RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 MCTP1Q6DN14 999 aa20.02■□□□□ 0.8
LSS-205ENST00000457828 ADCY10Q96PN6 1610 aa20.02■□□□□ 0.8
LSS-205ENST00000457828 C9orf78Q9NZ63 289 aaPredicted RBP20.02■□□□□ 0.8
LSS-205ENST00000457828 MAST1Q9Y2H9 1570 aa20.02■□□□□ 0.8
LSS-205ENST00000457828 LMTK3Q96Q04 1460 aa20.02■□□□□ 0.79
LSS-205ENST00000457828 MCCP23508 829 aa20.02■□□□□ 0.79
LSS-205ENST00000457828 CABP4P57796 275 aa20.02■□□□□ 0.79
LSS-205ENST00000457828 TMEM57Q8N5G2 664 aa20.01■□□□□ 0.79
LSS-205ENST00000457828 CABLES1Q8TDN4 633 aa20.01■□□□□ 0.79
LSS-205ENST00000457828 SSH1Q8WYL5 1049 aa20.01■□□□□ 0.79
LSS-205ENST00000457828 DDX58O95786 925 aaKnown RBP20.01■□□□□ 0.79
LSS-205ENST00000457828 COL17A1Q9UMD9 1497 aaPredicted RBP20■□□□□ 0.79
LSS-205ENST00000457828 TRIM6-TRIM34B2RNG4 842 aa20■□□□□ 0.79
LSS-205ENST00000457828 PANK2Q9BZ23 570 aa20■□□□□ 0.79
LSS-205ENST00000457828 YTHDC2Q9H6S0 1430 aaKnown RBP20■□□□□ 0.79
LSS-205ENST00000457828 TTC21BQ7Z4L5 1316 aa19.99■□□□□ 0.79
LSS-205ENST00000457828 NASPP49321 788 aaPredicted RBP19.99■□□□□ 0.79
LSS-205ENST00000457828 FCHSD2O94868 740 aa19.99■□□□□ 0.79
LSS-205ENST00000457828 PREX2Q70Z35 1606 aa19.98■□□□□ 0.79
LSS-205ENST00000457828 KDM5CP41229 1560 aa19.98■□□□□ 0.79
LSS-205ENST00000457828 ORAI2Q96SN7 254 aa19.97■□□□□ 0.79
LSS-205ENST00000457828 FYB1O15117 783 aa19.97■□□□□ 0.79
LSS-205ENST00000457828 ZRANB1Q9UGI0 708 aa19.97■□□□□ 0.79
LSS-205ENST00000457828 ESPNB1AK53 854 aa19.97■□□□□ 0.79
LSS-205ENST00000457828 BLMP54132 1417 aaPredicted RBP19.96■□□□□ 0.79
LSS-205ENST00000457828 PPIP5K1Q6PFW1 1433 aa19.96■□□□□ 0.79
LSS-205ENST00000457828 TRIM27P14373 513 aa19.96■□□□□ 0.79
LSS-205ENST00000457828 RIC3Q7Z5B4 369 aa19.96■□□□□ 0.79
LSS-205ENST00000457828 TMPOP42166 694 aaKnown RBP19.96■□□□□ 0.79
LSS-205ENST00000457828 CHD1LQ86WJ1 897 aa19.96■□□□□ 0.79
LSS-205ENST00000457828 API5Q9BZZ5 524 aaKnown RBP19.96■□□□□ 0.79
LSS-205ENST00000457828 XRCC6P12956 609 aaKnown RBP eCLIP19.95■□□□□ 0.786e-7■■■■□ 25.5
LSS-205ENST00000457828 SF3B2Q13435 895 aaKnown RBP19.95■□□□□ 0.78
LSS-205ENST00000457828 BCORL1Q5H9F3 1711 aa19.95■□□□□ 0.78
LSS-205ENST00000457828 CAVIN1Q6NZI2 390 aaKnown RBP19.95■□□□□ 0.78
LSS-205ENST00000457828 CARD14Q9BXL6 1004 aa19.95■□□□□ 0.78
LSS-205ENST00000457828 G3V3G9 751 aa19.95■□□□□ 0.78
LSS-205ENST00000457828 DCAF8Q5TAQ9 597 aa19.95■□□□□ 0.78
LSS-205ENST00000457828 ZMYM4Q5VZL5 1548 aa19.95■□□□□ 0.78
LSS-205ENST00000457828 FGD1P98174 961 aa19.94■□□□□ 0.78
LSS-205ENST00000457828 KLHL34Q8N239 644 aa19.94■□□□□ 0.78
LSS-205ENST00000457828 THUMPD2Q9BTF0 503 aaKnown RBP19.94■□□□□ 0.78
LSS-205ENST00000457828 TAOK2Q9UL54 1235 aa19.94■□□□□ 0.78
LSS-205ENST00000457828 CDC45O75419 566 aa19.94■□□□□ 0.78
LSS-205ENST00000457828 FAM13BQ9NYF5 915 aa19.94■□□□□ 0.78
LSS-205ENST00000457828 ASXL1Q8IXJ9 1541 aa19.94■□□□□ 0.78
LSS-205ENST00000457828 HECW2Q9P2P5 1572 aa19.93■□□□□ 0.78
LSS-205ENST00000457828 FAM177BA6PVY3 158 aa19.93■□□□□ 0.78
LSS-205ENST00000457828 HSP90AB2PQ58FF8 381 aa19.93■□□□□ 0.78
LSS-205ENST00000457828 RILPL2Q969X0 211 aa19.93■□□□□ 0.78
LSS-205ENST00000457828 DCTN1Q14203 1278 aa19.92■□□□□ 0.78
LSS-205ENST00000457828 TWISTNBQ3B726 338 aaPredicted RBP19.92■□□□□ 0.78
LSS-205ENST00000457828 HDGFL1Q5TGJ6 251 aa19.91■□□□□ 0.78
LSS-205ENST00000457828 K7ELQ4 463 aaPredicted RBP19.91■□□□□ 0.78
LSS-205ENST00000457828 KIAA2012Q0VF49 1180 aa19.9■□□□□ 0.78
LSS-205ENST00000457828 RNF214Q8ND24 703 aa19.9■□□□□ 0.78
LSS-205ENST00000457828 PTCD1O75127 700 aaKnown RBP19.9■□□□□ 0.78
LSS-205ENST00000457828 NFE2L2Q16236 605 aa19.9■□□□□ 0.78
LSS-205ENST00000457828 MCM10Q7L590 875 aa19.9■□□□□ 0.78
LSS-205ENST00000457828 C8orf37Q96NL8 207 aa19.9■□□□□ 0.78
LSS-205ENST00000457828 TTC21AQ8NDW8 1320 aa19.9■□□□□ 0.78
LSS-205ENST00000457828 NUCB2P80303 420 aa19.9■□□□□ 0.78
LSS-205ENST00000457828 CT47B1P0C2W7 299 aaPredicted RBP19.9■□□□□ 0.78
LSS-205ENST00000457828 ANKRD24Q8TF21 1146 aa19.9■□□□□ 0.78
LSS-205ENST00000457828 MIS18AQ9NYP9 233 aa19.9■□□□□ 0.78
LSS-205ENST00000457828 TNPO1Q92973 898 aaKnown RBP19.89■□□□□ 0.78
LSS-205ENST00000457828 SYAP1Q96A49 352 aaPredicted RBP19.89■□□□□ 0.78
LSS-205ENST00000457828 CCDC30Q5VVM6 783 aa19.89■□□□□ 0.77
LSS-205ENST00000457828 GNAT3A8MTJ3 354 aa19.88■□□□□ 0.77
LSS-205ENST00000457828 LRRC59Q96AG4 307 aaKnown RBP19.88■□□□□ 0.77
LSS-205ENST00000457828 NAP1L2Q9ULW6 460 aaPredicted RBP19.88■□□□□ 0.77
LSS-205ENST00000457828 ANKRD36BQ8N2N9 1353 aa19.88■□□□□ 0.77
LSS-205ENST00000457828 REC8O95072 547 aa19.88■□□□□ 0.77
LSS-205ENST00000457828 INTS3Q68E01 1043 aaKnown RBP19.88■□□□□ 0.77
LSS-205ENST00000457828 SLAIN2Q9P270 581 aa19.88■□□□□ 0.77
LSS-205ENST00000457828 R3HCC1Q9Y3T6 440 aaKnown RBP19.88■□□□□ 0.77
LSS-205ENST00000457828 EXOC5O00471 708 aa19.88■□□□□ 0.77
LSS-205ENST00000457828 DDX17Q92841 729 aaKnown RBP19.88■□□□□ 0.77
LSS-205ENST00000457828 BTBD11A6QL63 1104 aa19.87■□□□□ 0.77
LSS-205ENST00000457828 PRPF40AO75400 957 aaKnown RBP19.87■□□□□ 0.77
LSS-205ENST00000457828 ZNF428Q96B54 188 aa19.87■□□□□ 0.77
LSS-205ENST00000457828 GCC1Q96CN9 775 aa19.87■□□□□ 0.77
LSS-205ENST00000457828 MPRIPQ6WCQ1 1025 aa19.87■□□□□ 0.77
LSS-205ENST00000457828 RRAGDQ9NQL2 400 aaPredicted RBP19.87■□□□□ 0.77
LSS-205ENST00000457828 PIK3C2GO75747 1445 aa19.87■□□□□ 0.77
LSS-205ENST00000457828 KIAA1211Q6ZU35 1233 aa19.86■□□□□ 0.77
LSS-205ENST00000457828 GCP02774 474 aa19.86■□□□□ 0.77
LSS-205ENST00000457828 SLC4A2P04920 1241 aa19.85■□□□□ 0.77
LSS-205ENST00000457828 GOLGA6L4A6NEF3 574 aa19.85■□□□□ 0.77
LSS-205ENST00000457828 ANO2Q9NQ90 1003 aa19.85■□□□□ 0.77
LSS-205ENST00000457828 GPATCH3Q96I76 525 aa19.84■□□□□ 0.77
LSS-205ENST00000457828 CDC42BPAQ5VT25 1732 aa19.84■□□□□ 0.77
LSS-205ENST00000457828 KDM5DQ9BY66 1539 aa19.84■□□□□ 0.77
LSS-205ENST00000457828 AMOTQ4VCS5 1084 aa19.84■□□□□ 0.77
LSS-205ENST00000457828 MYL6BP14649 208 aa19.84■□□□□ 0.77
LSS-205ENST00000457828 SSFA2P28290 1259 aa19.84■□□□□ 0.77
LSS-205ENST00000457828 CIZ1Q9ULV3 898 aaPredicted RBP19.84■□□□□ 0.77
LSS-205ENST00000457828 ARAP3Q8WWN8 1544 aa19.84■□□□□ 0.77
LSS-205ENST00000457828 RBM10P98175 930 aaKnown RBP19.83■□□□□ 0.77
LSS-205ENST00000457828 KAT6BQ8WYB5 2073 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms