RNA–Protein interactions for RNA: ENST00000458085.6

CAPN13-203, Transcript of calpain 13, humanhuman

TSL 5

Gene CAPN13, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-203ENST00000458085 IL16Q14005 1332 aa21.22■□□□□ 0.99
CAPN13-203ENST00000458085 EXOSC9Q06265 439 aaKnown RBP21.21■□□□□ 0.99
CAPN13-203ENST00000458085 SULT6B1Q6IMI4 303 aa21.21■□□□□ 0.99
CAPN13-203ENST00000458085 ABTB2Q8N961 1025 aa21.21■□□□□ 0.99
CAPN13-203ENST00000458085 DLG5Q8TDM6 1919 aa21.21■□□□□ 0.99
CAPN13-203ENST00000458085 RGPD1P0DJD0 1748 aa21.19■□□□□ 0.98
CAPN13-203ENST00000458085 PROSER2Q86WR7 435 aaPredicted RBP21.19■□□□□ 0.98
CAPN13-203ENST00000458085 FRAT1Q92837 279 aaPredicted RBP21.19■□□□□ 0.98
CAPN13-203ENST00000458085 RBM19Q9Y4C8 960 aaKnown RBP21.19■□□□□ 0.98
CAPN13-203ENST00000458085 HSPA2P54652 639 aa21.18■□□□□ 0.98
CAPN13-203ENST00000458085 ORAI2Q96SN7 254 aa21.18■□□□□ 0.98
CAPN13-203ENST00000458085 SBNO1A3KN83 1393 aa21.18■□□□□ 0.98
CAPN13-203ENST00000458085 TNNQ9UQP3 1299 aa21.18■□□□□ 0.98
CAPN13-203ENST00000458085 PANK1Q8TE04 598 aa21.17■□□□□ 0.98
CAPN13-203ENST00000458085 USP54Q70EL1 1684 aa21.17■□□□□ 0.98
CAPN13-203ENST00000458085 FLT4P35916 1363 aa21.17■□□□□ 0.98
CAPN13-203ENST00000458085 AMPHP49418 695 aa21.16■□□□□ 0.98
CAPN13-203ENST00000458085 FAM83GA6ND36 823 aa21.16■□□□□ 0.98
CAPN13-203ENST00000458085 CANXP27824 592 aaKnown RBP21.16■□□□□ 0.98
CAPN13-203ENST00000458085 LAS1LQ9Y4W2 734 aaKnown RBP21.15■□□□□ 0.98
CAPN13-203ENST00000458085 PDE3AQ14432 1141 aa21.15■□□□□ 0.98
CAPN13-203ENST00000458085 STRCP1A6NGW2 1772 aa21.14■□□□□ 0.98
CAPN13-203ENST00000458085 PSME1Q06323 249 aa21.14■□□□□ 0.97
CAPN13-203ENST00000458085 XPCQ01831 940 aaPredicted RBP21.13■□□□□ 0.97
CAPN13-203ENST00000458085 DCTN1Q14203 1278 aa21.13■□□□□ 0.97
CAPN13-203ENST00000458085 COG6Q9Y2V7 657 aa21.13■□□□□ 0.97
CAPN13-203ENST00000458085 RLBP1P12271 317 aa21.13■□□□□ 0.97
CAPN13-203ENST00000458085 FOXO3O43524 673 aa21.12■□□□□ 0.97
CAPN13-203ENST00000458085 CT47B1P0C2W7 299 aaPredicted RBP21.12■□□□□ 0.97
CAPN13-203ENST00000458085 KDM4FA0A1W2PPD8 638 aa21.11■□□□□ 0.97
CAPN13-203ENST00000458085 HOXC9P31274 260 aa21.11■□□□□ 0.97
CAPN13-203ENST00000458085 SSH1Q8WYL5 1049 aa21.11■□□□□ 0.97
CAPN13-203ENST00000458085 ARHGEF10O15013 1369 aa21.11■□□□□ 0.97
CAPN13-203ENST00000458085 SKAP1Q86WV1 359 aa21.11■□□□□ 0.97
CAPN13-203ENST00000458085 EYA1Q99502 592 aa21.11■□□□□ 0.97
CAPN13-203ENST00000458085 KDM2BQ8NHM5 1336 aa21.1■□□□□ 0.97
CAPN13-203ENST00000458085 ZNF853P0CG23 659 aa21.09■□□□□ 0.97
CAPN13-203ENST00000458085 CLUAP1Q96AJ1 413 aa21.09■□□□□ 0.97
CAPN13-203ENST00000458085 C19orf44Q9H6X5 657 aa21.09■□□□□ 0.97
CAPN13-203ENST00000458085 SMC4Q9NTJ3 1288 aa21.09■□□□□ 0.97
CAPN13-203ENST00000458085 TMEM94Q12767 1356 aa21.08■□□□□ 0.97
CAPN13-203ENST00000458085 C1orf167Q5SNV9 1468 aa21.08■□□□□ 0.97
CAPN13-203ENST00000458085 IGSF1Q8N6C5 1336 aa21.08■□□□□ 0.97
CAPN13-203ENST00000458085 MBIPQ9NS73 344 aa21.08■□□□□ 0.96
CAPN13-203ENST00000458085 IFT57Q9NWB7 429 aa21.08■□□□□ 0.96
CAPN13-203ENST00000458085 LMOD3Q0VAK6 560 aa21.07■□□□□ 0.96
CAPN13-203ENST00000458085 NFAT5O94916 1531 aa21.07■□□□□ 0.96
CAPN13-203ENST00000458085 LTN1O94822 1766 aa21.07■□□□□ 0.96
CAPN13-203ENST00000458085 KDRP35968 1356 aa21.07■□□□□ 0.96
CAPN13-203ENST00000458085 GNAI1P63096 354 aa21.06■□□□□ 0.96
CAPN13-203ENST00000458085 CALD1Q05682 793 aaKnown RBP21.06■□□□□ 0.96
CAPN13-203ENST00000458085 TSPYL6Q8N831 410 aa21.06■□□□□ 0.96
CAPN13-203ENST00000458085 LTV1Q96GA3 475 aaPredicted RBP21.06■□□□□ 0.96
CAPN13-203ENST00000458085 KIF24Q5T7B8 1368 aa21.05■□□□□ 0.96
CAPN13-203ENST00000458085 PLEKHG5O94827 1062 aa21.05■□□□□ 0.96
CAPN13-203ENST00000458085 MCM10Q7L590 875 aa21.05■□□□□ 0.96
CAPN13-203ENST00000458085 ZKSCAN2Q63HK3 967 aa21.04■□□□□ 0.96
CAPN13-203ENST00000458085 CFAP44Q96MT7 982 aa21.04■□□□□ 0.96
CAPN13-203ENST00000458085 MTHFSDQ2M296 383 aaKnown RBP21.04■□□□□ 0.96
CAPN13-203ENST00000458085 TRPM3Q9HCF6 1732 aaPredicted RBP21.03■□□□□ 0.96
CAPN13-203ENST00000458085 ELL2O00472 640 aaPredicted RBP21.02■□□□□ 0.96
CAPN13-203ENST00000458085 VAMP4O75379 141 aa21.02■□□□□ 0.96
CAPN13-203ENST00000458085 TRIM27P14373 513 aa21.02■□□□□ 0.96
CAPN13-203ENST00000458085 CENPQQ7L2Z9 268 aaPredicted RBP21.02■□□□□ 0.96
CAPN13-203ENST00000458085 NOB1Q9ULX3 412 aaKnown RBP21.02■□□□□ 0.96
CAPN13-203ENST00000458085 LMTK3Q96Q04 1460 aa21.02■□□□□ 0.96
CAPN13-203ENST00000458085 KRT28Q7Z3Y7 464 aa21.02■□□□□ 0.95
CAPN13-203ENST00000458085 MST1RQ04912 1400 aa21.02■□□□□ 0.95
CAPN13-203ENST00000458085 RTL1A6NKG5 1358 aa21.01■□□□□ 0.95
CAPN13-203ENST00000458085 ZBTB7CA1YPR0 619 aa21.01■□□□□ 0.95
CAPN13-203ENST00000458085 IGHDP01880 384 aa21.01■□□□□ 0.95
CAPN13-203ENST00000458085 LMOD2Q6P5Q4 547 aa21.01■□□□□ 0.95
CAPN13-203ENST00000458085 C8orf58Q8NAV2 365 aa21.01■□□□□ 0.95
CAPN13-203ENST00000458085 ATF3P18847 181 aa21■□□□□ 0.95
CAPN13-203ENST00000458085 DZIP1LQ8IYY4 767 aaKnown RBP21■□□□□ 0.95
CAPN13-203ENST00000458085 IP6K1Q92551 441 aa21■□□□□ 0.95
CAPN13-203ENST00000458085 DDX17Q92841 729 aaKnown RBP21■□□□□ 0.95
CAPN13-203ENST00000458085 ALDH1L2Q3SY69 923 aa20.99■□□□□ 0.95
CAPN13-203ENST00000458085 USHBP1Q8N6Y0 703 aa20.99■□□□□ 0.95
CAPN13-203ENST00000458085 KIF1AQ12756 1690 aa20.99■□□□□ 0.95
CAPN13-203ENST00000458085 STRCQ7RTU9 1775 aa20.99■□□□□ 0.95
CAPN13-203ENST00000458085 GCP02774 474 aa20.98■□□□□ 0.95
CAPN13-203ENST00000458085 ATF7IPQ6VMQ6 1270 aa20.98■□□□□ 0.95
CAPN13-203ENST00000458085 KCNH5Q8NCM2 988 aa20.98■□□□□ 0.95
CAPN13-203ENST00000458085 TCERG1O14776 1098 aaKnown RBP20.98■□□□□ 0.95
CAPN13-203ENST00000458085 MVPQ14764 893 aaKnown RBP20.98■□□□□ 0.95
CAPN13-203ENST00000458085 FTSJ3Q8IY81 847 aaKnown RBP20.98■□□□□ 0.95
CAPN13-203ENST00000458085 SLIT3O75094 1523 aa20.97■□□□□ 0.95
CAPN13-203ENST00000458085 TWISTNBQ3B726 338 aaPredicted RBP20.97■□□□□ 0.95
CAPN13-203ENST00000458085 PCDHB15Q9Y5E8 787 aa20.97■□□□□ 0.95
CAPN13-203ENST00000458085 CRB1P82279 1406 aa20.97■□□□□ 0.95
CAPN13-203ENST00000458085 KRT24Q2M2I5 525 aa20.96■□□□□ 0.95
CAPN13-203ENST00000458085 DCCP43146 1447 aa20.96■□□□□ 0.95
CAPN13-203ENST00000458085 CHL1O00533 1208 aa20.95■□□□□ 0.95
CAPN13-203ENST00000458085 KIF16BQ96L93 1317 aa20.95■□□□□ 0.94
CAPN13-203ENST00000458085 XIRP1Q702N8 1843 aaKnown RBP20.95■□□□□ 0.94
CAPN13-203ENST00000458085 NCOA3Q9Y6Q9 1424 aa20.95■□□□□ 0.94
CAPN13-203ENST00000458085 MRPL50Q8N5N7 158 aaKnown RBP20.95■□□□□ 0.94
CAPN13-203ENST00000458085 USP19O94966 1318 aa20.95■□□□□ 0.94
CAPN13-203ENST00000458085 RGPD2P0DJD1 1756 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms