RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 TNNQ9UQP3 1299 aa4.14□□□□□ -1.75
HMGN1P18-201ENST00000457642 MYO5BQ9ULV0 1848 aa4.14□□□□□ -1.75
HMGN1P18-201ENST00000457642 PIK3R4Q99570 1358 aa4.14□□□□□ -1.75
HMGN1P18-201ENST00000457642 NCOA3Q9Y6Q9 1424 aa4.13□□□□□ -1.75
HMGN1P18-201ENST00000457642 ARHGEF40Q8TER5 1519 aa4.13□□□□□ -1.75
HMGN1P18-201ENST00000457642 K7ELQ4 463 aaPredicted RBP4.13□□□□□ -1.75
HMGN1P18-201ENST00000457642 HMMRO75330 724 aa4.13□□□□□ -1.75
HMGN1P18-201ENST00000457642 RABEP1Q15276 862 aa4.13□□□□□ -1.75
HMGN1P18-201ENST00000457642 ANKRD45Q5TZF3 282 aa4.13□□□□□ -1.75
HMGN1P18-201ENST00000457642 COG3Q96JB2 828 aa4.13□□□□□ -1.75
HMGN1P18-201ENST00000457642 ANO8Q9HCE9 1232 aaPredicted RBP4.13□□□□□ -1.75
HMGN1P18-201ENST00000457642 ABCC4O15439 1325 aa4.13□□□□□ -1.75
HMGN1P18-201ENST00000457642 AATKQ6ZMQ8 1374 aa4.13□□□□□ -1.75
HMGN1P18-201ENST00000457642 RIMS2Q9UQ26 1411 aa4.12□□□□□ -1.75
HMGN1P18-201ENST00000457642 ITSN1Q15811 1721 aa4.12□□□□□ -1.75
HMGN1P18-201ENST00000457642 CD163L1Q9NR16 1453 aa4.12□□□□□ -1.75
HMGN1P18-201ENST00000457642 FSD2A1L4K1 749 aa4.12□□□□□ -1.75
HMGN1P18-201ENST00000457642 ST18O60284 1047 aa4.12□□□□□ -1.75
HMGN1P18-201ENST00000457642 REC8O95072 547 aa4.12□□□□□ -1.75
HMGN1P18-201ENST00000457642 RAPGEF3O95398 923 aa4.12□□□□□ -1.75
HMGN1P18-201ENST00000457642 MCCP23508 829 aa4.12□□□□□ -1.75
HMGN1P18-201ENST00000457642 NUCB2P80303 420 aa4.12□□□□□ -1.75
HMGN1P18-201ENST00000457642 RAB3GAP1Q15042 981 aa4.12□□□□□ -1.75
HMGN1P18-201ENST00000457642 TWISTNBQ3B726 338 aaPredicted RBP4.12□□□□□ -1.75
HMGN1P18-201ENST00000457642 INTS3Q68E01 1043 aaKnown RBP4.12□□□□□ -1.75
HMGN1P18-201ENST00000457642 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.12□□□□□ -1.75
HMGN1P18-201ENST00000457642 MRPL50Q8N5N7 158 aaKnown RBP4.12□□□□□ -1.75
HMGN1P18-201ENST00000457642 ARXQ96QS3 562 aa4.12□□□□□ -1.75
HMGN1P18-201ENST00000457642 GZF1Q9H116 711 aaPredicted RBP4.12□□□□□ -1.75
HMGN1P18-201ENST00000457642 ESF1Q9H501 851 aaKnown RBP4.12□□□□□ -1.75
HMGN1P18-201ENST00000457642 GRPEL1Q9HAV7 217 aa4.12□□□□□ -1.75
HMGN1P18-201ENST00000457642 CABP1Q9NZU7 370 aa4.12□□□□□ -1.75
HMGN1P18-201ENST00000457642 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.12□□□□□ -1.75
HMGN1P18-201ENST00000457642 KNDC1Q76NI1 1749 aa4.12□□□□□ -1.75
HMGN1P18-201ENST00000457642 CPSF1Q10570 1443 aaKnown RBP4.12□□□□□ -1.75
HMGN1P18-201ENST00000457642 AGLP35573 1532 aa4.11□□□□□ -1.75
HMGN1P18-201ENST00000457642 VAMP4O75379 141 aa4.11□□□□□ -1.75
HMGN1P18-201ENST00000457642 XRCC6P12956 609 aaKnown RBP eCLIP4.11□□□□□ -1.75
HMGN1P18-201ENST00000457642 CLCN1P35523 988 aa4.11□□□□□ -1.75
HMGN1P18-201ENST00000457642 CCDC173Q0VFZ6 552 aa4.11□□□□□ -1.75
HMGN1P18-201ENST00000457642 TBC1D9Q6ZT07 1266 aa4.11□□□□□ -1.75
HMGN1P18-201ENST00000457642 RPAP2Q8IXW5 612 aaPredicted RBP4.11□□□□□ -1.75
HMGN1P18-201ENST00000457642 TNPO1Q92973 898 aaKnown RBP4.11□□□□□ -1.75
HMGN1P18-201ENST00000457642 NAP1L5Q96NT1 182 aaPredicted RBP4.11□□□□□ -1.75
HMGN1P18-201ENST00000457642 ZNF692Q9BU19 519 aaPredicted RBP4.11□□□□□ -1.75
HMGN1P18-201ENST00000457642 CWC22Q9HCG8 908 aaKnown RBP4.11□□□□□ -1.75
HMGN1P18-201ENST00000457642 MBIPQ9NS73 344 aa4.11□□□□□ -1.75
HMGN1P18-201ENST00000457642 POLKQ9UBT6 870 aa4.11□□□□□ -1.75
HMGN1P18-201ENST00000457642 PTPRCP08575 1304 aa4.11□□□□□ -1.75
HMGN1P18-201ENST00000457642 MAP2P11137 1827 aaKnown RBP4.11□□□□□ -1.75
HMGN1P18-201ENST00000457642 IBTKQ9P2D0 1353 aaPredicted RBP4.11□□□□□ -1.75
HMGN1P18-201ENST00000457642 SPATA31D1Q6ZQQ2 1576 aa4.1□□□□□ -1.75
HMGN1P18-201ENST00000457642 NRKQ7Z2Y5 1582 aa4.1□□□□□ -1.75
HMGN1P18-201ENST00000457642 RIMBP3CA6NJZ7 1639 aa4.1□□□□□ -1.75
HMGN1P18-201ENST00000457642 RIMBP3BA6NNM3 1639 aa4.1□□□□□ -1.75
HMGN1P18-201ENST00000457642 RIMBP3Q9UFD9 1639 aa4.1□□□□□ -1.75
HMGN1P18-201ENST00000457642 MON2Q7Z3U7 1717 aa4.1□□□□□ -1.75
HMGN1P18-201ENST00000457642 WASLO00401 505 aaPredicted RBP4.1□□□□□ -1.75
HMGN1P18-201ENST00000457642 ZBTB7BO15156 539 aaPredicted RBP4.1□□□□□ -1.75
HMGN1P18-201ENST00000457642 HMOX1P09601 288 aa4.1□□□□□ -1.75
HMGN1P18-201ENST00000457642 ZNF853P0CG23 659 aa4.1□□□□□ -1.75
HMGN1P18-201ENST00000457642 IL13P35225 146 aa4.1□□□□□ -1.75
HMGN1P18-201ENST00000457642 MCM2P49736 904 aa4.1□□□□□ -1.75
HMGN1P18-201ENST00000457642 KLHL40Q2TBA0 621 aa4.1□□□□□ -1.75
HMGN1P18-201ENST00000457642 TTC22Q5TAA0 569 aa4.1□□□□□ -1.75
HMGN1P18-201ENST00000457642 SIRT1Q96EB6 747 aa4.1□□□□□ -1.75
HMGN1P18-201ENST00000457642 DDX49Q9Y6V7 483 aaKnown RBP4.1□□□□□ -1.75
HMGN1P18-201ENST00000457642 TTC21BQ7Z4L5 1316 aa4.1□□□□□ -1.75
HMGN1P18-201ENST00000457642 KIAA0232Q92628 1395 aa4.1□□□□□ -1.75
HMGN1P18-201ENST00000457642 YEATS2Q9ULM3 1422 aa4.1□□□□□ -1.75
HMGN1P18-201ENST00000457642 A2ML1A8K2U0 1454 aa4.1□□□□□ -1.75
HMGN1P18-201ENST00000457642 CPS1P31327 1500 aa4.1□□□□□ -1.75
HMGN1P18-201ENST00000457642 AKAP12Q02952 1782 aa4.09□□□□□ -1.75
HMGN1P18-201ENST00000457642 ESPNB1AK53 854 aa4.09□□□□□ -1.75
HMGN1P18-201ENST00000457642 ERC2O15083 957 aa4.09□□□□□ -1.75
HMGN1P18-201ENST00000457642 TPM2P07951 284 aa4.09□□□□□ -1.75
HMGN1P18-201ENST00000457642 NCLP19338 710 aaKnown RBP4.09□□□□□ -1.75
HMGN1P18-201ENST00000457642 MSNP26038 577 aaKnown RBP4.09□□□□□ -1.75
HMGN1P18-201ENST00000457642 DDIT3P35638 169 aa4.09□□□□□ -1.75
HMGN1P18-201ENST00000457642 NASPP49321 788 aaPredicted RBP4.09□□□□□ -1.75
HMGN1P18-201ENST00000457642 CCT4P50991 539 aaKnown RBP4.09□□□□□ -1.75
HMGN1P18-201ENST00000457642 CLEC17AQ6ZS10 378 aa4.09□□□□□ -1.75
HMGN1P18-201ENST00000457642 ANKRD44Q8N8A2 993 aa4.09□□□□□ -1.75
HMGN1P18-201ENST00000457642 RTF1Q92541 710 aaKnown RBP4.09□□□□□ -1.75
HMGN1P18-201ENST00000457642 SYAP1Q96A49 352 aaPredicted RBP4.09□□□□□ -1.75
HMGN1P18-201ENST00000457642 NUDT16Q96DE0 195 aaKnown RBP4.09□□□□□ -1.75
HMGN1P18-201ENST00000457642 STK31Q9BXU1 1019 aa4.09□□□□□ -1.75
HMGN1P18-201ENST00000457642 CHMP4AQ9BY43 222 aa4.09□□□□□ -1.75
HMGN1P18-201ENST00000457642 DCTPP1Q9H773 170 aa4.09□□□□□ -1.75
HMGN1P18-201ENST00000457642 C1orf115Q9H7X2 142 aa4.09□□□□□ -1.75
HMGN1P18-201ENST00000457642 EMILIN1Q9Y6C2 1016 aa4.09□□□□□ -1.75
HMGN1P18-201ENST00000457642 CCDC61Q9Y6R9 512 aa4.09□□□□□ -1.75
HMGN1P18-201ENST00000457642 C3P01024 1663 aa4.09□□□□□ -1.76
HMGN1P18-201ENST00000457642 SETD1AO15047 1707 aaKnown RBP4.09□□□□□ -1.76
HMGN1P18-201ENST00000457642 DLG5Q8TDM6 1919 aa4.09□□□□□ -1.76
HMGN1P18-201ENST00000457642 ELL2O00472 640 aaPredicted RBP4.08□□□□□ -1.76
HMGN1P18-201ENST00000457642 ARHGEF10O15013 1369 aa4.08□□□□□ -1.76
HMGN1P18-201ENST00000457642 TECPR2O15040 1411 aa4.08□□□□□ -1.76
HMGN1P18-201ENST00000457642 PHF14O94880 888 aa4.08□□□□□ -1.76
HMGN1P18-201ENST00000457642 BAG4O95429 457 aaKnown RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms