RNA–Protein interactions for RNA: ENST00000454289.7

TSFM-204, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TSFM, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-204ENST00000454289 NEFMP07197 916 aa17■□□□□ 0.31
TSFM-204ENST00000454289 SBNO1A3KN83 1393 aa17■□□□□ 0.31
TSFM-204ENST00000454289 IL16Q14005 1332 aa17■□□□□ 0.31
TSFM-204ENST00000454289 ABTB2Q8N961 1025 aa16.99■□□□□ 0.31
TSFM-204ENST00000454289 FANCIQ9NVI1 1328 aa16.99■□□□□ 0.31
TSFM-204ENST00000454289 TSR2Q969E8 191 aaKnown RBP16.99■□□□□ 0.31
TSFM-204ENST00000454289 AEBP1Q8IUX7 1158 aa16.98■□□□□ 0.31
TSFM-204ENST00000454289 FLT4P35916 1363 aa16.98■□□□□ 0.31
TSFM-204ENST00000454289 DLG5Q8TDM6 1919 aa16.98■□□□□ 0.31
TSFM-204ENST00000454289 ORAI2Q96SN7 254 aa16.98■□□□□ 0.31
TSFM-204ENST00000454289 RARSP54136 660 aaKnown RBP16.97■□□□□ 0.31
TSFM-204ENST00000454289 SULT6B1Q6IMI4 303 aa16.96■□□□□ 0.31
TSFM-204ENST00000454289 PSME1Q06323 249 aa16.96■□□□□ 0.31
TSFM-204ENST00000454289 AMPHP49418 695 aa16.95■□□□□ 0.3
TSFM-204ENST00000454289 C19orf44Q9H6X5 657 aa16.95■□□□□ 0.3
TSFM-204ENST00000454289 LMTK3Q96Q04 1460 aa16.95■□□□□ 0.3
TSFM-204ENST00000454289 TMEM94Q12767 1356 aa16.95■□□□□ 0.3
TSFM-204ENST00000454289 C1orf167Q5SNV9 1468 aa16.94■□□□□ 0.3
TSFM-204ENST00000454289 ARHGEF10O15013 1369 aa16.94■□□□□ 0.3
TSFM-204ENST00000454289 EXOSC9Q06265 439 aaKnown RBP16.94■□□□□ 0.3
TSFM-204ENST00000454289 THUMPD2Q9BTF0 503 aaKnown RBP16.93■□□□□ 0.3
TSFM-204ENST00000454289 KIF24Q5T7B8 1368 aa16.93■□□□□ 0.3
TSFM-204ENST00000454289 KIF1AQ12756 1690 aa16.93■□□□□ 0.3
TSFM-204ENST00000454289 FOXO3O43524 673 aa16.92■□□□□ 0.3
TSFM-204ENST00000454289 NFAT5O94916 1531 aa16.92■□□□□ 0.3
TSFM-204ENST00000454289 STRCQ7RTU9 1775 aa16.92■□□□□ 0.3
TSFM-204ENST00000454289 LTN1O94822 1766 aa16.92■□□□□ 0.3
TSFM-204ENST00000454289 CT47B1P0C2W7 299 aaPredicted RBP16.92■□□□□ 0.3
TSFM-204ENST00000454289 HOXC9P31274 260 aa16.92■□□□□ 0.3
TSFM-204ENST00000454289 TRPM3Q9HCF6 1732 aaPredicted RBP16.92■□□□□ 0.3
TSFM-204ENST00000454289 XPCQ01831 940 aaPredicted RBP16.91■□□□□ 0.3
TSFM-204ENST00000454289 BCL2L13Q9BXK5 485 aa16.91■□□□□ 0.3
TSFM-204ENST00000454289 MST1RQ04912 1400 aa16.9■□□□□ 0.3
TSFM-204ENST00000454289 NCOA3Q9Y6Q9 1424 aa16.9■□□□□ 0.3
TSFM-204ENST00000454289 LMOD3Q0VAK6 560 aa16.9■□□□□ 0.3
TSFM-204ENST00000454289 PDE3AQ14432 1141 aa16.89■□□□□ 0.3
TSFM-204ENST00000454289 EYA1Q99502 592 aa16.89■□□□□ 0.3
TSFM-204ENST00000454289 IGSF1Q8N6C5 1336 aa16.89■□□□□ 0.3
TSFM-204ENST00000454289 DCCP43146 1447 aa16.89■□□□□ 0.3
TSFM-204ENST00000454289 RTL1A6NKG5 1358 aa16.89■□□□□ 0.29
TSFM-204ENST00000454289 KDRP35968 1356 aa16.89■□□□□ 0.29
TSFM-204ENST00000454289 FAM83GA6ND36 823 aa16.89■□□□□ 0.29
TSFM-204ENST00000454289 CANXP27824 592 aaKnown RBP16.89■□□□□ 0.29
TSFM-204ENST00000454289 CALD1Q05682 793 aaKnown RBP16.89■□□□□ 0.29
TSFM-204ENST00000454289 FRAT1Q92837 279 aaPredicted RBP16.89■□□□□ 0.29
TSFM-204ENST00000454289 ATF3P18847 181 aa16.88■□□□□ 0.29
TSFM-204ENST00000454289 LAS1LQ9Y4W2 734 aaKnown RBP16.88■□□□□ 0.29
TSFM-204ENST00000454289 ZNF853P0CG23 659 aa16.88■□□□□ 0.29
TSFM-204ENST00000454289 IFT57Q9NWB7 429 aa16.88■□□□□ 0.29
TSFM-204ENST00000454289 KRT28Q7Z3Y7 464 aa16.87■□□□□ 0.29
TSFM-204ENST00000454289 PANK1Q8TE04 598 aa16.87■□□□□ 0.29
TSFM-204ENST00000454289 XIRP1Q702N8 1843 aaKnown RBP16.87■□□□□ 0.29
TSFM-204ENST00000454289 DCTN1Q14203 1278 aa16.87■□□□□ 0.29
TSFM-204ENST00000454289 TNNQ9UQP3 1299 aa16.87■□□□□ 0.29
TSFM-204ENST00000454289 SLIT3O75094 1523 aa16.86■□□□□ 0.29
TSFM-204ENST00000454289 GNAI1P63096 354 aa16.86■□□□□ 0.29
TSFM-204ENST00000454289 KCNH5Q8NCM2 988 aa16.85■□□□□ 0.29
TSFM-204ENST00000454289 SSH1Q8WYL5 1049 aa16.85■□□□□ 0.29
TSFM-204ENST00000454289 PHRF1Q9P1Y6 1649 aaKnown RBP16.85■□□□□ 0.29
TSFM-204ENST00000454289 IP6K1Q92551 441 aa16.85■□□□□ 0.29
TSFM-204ENST00000454289 LTV1Q96GA3 475 aaPredicted RBP16.84■□□□□ 0.29
TSFM-204ENST00000454289 MBIPQ9NS73 344 aa16.84■□□□□ 0.29
TSFM-204ENST00000454289 SMC4Q9NTJ3 1288 aa16.84■□□□□ 0.29
TSFM-204ENST00000454289 RLBP1P12271 317 aa16.84■□□□□ 0.29
TSFM-204ENST00000454289 CFAP44Q96MT7 982 aa16.84■□□□□ 0.29
TSFM-204ENST00000454289 COG6Q9Y2V7 657 aa16.84■□□□□ 0.29
TSFM-204ENST00000454289 ALS2Q96Q42 1657 aa16.84■□□□□ 0.29
TSFM-204ENST00000454289 USP19O94966 1318 aa16.83■□□□□ 0.29
TSFM-204ENST00000454289 MTHFSDQ2M296 383 aaKnown RBP16.83■□□□□ 0.28
TSFM-204ENST00000454289 LMOD2Q6P5Q4 547 aa16.82■□□□□ 0.28
TSFM-204ENST00000454289 CADPS2Q86UW7 1296 aa16.82■□□□□ 0.28
TSFM-204ENST00000454289 KDM2BQ8NHM5 1336 aa16.82■□□□□ 0.28
TSFM-204ENST00000454289 GCP02774 474 aa16.82■□□□□ 0.28
TSFM-204ENST00000454289 MSH6P52701 1360 aa16.82■□□□□ 0.28
TSFM-204ENST00000454289 ZBTB7CA1YPR0 619 aa16.81■□□□□ 0.28
TSFM-204ENST00000454289 ZKSCAN2Q63HK3 967 aa16.81■□□□□ 0.28
TSFM-204ENST00000454289 MCM10Q7L590 875 aa16.81■□□□□ 0.28
TSFM-204ENST00000454289 DDX17Q92841 729 aaKnown RBP16.81■□□□□ 0.28
TSFM-204ENST00000454289 PLEKHG5O94827 1062 aa16.81■□□□□ 0.28
TSFM-204ENST00000454289 ARHGEF25Q86VW2 580 aa16.8■□□□□ 0.28
TSFM-204ENST00000454289 TSPYL6Q8N831 410 aa16.8■□□□□ 0.28
TSFM-204ENST00000454289 RBM19Q9Y4C8 960 aaKnown RBP16.8■□□□□ 0.28
TSFM-204ENST00000454289 VAMP4O75379 141 aa16.79■□□□□ 0.28
TSFM-204ENST00000454289 ALDH1L2Q3SY69 923 aa16.79■□□□□ 0.28
TSFM-204ENST00000454289 CLUAP1Q96AJ1 413 aa16.79■□□□□ 0.28
TSFM-204ENST00000454289 CRB1P82279 1406 aa16.79■□□□□ 0.28
TSFM-204ENST00000454289 USHBP1Q8N6Y0 703 aa16.79■□□□□ 0.28
TSFM-204ENST00000454289 RGPD2P0DJD1 1756 aa16.79■□□□□ 0.28
TSFM-204ENST00000454289 ZNF335Q9H4Z2 1342 aaPredicted RBP16.79■□□□□ 0.28
TSFM-204ENST00000454289 MED1Q15648 1581 aaPredicted RBP16.78■□□□□ 0.28
TSFM-204ENST00000454289 GAS2L2Q8NHY3 880 aa16.78■□□□□ 0.28
TSFM-204ENST00000454289 ZNF428Q96B54 188 aa16.78■□□□□ 0.28
TSFM-204ENST00000454289 C8orf58Q8NAV2 365 aa16.78■□□□□ 0.28
TSFM-204ENST00000454289 NOB1Q9ULX3 412 aaKnown RBP16.78■□□□□ 0.28
TSFM-204ENST00000454289 CHL1O00533 1208 aa16.77■□□□□ 0.28
TSFM-204ENST00000454289 TRIM27P14373 513 aa16.77■□□□□ 0.28
TSFM-204ENST00000454289 NBPF6Q5VWK0 638 aa16.77■□□□□ 0.28
TSFM-204ENST00000454289 CENPQQ7L2Z9 268 aaPredicted RBP16.77■□□□□ 0.28
TSFM-204ENST00000454289 DZIP1LQ8IYY4 767 aaKnown RBP16.77■□□□□ 0.28
TSFM-204ENST00000454289 NBPF4Q96M43 638 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms