RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 LRRC59Q96AG4 307 aaKnown RBP11.92□□□□□ -0.5
NUDCD3-203ENST00000460110 IPO8O15397 1037 aaKnown RBP11.92□□□□□ -0.5
NUDCD3-203ENST00000460110 EYA1Q99502 592 aa11.92□□□□□ -0.5
NUDCD3-203ENST00000460110 TSPYL4Q9UJ04 414 aa11.92□□□□□ -0.5
NUDCD3-203ENST00000460110 REREQ9P2R6 1566 aa11.92□□□□□ -0.5
NUDCD3-203ENST00000460110 MBIPQ9NS73 344 aa11.92□□□□□ -0.5
NUDCD3-203ENST00000460110 KRT28Q7Z3Y7 464 aa11.91□□□□□ -0.5
NUDCD3-203ENST00000460110 PDE4AP27815 886 aa11.91□□□□□ -0.5
NUDCD3-203ENST00000460110 TRMT2AQ8IZ69 625 aaKnown RBP11.91□□□□□ -0.5
NUDCD3-203ENST00000460110 NLRP2Q9NX02 1062 aa11.91□□□□□ -0.5
NUDCD3-203ENST00000460110 EIF2S2P20042 333 aaKnown RBP11.91□□□□□ -0.5
NUDCD3-203ENST00000460110 C8orf58Q8NAV2 365 aa11.91□□□□□ -0.5
NUDCD3-203ENST00000460110 IGHDP01880 384 aa11.9□□□□□ -0.5
NUDCD3-203ENST00000460110 CENPQQ7L2Z9 268 aaPredicted RBP11.9□□□□□ -0.5
NUDCD3-203ENST00000460110 TRIM27P14373 513 aa11.9□□□□□ -0.5
NUDCD3-203ENST00000460110 PDE3AQ14432 1141 aa11.9□□□□□ -0.5
NUDCD3-203ENST00000460110 CHRNA2Q15822 529 aa11.9□□□□□ -0.5
NUDCD3-203ENST00000460110 ZBTB47Q9UFB7 747 aaPredicted RBP11.9□□□□□ -0.5
NUDCD3-203ENST00000460110 CPS1P31327 1500 aa11.9□□□□□ -0.5
NUDCD3-203ENST00000460110 TMEM57Q8N5G2 664 aa11.9□□□□□ -0.51
NUDCD3-203ENST00000460110 CCDC27Q2M243 656 aa11.89□□□□□ -0.51
NUDCD3-203ENST00000460110 MTHFSDQ2M296 383 aaKnown RBP11.89□□□□□ -0.51
NUDCD3-203ENST00000460110 USP35Q9P2H5 1018 aa11.89□□□□□ -0.51
NUDCD3-203ENST00000460110 ATF7IPQ6VMQ6 1270 aa11.88□□□□□ -0.51
NUDCD3-203ENST00000460110 ATP7BP35670 1465 aa11.88□□□□□ -0.51
NUDCD3-203ENST00000460110 USP6P35125 1406 aa11.88□□□□□ -0.51
NUDCD3-203ENST00000460110 CPSF1Q10570 1443 aaKnown RBP11.88□□□□□ -0.51
NUDCD3-203ENST00000460110 TTC21AQ8NDW8 1320 aa11.88□□□□□ -0.51
NUDCD3-203ENST00000460110 MS4A1P11836 297 aa11.87□□□□□ -0.51
NUDCD3-203ENST00000460110 PCDHB15Q9Y5E8 787 aa11.87□□□□□ -0.51
NUDCD3-203ENST00000460110 HOXC9P31274 260 aa11.87□□□□□ -0.51
NUDCD3-203ENST00000460110 RWDD1Q9H446 243 aaPredicted RBP11.87□□□□□ -0.51
NUDCD3-203ENST00000460110 C19orf44Q9H6X5 657 aa11.87□□□□□ -0.51
NUDCD3-203ENST00000460110 MYO3AQ8NEV4 1616 aa11.87□□□□□ -0.51
NUDCD3-203ENST00000460110 NBR1Q14596 966 aa11.86□□□□□ -0.51
NUDCD3-203ENST00000460110 INSRP06213 1382 aa11.86□□□□□ -0.51
NUDCD3-203ENST00000460110 GCP02774 474 aa11.86□□□□□ -0.51
NUDCD3-203ENST00000460110 SETD1BQ9UPS6 1966 aaKnown RBP11.86□□□□□ -0.51
NUDCD3-203ENST00000460110 SLC4A2P04920 1241 aa11.86□□□□□ -0.51
NUDCD3-203ENST00000460110 TEFQ10587 303 aa11.86□□□□□ -0.51
NUDCD3-203ENST00000460110 MVPQ14764 893 aaKnown RBP11.86□□□□□ -0.51
NUDCD3-203ENST00000460110 RIMS1Q86UR5 1692 aaKnown RBP11.86□□□□□ -0.51
NUDCD3-203ENST00000460110 MPRIPQ6WCQ1 1025 aa11.85□□□□□ -0.51
NUDCD3-203ENST00000460110 CFAP44Q96MT7 982 aa11.85□□□□□ -0.51
NUDCD3-203ENST00000460110 NPHP4O75161 1426 aaPredicted RBP11.85□□□□□ -0.51
NUDCD3-203ENST00000460110 ZNF530Q6P9A1 599 aaPredicted RBP11.85□□□□□ -0.51
NUDCD3-203ENST00000460110 GAS2L2Q8NHY3 880 aa11.85□□□□□ -0.51
NUDCD3-203ENST00000460110 STK31Q9BXU1 1019 aa11.85□□□□□ -0.51
NUDCD3-203ENST00000460110 SLC4A3P48751 1232 aa11.84□□□□□ -0.51
NUDCD3-203ENST00000460110 IFT57Q9NWB7 429 aa11.84□□□□□ -0.51
NUDCD3-203ENST00000460110 DDX19BQ9UMR2 479 aa11.84□□□□□ -0.51
NUDCD3-203ENST00000460110 KIF16BQ96L93 1317 aa11.84□□□□□ -0.51
NUDCD3-203ENST00000460110 FER1L4A9Z1Z3 1794 aa11.84□□□□□ -0.51
NUDCD3-203ENST00000460110 VAMP4O75379 141 aa11.84□□□□□ -0.51
NUDCD3-203ENST00000460110 FLT4P35916 1363 aa11.84□□□□□ -0.51
NUDCD3-203ENST00000460110 DLC1Q96QB1 1528 aa11.84□□□□□ -0.51
NUDCD3-203ENST00000460110 ARXQ96QS3 562 aa11.84□□□□□ -0.51
NUDCD3-203ENST00000460110 F6X3S4 739 aa11.84□□□□□ -0.51
NUDCD3-203ENST00000460110 NBPF6Q5VWK0 638 aa11.84□□□□□ -0.51
NUDCD3-203ENST00000460110 NBPF4Q96M43 638 aa11.84□□□□□ -0.51
NUDCD3-203ENST00000460110 TECPR2O15040 1411 aa11.83□□□□□ -0.52
NUDCD3-203ENST00000460110 C1orf141Q5JVX7 400 aa11.83□□□□□ -0.52
NUDCD3-203ENST00000460110 PHF23Q9BUL5 403 aaPredicted RBP11.83□□□□□ -0.52
NUDCD3-203ENST00000460110 LNPKQ9C0E8 428 aa11.83□□□□□ -0.52
NUDCD3-203ENST00000460110 STRN4Q9NRL3 753 aa11.83□□□□□ -0.52
NUDCD3-203ENST00000460110 UBR1Q8IWV7 1749 aa11.83□□□□□ -0.52
NUDCD3-203ENST00000460110 TMEM94Q12767 1356 aa11.83□□□□□ -0.52
NUDCD3-203ENST00000460110 PNPLA6Q8IY17 1366 aa11.83□□□□□ -0.52
NUDCD3-203ENST00000460110 C3P01024 1663 aa11.83□□□□□ -0.52
NUDCD3-203ENST00000460110 GNAT3A8MTJ3 354 aa11.83□□□□□ -0.52
NUDCD3-203ENST00000460110 FKBP5Q13451 457 aaPredicted RBP11.83□□□□□ -0.52
NUDCD3-203ENST00000460110 PDZRN3Q9UPQ7 1066 aa11.83□□□□□ -0.52
NUDCD3-203ENST00000460110 ANKRD45Q5TZF3 282 aa11.82□□□□□ -0.52
NUDCD3-203ENST00000460110 KCNH5Q8NCM2 988 aa11.82□□□□□ -0.52
NUDCD3-203ENST00000460110 ANKRD24Q8TF21 1146 aa11.82□□□□□ -0.52
NUDCD3-203ENST00000460110 ANXA1P04083 346 aa11.81□□□□□ -0.52
NUDCD3-203ENST00000460110 RAPGEF4Q8WZA2 1011 aa11.81□□□□□ -0.52
NUDCD3-203ENST00000460110 AATKQ6ZMQ8 1374 aa11.81□□□□□ -0.52
NUDCD3-203ENST00000460110 CEP170BQ9Y4F5 1589 aaPredicted RBP11.8□□□□□ -0.52
NUDCD3-203ENST00000460110 NRXN3Q9Y4C0 1643 aa11.8□□□□□ -0.52
NUDCD3-203ENST00000460110 CADPS2Q86UW7 1296 aa11.8□□□□□ -0.52
NUDCD3-203ENST00000460110 IL16Q14005 1332 aa11.8□□□□□ -0.52
NUDCD3-203ENST00000460110 LGR6Q9HBX8 967 aa11.8□□□□□ -0.52
NUDCD3-203ENST00000460110 PRDM11Q9NQV5 511 aa11.8□□□□□ -0.52
NUDCD3-203ENST00000460110 SBNO1A3KN83 1393 aa11.8□□□□□ -0.52
NUDCD3-203ENST00000460110 ZNF330Q9Y3S2 320 aaPredicted RBP11.79□□□□□ -0.52
NUDCD3-203ENST00000460110 MSH5O43196 834 aa11.79□□□□□ -0.52
NUDCD3-203ENST00000460110 CT47B1P0C2W7 299 aaPredicted RBP11.79□□□□□ -0.52
NUDCD3-203ENST00000460110 IP6K1Q92551 441 aa11.79□□□□□ -0.52
NUDCD3-203ENST00000460110 ZNF335Q9H4Z2 1342 aaPredicted RBP11.79□□□□□ -0.52
NUDCD3-203ENST00000460110 BACH2Q9BYV9 841 aa11.79□□□□□ -0.52
NUDCD3-203ENST00000460110 EVA1CP58658 441 aa11.78□□□□□ -0.52
NUDCD3-203ENST00000460110 API5Q9BZZ5 524 aaKnown RBP11.78□□□□□ -0.52
NUDCD3-203ENST00000460110 AIMP1Q12904 312 aaKnown RBP11.78□□□□□ -0.52
NUDCD3-203ENST00000460110 PLEKHO1Q53GL0 409 aaPredicted RBP11.78□□□□□ -0.52
NUDCD3-203ENST00000460110 ARHGAP23Q9P227 1491 aa11.78□□□□□ -0.52
NUDCD3-203ENST00000460110 HDGFL1Q5TGJ6 251 aa11.78□□□□□ -0.52
NUDCD3-203ENST00000460110 MRPL50Q8N5N7 158 aaKnown RBP11.78□□□□□ -0.52
NUDCD3-203ENST00000460110 AXIN2Q9Y2T1 843 aa11.78□□□□□ -0.52
NUDCD3-203ENST00000460110 FAM161AQ3B820 660 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms