RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 CCDC27Q2M243 656 aa32.15■■■□□ 2.74
U2AF1-204ENST00000459639 DDX17Q92841 729 aaKnown RBP32.14■■■□□ 2.74
U2AF1-204ENST00000459639 CDCA7LQ96GN5 454 aa32.14■■■□□ 2.74
U2AF1-204ENST00000459639 PHF23Q9BUL5 403 aaPredicted RBP32.14■■■□□ 2.74
U2AF1-204ENST00000459639 MED1Q15648 1581 aaPredicted RBP32.14■■■□□ 2.73
U2AF1-204ENST00000459639 HOXC9P31274 260 aa32.13■■■□□ 2.73
U2AF1-204ENST00000459639 LMOD2Q6P5Q4 547 aa32.13■■■□□ 2.73
U2AF1-204ENST00000459639 CRYBG1Q9Y4K1 1723 aa32.13■■■□□ 2.73
U2AF1-204ENST00000459639 PRKAR2BP31323 418 aa32.11■■■□□ 2.73
U2AF1-204ENST00000459639 ARHGEF10O15013 1369 aa32.11■■■□□ 2.73
U2AF1-204ENST00000459639 WWC1Q8IX03 1113 aa32.11■■■□□ 2.73
U2AF1-204ENST00000459639 GCP02774 474 aa32.1■■■□□ 2.73
U2AF1-204ENST00000459639 NEFMP07197 916 aa32.1■■■□□ 2.73
U2AF1-204ENST00000459639 HMOX1P09601 288 aa32.1■■■□□ 2.73
U2AF1-204ENST00000459639 RRP7AQ9Y3A4 280 aaKnown RBP32.1■■■□□ 2.73
U2AF1-204ENST00000459639 SPATA31A3Q5VYP0 1347 aa32.1■■■□□ 2.73
U2AF1-204ENST00000459639 SUPT16HQ9Y5B9 1047 aaKnown RBP32.08■■■□□ 2.73
U2AF1-204ENST00000459639 TMPOP42166 694 aaKnown RBP32.08■■■□□ 2.73
U2AF1-204ENST00000459639 NEUROD2Q15784 382 aa32.08■■■□□ 2.73
U2AF1-204ENST00000459639 SOS2Q07890 1332 aaPredicted RBP32.07■■■□□ 2.72
U2AF1-204ENST00000459639 IP6K1Q92551 441 aa32.06■■■□□ 2.72
U2AF1-204ENST00000459639 SLFN5Q08AF3 891 aa32.05■■■□□ 2.72
U2AF1-204ENST00000459639 E9PSI1 815 aa32.04■■■□□ 2.72
U2AF1-204ENST00000459639 ARHGEF25Q86VW2 580 aa32.04■■■□□ 2.72
U2AF1-204ENST00000459639 WDR63Q8IWG1 891 aa32.04■■■□□ 2.72
U2AF1-204ENST00000459639 NEFLP07196 543 aa32.03■■■□□ 2.72
U2AF1-204ENST00000459639 IGSF1Q8N6C5 1336 aa32.03■■■□□ 2.72
U2AF1-204ENST00000459639 DUSP27Q5VZP5 1158 aa32.02■■■□□ 2.72
U2AF1-204ENST00000459639 TRMT2AQ8IZ69 625 aaKnown RBP32.02■■■□□ 2.72
U2AF1-204ENST00000459639 KDRP35968 1356 aa32.02■■■□□ 2.72
U2AF1-204ENST00000459639 SULT6B1Q6IMI4 303 aa32.02■■■□□ 2.72
U2AF1-204ENST00000459639 DLG5Q8TDM6 1919 aa32.01■■■□□ 2.72
U2AF1-204ENST00000459639 ROBO1Q9Y6N7 1651 aa32■■■□□ 2.71
U2AF1-204ENST00000459639 ABCC6O95255 1503 aa31.99■■■□□ 2.71
U2AF1-204ENST00000459639 NFE2L2Q16236 605 aa31.99■■■□□ 2.71
U2AF1-204ENST00000459639 AEBP1Q8IUX7 1158 aa31.99■■■□□ 2.71
U2AF1-204ENST00000459639 PHACTR3Q96KR7 559 aa31.99■■■□□ 2.71
U2AF1-204ENST00000459639 RIPK4P57078 832 aa31.98■■■□□ 2.71
U2AF1-204ENST00000459639 EYA1Q99502 592 aa31.98■■■□□ 2.71
U2AF1-204ENST00000459639 TRIM35Q9UPQ4 493 aa31.97■■■□□ 2.71
U2AF1-204ENST00000459639 ABCA3Q99758 1704 aa31.96■■■□□ 2.71
U2AF1-204ENST00000459639 SPINK5Q9NQ38 1064 aaPredicted RBP31.96■■■□□ 2.71
U2AF1-204ENST00000459639 AHDC1Q5TGY3 1603 aaPredicted RBP31.95■■■□□ 2.71
U2AF1-204ENST00000459639 RNF123Q5XPI4 1314 aa31.94■■■□□ 2.7
U2AF1-204ENST00000459639 RGPD5Q99666 1765 aa31.94■■■□□ 2.7
U2AF1-204ENST00000459639 RCAN3Q9UKA8 241 aa31.94■■■□□ 2.7
U2AF1-204ENST00000459639 COL18A1P39060 1754 aa31.94■■■□□ 2.7
U2AF1-204ENST00000459639 ZBTB7CA1YPR0 619 aa31.93■■■□□ 2.7
U2AF1-204ENST00000459639 PLEKHG5O94827 1062 aa31.93■■■□□ 2.7
U2AF1-204ENST00000459639 CAMTA1Q9Y6Y1 1673 aa31.93■■■□□ 2.7
U2AF1-204ENST00000459639 RGPD2P0DJD1 1756 aa31.93■■■□□ 2.7
U2AF1-204ENST00000459639 LTV1Q96GA3 475 aaPredicted RBP31.91■■■□□ 2.7
U2AF1-204ENST00000459639 IL16Q14005 1332 aa31.91■■■□□ 2.7
U2AF1-204ENST00000459639 FKBP8Q14318 412 aa31.9■■■□□ 2.7
U2AF1-204ENST00000459639 CPDO75976 1380 aa31.9■■■□□ 2.7
U2AF1-204ENST00000459639 LMOD3Q0VAK6 560 aa31.89■■■□□ 2.7
U2AF1-204ENST00000459639 FAM208AQ9UK61 1670 aaKnown RBP31.87■■■□□ 2.69
U2AF1-204ENST00000459639 ZC3H6P61129 1189 aaKnown RBP31.87■■■□□ 2.69
U2AF1-204ENST00000459639 CABLES1Q8TDN4 633 aa31.87■■■□□ 2.69
U2AF1-204ENST00000459639 MYH16Q9H6N6 1097 aa31.87■■■□□ 2.69
U2AF1-204ENST00000459639 NCAPD2Q15021 1401 aa31.87■■■□□ 2.69
U2AF1-204ENST00000459639 AEBP2Q6ZN18 517 aaPredicted RBP31.86■■■□□ 2.69
U2AF1-204ENST00000459639 LMO7Q8WWI1 1683 aa31.85■■■□□ 2.69
U2AF1-204ENST00000459639 CALD1Q05682 793 aaKnown RBP31.83■■■□□ 2.69
U2AF1-204ENST00000459639 ANKRD24Q8TF21 1146 aa31.83■■■□□ 2.69
U2AF1-204ENST00000459639 AXIN2Q9Y2T1 843 aa31.82■■■□□ 2.68
U2AF1-204ENST00000459639 NBPF6Q5VWK0 638 aa31.81■■■□□ 2.68
U2AF1-204ENST00000459639 NBPF4Q96M43 638 aa31.81■■■□□ 2.68
U2AF1-204ENST00000459639 KIAA0232Q92628 1395 aa31.8■■■□□ 2.68
U2AF1-204ENST00000459639 COL22A1Q8NFW1 1626 aaPredicted RBP31.8■■■□□ 2.68
U2AF1-204ENST00000459639 ERBB3P21860 1342 aa31.8■■■□□ 2.68
U2AF1-204ENST00000459639 RRP1P56182 461 aaKnown RBP31.78■■■□□ 2.68
U2AF1-204ENST00000459639 GAS2L2Q8NHY3 880 aa31.78■■■□□ 2.68
U2AF1-204ENST00000459639 PHLPP1O60346 1717 aa31.78■■■□□ 2.68
U2AF1-204ENST00000459639 FANCIQ9NVI1 1328 aa31.77■■■□□ 2.68
U2AF1-204ENST00000459639 ERICH6BQ5W0A0 696 aa31.76■■■□□ 2.68
U2AF1-204ENST00000459639 USHBP1Q8N6Y0 703 aa31.76■■■□□ 2.68
U2AF1-204ENST00000459639 LRRC59Q96AG4 307 aaKnown RBP31.76■■■□□ 2.68
U2AF1-204ENST00000459639 TOM1O60784 492 aa31.75■■■□□ 2.67
U2AF1-204ENST00000459639 MTHFSDQ2M296 383 aaKnown RBP31.75■■■□□ 2.67
U2AF1-204ENST00000459639 COL16A1Q07092 1604 aaPredicted RBP31.74■■■□□ 2.67
U2AF1-204ENST00000459639 IRX6P78412 446 aaPredicted RBP31.73■■■□□ 2.67
U2AF1-204ENST00000459639 HAP1P54257 671 aaPredicted RBP31.73■■■□□ 2.67
U2AF1-204ENST00000459639 IFT57Q9NWB7 429 aa31.72■■■□□ 2.67
U2AF1-204ENST00000459639 CHRNA2Q15822 529 aa31.71■■■□□ 2.67
U2AF1-204ENST00000459639 LRRC37A3O60309 1634 aa31.71■■■□□ 2.67
U2AF1-204ENST00000459639 THUMPD2Q9BTF0 503 aaKnown RBP31.7■■■□□ 2.67
U2AF1-204ENST00000459639 FAM83GA6ND36 823 aa31.7■■■□□ 2.66
U2AF1-204ENST00000459639 CT47B1P0C2W7 299 aaPredicted RBP31.7■■■□□ 2.66
U2AF1-204ENST00000459639 GNAI1P63096 354 aa31.7■■■□□ 2.66
U2AF1-204ENST00000459639 TSR2Q969E8 191 aaKnown RBP31.7■■■□□ 2.66
U2AF1-204ENST00000459639 PRDM11Q9NQV5 511 aa31.7■■■□□ 2.66
U2AF1-204ENST00000459639 HTATSF1O43719 755 aaKnown RBP31.68■■■□□ 2.66
U2AF1-204ENST00000459639 ZNF853P0CG23 659 aa31.68■■■□□ 2.66
U2AF1-204ENST00000459639 CFAP44Q96MT7 982 aa31.66■■■□□ 2.66
U2AF1-204ENST00000459639 MAP3K5Q99683 1374 aa31.66■■■□□ 2.66
U2AF1-204ENST00000459639 DCTN1Q14203 1278 aa31.65■■■□□ 2.66
U2AF1-204ENST00000459639 PLEKHG2Q9H7P9 1386 aa31.65■■■□□ 2.66
U2AF1-204ENST00000459639 RTF1Q92541 710 aaKnown RBP31.64■■■□□ 2.66
U2AF1-204ENST00000459639 EXOSC9Q06265 439 aaKnown RBP31.64■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms