RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 ACEP12821 1306 aa21.37■■□□□ 1.01
CCDC43-202ENST00000457422 NUTM2FA1L443 756 aa21.36■■□□□ 1.01
CCDC43-202ENST00000457422 CALD1Q05682 793 aaKnown RBP21.36■■□□□ 1.01
CCDC43-202ENST00000457422 PCDHB15Q9Y5E8 787 aa21.36■■□□□ 1.01
CCDC43-202ENST00000457422 RIMS1Q86UR5 1692 aaKnown RBP21.36■■□□□ 1.01
CCDC43-202ENST00000457422 XRN1Q8IZH2 1706 aaKnown RBP21.36■■□□□ 1.01
CCDC43-202ENST00000457422 ZNF428Q96B54 188 aa21.36■■□□□ 1.01
CCDC43-202ENST00000457422 AMOTL2Q9Y2J4 779 aa21.36■■□□□ 1.01
CCDC43-202ENST00000457422 SSH2Q76I76 1423 aa21.35■■□□□ 1.01
CCDC43-202ENST00000457422 ALDH1L2Q3SY69 923 aa21.35■■□□□ 1.01
CCDC43-202ENST00000457422 FTSJ3Q8IY81 847 aaKnown RBP21.35■■□□□ 1.01
CCDC43-202ENST00000457422 THEMISQ8N1K5 641 aaPredicted RBP21.35■■□□□ 1.01
CCDC43-202ENST00000457422 KIF16BQ96L93 1317 aa21.34■■□□□ 1.01
CCDC43-202ENST00000457422 TRIM27P14373 513 aa21.34■■□□□ 1.01
CCDC43-202ENST00000457422 ATF7IPQ6VMQ6 1270 aa21.33■■□□□ 1.01
CCDC43-202ENST00000457422 BRPF1P55201 1214 aaPredicted RBP21.33■■□□□ 1
CCDC43-202ENST00000457422 USP31Q70CQ4 1352 aa21.33■■□□□ 1
CCDC43-202ENST00000457422 DDRGK1Q96HY6 314 aa21.32■■□□□ 1
CCDC43-202ENST00000457422 RWDD1Q9H446 243 aaPredicted RBP21.32■■□□□ 1
CCDC43-202ENST00000457422 IFT57Q9NWB7 429 aa21.32■■□□□ 1
CCDC43-202ENST00000457422 LMOD3Q0VAK6 560 aa21.31■■□□□ 1
CCDC43-202ENST00000457422 THUMPD2Q9BTF0 503 aaKnown RBP21.31■■□□□ 1
CCDC43-202ENST00000457422 RGPD1P0DJD0 1748 aa21.3■■□□□ 1
CCDC43-202ENST00000457422 DDX19BQ9UMR2 479 aa21.3■■□□□ 1
CCDC43-202ENST00000457422 LAS1LQ9Y4W2 734 aaKnown RBP21.3■■□□□ 1
CCDC43-202ENST00000457422 PEAK1Q9H792 1746 aa21.3■■□□□ 1
CCDC43-202ENST00000457422 IPO8O15397 1037 aaKnown RBP21.3■■□□□ 1
CCDC43-202ENST00000457422 ZNF853P0CG23 659 aa21.3■■□□□ 1
CCDC43-202ENST00000457422 GNAI1P63096 354 aa21.3■■□□□ 1
CCDC43-202ENST00000457422 NOB1Q9ULX3 412 aaKnown RBP21.3■■□□□ 1
CCDC43-202ENST00000457422 TTC21AQ8NDW8 1320 aa21.29■■□□□ 1
CCDC43-202ENST00000457422 CEP170BQ9Y4F5 1589 aaPredicted RBP21.28■■□□□ 1
CCDC43-202ENST00000457422 TRHP20396 242 aaPredicted RBP21.28■■□□□ 1
CCDC43-202ENST00000457422 RGPD8O14715 1765 aaPredicted RBP21.28■■□□□ 1
CCDC43-202ENST00000457422 PIK3R4Q99570 1358 aa21.27■■□□□ 1
CCDC43-202ENST00000457422 EIF4A2Q14240 407 aaKnown RBP21.27■□□□□ 0.99
CCDC43-202ENST00000457422 FMN2Q9NZ56 1722 aa21.26■□□□□ 0.99
CCDC43-202ENST00000457422 ANKARQ7Z5J8 1434 aa21.25■□□□□ 0.99
CCDC43-202ENST00000457422 ITPRIPQ8IWB1 547 aa21.25■□□□□ 0.99
CCDC43-202ENST00000457422 VAMP4O75379 141 aa21.24■□□□□ 0.99
CCDC43-202ENST00000457422 HDAC1Q13547 482 aaPredicted RBP21.24■□□□□ 0.99
CCDC43-202ENST00000457422 CFAP44Q96MT7 982 aa21.24■□□□□ 0.99
CCDC43-202ENST00000457422 AEBP1Q8IUX7 1158 aa21.24■□□□□ 0.99
CCDC43-202ENST00000457422 TMEM57Q8N5G2 664 aa21.24■□□□□ 0.99
CCDC43-202ENST00000457422 PDZRN3Q9UPQ7 1066 aa21.24■□□□□ 0.99
CCDC43-202ENST00000457422 MBIPQ9NS73 344 aa21.23■□□□□ 0.99
CCDC43-202ENST00000457422 ARHGAP45Q92619 1136 aa21.22■□□□□ 0.99
CCDC43-202ENST00000457422 PIK3C2AO00443 1686 aa21.22■□□□□ 0.99
CCDC43-202ENST00000457422 USP54Q70EL1 1684 aa21.22■□□□□ 0.99
CCDC43-202ENST00000457422 FAM83GA6ND36 823 aa21.21■□□□□ 0.99
CCDC43-202ENST00000457422 SULT6B1Q6IMI4 303 aa21.21■□□□□ 0.99
CCDC43-202ENST00000457422 ZBTB40Q9NUA8 1239 aa21.21■□□□□ 0.99
CCDC43-202ENST00000457422 ZNF142P52746 1687 aaPredicted RBP21.21■□□□□ 0.99
CCDC43-202ENST00000457422 MRPL50Q8N5N7 158 aaKnown RBP21.2■□□□□ 0.99
CCDC43-202ENST00000457422 TSPYL6Q8N831 410 aa21.2■□□□□ 0.99
CCDC43-202ENST00000457422 SOX12O15370 315 aa21.2■□□□□ 0.98
CCDC43-202ENST00000457422 HSP90AB2PQ58FF8 381 aa21.2■□□□□ 0.98
CCDC43-202ENST00000457422 NGDNQ8NEJ9 315 aaKnown RBP21.2■□□□□ 0.98
CCDC43-202ENST00000457422 KCNA6P17658 529 aa21.19■□□□□ 0.98
CCDC43-202ENST00000457422 ARHGEF10O15013 1369 aa21.19■□□□□ 0.98
CCDC43-202ENST00000457422 SBNO1A3KN83 1393 aa21.18■□□□□ 0.98
CCDC43-202ENST00000457422 DCTN1Q14203 1278 aa21.18■□□□□ 0.98
CCDC43-202ENST00000457422 CHD2O14647 1828 aaKnown RBP21.18■□□□□ 0.98
CCDC43-202ENST00000457422 FLT4P35916 1363 aa21.17■□□□□ 0.98
CCDC43-202ENST00000457422 NBR1Q14596 966 aa21.17■□□□□ 0.98
CCDC43-202ENST00000457422 MAP3K19Q56UN5 1328 aa21.17■□□□□ 0.98
CCDC43-202ENST00000457422 MARF1Q9Y4F3 1742 aaKnown RBP21.16■□□□□ 0.98
CCDC43-202ENST00000457422 TWISTNBQ3B726 338 aaPredicted RBP21.16■□□□□ 0.98
CCDC43-202ENST00000457422 SMC5Q8IY18 1101 aa21.16■□□□□ 0.98
CCDC43-202ENST00000457422 CHMP4BQ9H444 224 aaKnown RBP21.16■□□□□ 0.98
CCDC43-202ENST00000457422 USP19O94966 1318 aa21.15■□□□□ 0.98
CCDC43-202ENST00000457422 ELL2O00472 640 aaPredicted RBP21.15■□□□□ 0.98
CCDC43-202ENST00000457422 C8orf58Q8NAV2 365 aa21.15■□□□□ 0.98
CCDC43-202ENST00000457422 KDRP35968 1356 aa21.14■□□□□ 0.97
CCDC43-202ENST00000457422 ABCC4O15439 1325 aa21.14■□□□□ 0.97
CCDC43-202ENST00000457422 KIF24Q5T7B8 1368 aa21.13■□□□□ 0.97
CCDC43-202ENST00000457422 KIAA0232Q92628 1395 aa21.11■□□□□ 0.97
CCDC43-202ENST00000457422 ADAMTSL3P82987 1691 aa21.11■□□□□ 0.97
CCDC43-202ENST00000457422 CHL1O00533 1208 aa21.11■□□□□ 0.97
CCDC43-202ENST00000457422 HAP1P54257 671 aaPredicted RBP21.11■□□□□ 0.97
CCDC43-202ENST00000457422 ZBTB7BO15156 539 aaPredicted RBP21.1■□□□□ 0.97
CCDC43-202ENST00000457422 SEC24BO95487 1268 aa21.1■□□□□ 0.97
CCDC43-202ENST00000457422 IGSF1Q8N6C5 1336 aa21.1■□□□□ 0.97
CCDC43-202ENST00000457422 MCM10Q7L590 875 aa21.09■□□□□ 0.97
CCDC43-202ENST00000457422 API5Q9BZZ5 524 aaKnown RBP21.09■□□□□ 0.97
CCDC43-202ENST00000457422 CRB1P82279 1406 aa21.09■□□□□ 0.97
CCDC43-202ENST00000457422 AMPHP49418 695 aa21.08■□□□□ 0.97
CCDC43-202ENST00000457422 ANKLE2Q86XL3 938 aa21.08■□□□□ 0.97
CCDC43-202ENST00000457422 NLRP6P59044 892 aa21.08■□□□□ 0.96
CCDC43-202ENST00000457422 SETD1BQ9UPS6 1966 aaKnown RBP21.08■□□□□ 0.96
CCDC43-202ENST00000457422 SLC4A3P48751 1232 aa21.07■□□□□ 0.96
CCDC43-202ENST00000457422 DAXXQ9UER7 740 aaPredicted RBP21.06■□□□□ 0.96
CCDC43-202ENST00000457422 NUCB1Q02818 461 aa21.05■□□□□ 0.96
CCDC43-202ENST00000457422 NUTM2GQ5VZR2 741 aa21.05■□□□□ 0.96
CCDC43-202ENST00000457422 RTL5Q5HYW3 569 aaPredicted RBP21.05■□□□□ 0.96
CCDC43-202ENST00000457422 EYA1Q99502 592 aa21.05■□□□□ 0.96
CCDC43-202ENST00000457422 USP35Q9P2H5 1018 aa21.05■□□□□ 0.96
CCDC43-202ENST00000457422 LRRC37A3O60309 1634 aa21.04■□□□□ 0.96
CCDC43-202ENST00000457422 KRT24Q2M2I5 525 aa21.04■□□□□ 0.96
CCDC43-202ENST00000457422 NWD1Q149M9 1564 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms