RNA–Protein interactions for RNA: ENST00000456522.1

PTCHD1-202, Transcript of patched domain containing 1, humanhuman

TSL 1 (best)

Gene PTCHD1, Length 736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-202ENST00000456522 SRPK2P78362 688 aaKnown RBP13.04□□□□□ -0.32
PTCHD1-202ENST00000456522 CDK19Q9BWU1 502 aa13.04□□□□□ -0.32
PTCHD1-202ENST00000456522 KIF7Q2M1P5 1343 aa13.04□□□□□ -0.32
PTCHD1-202ENST00000456522 XIRP1Q702N8 1843 aaKnown RBP13.04□□□□□ -0.32
PTCHD1-202ENST00000456522 LRRC7Q96NW7 1537 aa13.03□□□□□ -0.32
PTCHD1-202ENST00000456522 WASLO00401 505 aaPredicted RBP13.03□□□□□ -0.32
PTCHD1-202ENST00000456522 MLLT3P42568 568 aaPredicted RBP13.03□□□□□ -0.32
PTCHD1-202ENST00000456522 PLPP6Q8IY26 295 aa13.03□□□□□ -0.32
PTCHD1-202ENST00000456522 PELP1Q8IZL8 1130 aaKnown RBP13.03□□□□□ -0.32
PTCHD1-202ENST00000456522 WASHC2AQ641Q2 1341 aa13.03□□□□□ -0.32
PTCHD1-202ENST00000456522 CCDC7Q96M83 1385 aa13.03□□□□□ -0.32
PTCHD1-202ENST00000456522 ADGRL3Q9HAR2 1447 aa13.03□□□□□ -0.32
PTCHD1-202ENST00000456522 NUTM2FA1L443 756 aa13.02□□□□□ -0.33
PTCHD1-202ENST00000456522 TMEM132AQ24JP5 1023 aa13.02□□□□□ -0.33
PTCHD1-202ENST00000456522 CDCA8Q53HL2 280 aa13.02□□□□□ -0.33
PTCHD1-202ENST00000456522 ADGRB2O60241 1585 aa13.02□□□□□ -0.33
PTCHD1-202ENST00000456522 G3V3G9 751 aa13.01□□□□□ -0.33
PTCHD1-202ENST00000456522 LTBP4Q8N2S1 1624 aa13.01□□□□□ -0.33
PTCHD1-202ENST00000456522 C19orf44Q9H6X5 657 aa13□□□□□ -0.33
PTCHD1-202ENST00000456522 NCOA3Q9Y6Q9 1424 aa12.99□□□□□ -0.33
PTCHD1-202ENST00000456522 MSH6P52701 1360 aa12.99□□□□□ -0.33
PTCHD1-202ENST00000456522 ATF3P18847 181 aa12.99□□□□□ -0.33
PTCHD1-202ENST00000456522 TMEM92Q6UXU6 159 aa12.99□□□□□ -0.33
PTCHD1-202ENST00000456522 BARGINQ6ZT62 677 aa12.99□□□□□ -0.33
PTCHD1-202ENST00000456522 TMC1Q8TDI8 760 aa12.99□□□□□ -0.33
PTCHD1-202ENST00000456522 SLC39A7Q92504 469 aa12.99□□□□□ -0.33
PTCHD1-202ENST00000456522 COLQQ9Y215 455 aaPredicted RBP12.99□□□□□ -0.33
PTCHD1-202ENST00000456522 RGPD8O14715 1765 aaPredicted RBP12.99□□□□□ -0.33
PTCHD1-202ENST00000456522 FMN2Q9NZ56 1722 aa12.99□□□□□ -0.33
PTCHD1-202ENST00000456522 CDC42BPGQ6DT37 1551 aa12.98□□□□□ -0.33
PTCHD1-202ENST00000456522 BRPF1P55201 1214 aaPredicted RBP12.98□□□□□ -0.33
PTCHD1-202ENST00000456522 NUDT16Q96DE0 195 aaKnown RBP12.98□□□□□ -0.33
PTCHD1-202ENST00000456522 POTEFA5A3E0 1075 aa12.97□□□□□ -0.33
PTCHD1-202ENST00000456522 DDX10Q13206 875 aaKnown RBP12.97□□□□□ -0.33
PTCHD1-202ENST00000456522 DCBLD2Q96PD2 775 aa12.97□□□□□ -0.33
PTCHD1-202ENST00000456522 ATAD2Q6PL18 1390 aa12.96□□□□□ -0.33
PTCHD1-202ENST00000456522 PRR36Q9H6K5 1346 aa12.96□□□□□ -0.33
PTCHD1-202ENST00000456522 C7P10643 843 aa12.96□□□□□ -0.33
PTCHD1-202ENST00000456522 PUS7Q96PZ0 661 aaKnown RBP12.96□□□□□ -0.33
PTCHD1-202ENST00000456522 SLC24A3Q9HC58 644 aa12.96□□□□□ -0.33
PTCHD1-202ENST00000456522 USP32Q8NFA0 1604 aa12.95□□□□□ -0.34
PTCHD1-202ENST00000456522 RBM26Q5T8P6 1007 aaKnown RBP12.95□□□□□ -0.34
PTCHD1-202ENST00000456522 SLC12A5Q9H2X9 1139 aa12.95□□□□□ -0.34
PTCHD1-202ENST00000456522 MYOM1P52179 1685 aa12.95□□□□□ -0.34
PTCHD1-202ENST00000456522 ATP7BP35670 1465 aa12.94□□□□□ -0.34
PTCHD1-202ENST00000456522 GPIHBP1Q8IV16 184 aa12.94□□□□□ -0.34
PTCHD1-202ENST00000456522 OXER1Q8TDS5 423 aa12.94□□□□□ -0.34
PTCHD1-202ENST00000456522 CABP1Q9NZU7 370 aa12.94□□□□□ -0.34
PTCHD1-202ENST00000456522 PPIP5K1Q6PFW1 1433 aa12.94□□□□□ -0.34
PTCHD1-202ENST00000456522 ITSN1Q15811 1721 aa12.93□□□□□ -0.34
PTCHD1-202ENST00000456522 SEC24BO95487 1268 aa12.93□□□□□ -0.34
PTCHD1-202ENST00000456522 DCCP43146 1447 aa12.93□□□□□ -0.34
PTCHD1-202ENST00000456522 ANKARQ7Z5J8 1434 aa12.93□□□□□ -0.34
PTCHD1-202ENST00000456522 ESCO1Q5FWF5 840 aa12.92□□□□□ -0.34
PTCHD1-202ENST00000456522 POTEHQ6S545 545 aa12.92□□□□□ -0.34
PTCHD1-202ENST00000456522 PMFBP1Q8TBY8 1022 aa12.92□□□□□ -0.34
PTCHD1-202ENST00000456522 PANK3Q9H999 370 aa12.92□□□□□ -0.34
PTCHD1-202ENST00000456522 TOPAZ1Q8N9V7 1692 aa12.92□□□□□ -0.34
PTCHD1-202ENST00000456522 C1orf167Q5SNV9 1468 aa12.91□□□□□ -0.34
PTCHD1-202ENST00000456522 MST1RQ04912 1400 aa12.91□□□□□ -0.34
PTCHD1-202ENST00000456522 PTGER2P43116 358 aa12.91□□□□□ -0.34
PTCHD1-202ENST00000456522 ORAI2Q96SN7 254 aa12.91□□□□□ -0.34
PTCHD1-202ENST00000456522 NGDNQ8NEJ9 315 aaKnown RBP12.9□□□□□ -0.34
PTCHD1-202ENST00000456522 CERKQ8TCT0 537 aa12.9□□□□□ -0.34
PTCHD1-202ENST00000456522 TERF2IPQ9NYB0 399 aa12.9□□□□□ -0.34
PTCHD1-202ENST00000456522 SLAIN2Q9P270 581 aa12.9□□□□□ -0.34
PTCHD1-202ENST00000456522 NINLQ9Y2I6 1382 aa12.9□□□□□ -0.34
PTCHD1-202ENST00000456522 PLEKHG3A1L390 1219 aa12.89□□□□□ -0.35
PTCHD1-202ENST00000456522 GPR37O15354 613 aa12.89□□□□□ -0.35
PTCHD1-202ENST00000456522 HDGFL2Q7Z4V5 671 aaPredicted RBP12.89□□□□□ -0.35
PTCHD1-202ENST00000456522 ACEP12821 1306 aa12.88□□□□□ -0.35
PTCHD1-202ENST00000456522 POTEIP0CG38 1075 aa12.88□□□□□ -0.35
PTCHD1-202ENST00000456522 METRNQ9UJH8 293 aa12.88□□□□□ -0.35
PTCHD1-202ENST00000456522 AKAP12Q02952 1782 aa12.87□□□□□ -0.35
PTCHD1-202ENST00000456522 A0A1W2PP64 1363 aa12.87□□□□□ -0.35
PTCHD1-202ENST00000456522 ANKRD36BQ8N2N9 1353 aa12.87□□□□□ -0.35
PTCHD1-202ENST00000456522 UBAP1LF5GYI3 381 aa12.87□□□□□ -0.35
PTCHD1-202ENST00000456522 MAP3K9P80192 1104 aa12.87□□□□□ -0.35
PTCHD1-202ENST00000456522 CNGB1Q14028 1251 aaPredicted RBP12.87□□□□□ -0.35
PTCHD1-202ENST00000456522 CD163L1Q9NR16 1453 aa12.86□□□□□ -0.35
PTCHD1-202ENST00000456522 KTN1Q86UP2 1357 aaKnown RBP12.86□□□□□ -0.35
PTCHD1-202ENST00000456522 DIEXFQ68CQ4 756 aaKnown RBP12.86□□□□□ -0.35
PTCHD1-202ENST00000456522 CARD14Q9BXL6 1004 aa12.86□□□□□ -0.35
PTCHD1-202ENST00000456522 KIF1AQ12756 1690 aa12.86□□□□□ -0.35
PTCHD1-202ENST00000456522 FOXO3O43524 673 aa12.85□□□□□ -0.35
PTCHD1-202ENST00000456522 TOM1O60784 492 aa12.85□□□□□ -0.35
PTCHD1-202ENST00000456522 PSME1Q06323 249 aa12.85□□□□□ -0.35
PTCHD1-202ENST00000456522 BRINP3Q76B58 766 aa12.85□□□□□ -0.35
PTCHD1-202ENST00000456522 KNSTRNQ9Y448 316 aa12.85□□□□□ -0.35
PTCHD1-202ENST00000456522 CPSF1Q10570 1443 aaKnown RBP12.85□□□□□ -0.35
PTCHD1-202ENST00000456522 NSD3Q9BZ95 1437 aa12.85□□□□□ -0.35
PTCHD1-202ENST00000456522 IQSEC2Q5JU85 1478 aa12.85□□□□□ -0.35
PTCHD1-202ENST00000456522 POLR3AO14802 1390 aaPredicted RBP12.84□□□□□ -0.35
PTCHD1-202ENST00000456522 SLC34A2O95436 690 aa12.84□□□□□ -0.35
PTCHD1-202ENST00000456522 PIP4K2BP78356 416 aa12.84□□□□□ -0.35
PTCHD1-202ENST00000456522 XPCQ01831 940 aaPredicted RBP12.84□□□□□ -0.35
PTCHD1-202ENST00000456522 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.84□□□□□ -0.35
PTCHD1-202ENST00000456522 PTCD2Q8WV60 388 aaKnown RBP12.84□□□□□ -0.35
PTCHD1-202ENST00000456522 DDX17Q92841 729 aaKnown RBP12.84□□□□□ -0.35
PTCHD1-202ENST00000456522 AK7Q96M32 723 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms