ 1.22
HPS3-202ENST00000460120 BMP2KLQ5H9B9 411 aa22.66■■□□□ 1.22
HPS3-202ENST00000460120 PIK3R4Q99570 1358 aa22.65■■□□□ 1.22
HPS3-202ENST00000460120 PLEKHG1Q9ULL1 1385 aa22.65■■□□□ 1.22
HPS3-202ENST00000460120 CHL1O00533 1208 aa22.65■■□□□ 1.22
HPS3-202ENST00000460120 OTUD7AQ8TE49 926 aaPredicted RBP22.65■■□□□ 1.22
HPS3-202ENST00000460120 RTF1Q92541 710 aaKnown RBP22.65■■□□□ 1.22
HPS3-202ENST00000460120 OVOS2A0A0J9YW53 1432 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms