RNA–Protein interactions for RNA: ENST00000453727.6

LMO3-210, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 2,403 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-210ENST00000453727 MARF1Q9Y4F3 1742 aaKnown RBP11.11□□□□□ -0.63
LMO3-210ENST00000453727 NPHP3Q7Z494 1330 aa11.11□□□□□ -0.63
LMO3-210ENST00000453727 APAF1O14727 1248 aa11.1□□□□□ -0.63
LMO3-210ENST00000453727 DIAPH1O60610 1272 aaKnown RBP11.1□□□□□ -0.63
LMO3-210ENST00000453727 U2AF1L5P0DN76 240 aaPredicted RBP11.1□□□□□ -0.63
LMO3-210ENST00000453727 U2AF1Q01081 240 aaKnown RBP eCLIP11.1□□□□□ -0.63
LMO3-210ENST00000453727 LMOD2Q6P5Q4 547 aa11.1□□□□□ -0.63
LMO3-210ENST00000453727 CDK12Q9NYV4 1490 aaPredicted RBP11.1□□□□□ -0.63
LMO3-210ENST00000453727 USP54Q70EL1 1684 aa11.1□□□□□ -0.63
LMO3-210ENST00000453727 U2SURPO15042 1029 aaKnown RBP11.09□□□□□ -0.63
LMO3-210ENST00000453727 NUDCQ9Y266 331 aa11.09□□□□□ -0.63
LMO3-210ENST00000453727 RUNDC1Q96C34 613 aa11.08□□□□□ -0.64
LMO3-210ENST00000453727 PEAK1Q9H792 1746 aa11.08□□□□□ -0.64
LMO3-210ENST00000453727 TRPM3Q9HCF6 1732 aaPredicted RBP11.08□□□□□ -0.64
LMO3-210ENST00000453727 PDE3BQ13370 1112 aa11.08□□□□□ -0.64
LMO3-210ENST00000453727 CDCA7LQ96GN5 454 aa11.08□□□□□ -0.64
LMO3-210ENST00000453727 ZNF521Q96K83 1311 aa11.07□□□□□ -0.64
LMO3-210ENST00000453727 IQSEC2Q5JU85 1478 aa11.07□□□□□ -0.64
LMO3-210ENST00000453727 IL13P35225 146 aa11.06□□□□□ -0.64
LMO3-210ENST00000453727 GSE1Q14687 1217 aa11.06□□□□□ -0.64
LMO3-210ENST00000453727 PXDNQ92626 1479 aa11.06□□□□□ -0.64
LMO3-210ENST00000453727 MAP3K19Q56UN5 1328 aa11.06□□□□□ -0.64
LMO3-210ENST00000453727 TCP11L2Q8N4U5 519 aa11.06□□□□□ -0.64
LMO3-210ENST00000453727 SBNO1A3KN83 1393 aa11.05□□□□□ -0.64
LMO3-210ENST00000453727 PLEKHF1Q96S99 279 aa11.05□□□□□ -0.64
LMO3-210ENST00000453727 LAS1LQ9Y4W2 734 aaKnown RBP11.05□□□□□ -0.64
LMO3-210ENST00000453727 KCNH5Q8NCM2 988 aa11.05□□□□□ -0.64
LMO3-210ENST00000453727 RRP7AQ9Y3A4 280 aaKnown RBP11.05□□□□□ -0.64
LMO3-210ENST00000453727 ALS2Q96Q42 1657 aa11.05□□□□□ -0.64
LMO3-210ENST00000453727 SOS2Q07890 1332 aaPredicted RBP11.04□□□□□ -0.64
LMO3-210ENST00000453727 NEUROD2Q15784 382 aa11.04□□□□□ -0.64
LMO3-210ENST00000453727 HSP90AB2PQ58FF8 381 aa11.04□□□□□ -0.64
LMO3-210ENST00000453727 FAM43AQ8N2R8 423 aa11.04□□□□□ -0.64
LMO3-210ENST00000453727 TNS3Q68CZ2 1445 aa11.04□□□□□ -0.64
LMO3-210ENST00000453727 SPATA31A3Q5VYP0 1347 aa11.04□□□□□ -0.64
LMO3-210ENST00000453727 GCP02774 474 aa11.04□□□□□ -0.64
LMO3-210ENST00000453727 AMPHP49418 695 aa11.04□□□□□ -0.64
LMO3-210ENST00000453727 NGEFQ8N5V2 710 aa11.04□□□□□ -0.64
LMO3-210ENST00000453727 HMOX1P09601 288 aa11.03□□□□□ -0.64
LMO3-210ENST00000453727 GOLGA2Q08379 1002 aa11.03□□□□□ -0.64
LMO3-210ENST00000453727 EIF4A2Q14240 407 aaKnown RBP11.03□□□□□ -0.64
LMO3-210ENST00000453727 FLT4P35916 1363 aa11.03□□□□□ -0.64
LMO3-210ENST00000453727 FCHSD2O94868 740 aa11.03□□□□□ -0.64
LMO3-210ENST00000453727 USP19O94966 1318 aa11.02□□□□□ -0.64
LMO3-210ENST00000453727 LTN1O94822 1766 aa11.02□□□□□ -0.64
LMO3-210ENST00000453727 ROBO1Q9Y6N7 1651 aa11.02□□□□□ -0.65
LMO3-210ENST00000453727 NFAT5O94916 1531 aa11.02□□□□□ -0.65
LMO3-210ENST00000453727 TOM1O60784 492 aa11.02□□□□□ -0.65
LMO3-210ENST00000453727 WWC1Q8IX03 1113 aa11.02□□□□□ -0.65
LMO3-210ENST00000453727 ARHGEF10O15013 1369 aa11.02□□□□□ -0.65
LMO3-210ENST00000453727 PRKAR2BP31323 418 aa11.01□□□□□ -0.65
LMO3-210ENST00000453727 PHF23Q9BUL5 403 aaPredicted RBP11.01□□□□□ -0.65
LMO3-210ENST00000453727 SPINK5Q9NQ38 1064 aaPredicted RBP11.01□□□□□ -0.65
LMO3-210ENST00000453727 NHSL1Q5SYE7 1610 aa11.01□□□□□ -0.65
LMO3-210ENST00000453727 MAPK8IP3Q9UPT6 1336 aa11.01□□□□□ -0.65
LMO3-210ENST00000453727 SLIT3O75094 1523 aa11.01□□□□□ -0.65
LMO3-210ENST00000453727 ZBTB7CA1YPR0 619 aa11.01□□□□□ -0.65
LMO3-210ENST00000453727 CABLES1Q8TDN4 633 aa11.01□□□□□ -0.65
LMO3-210ENST00000453727 PNNQ9H307 717 aaKnown RBP11.01□□□□□ -0.65
LMO3-210ENST00000453727 RGPD1P0DJD0 1748 aa11.01□□□□□ -0.65
LMO3-210ENST00000453727 MED1Q15648 1581 aaPredicted RBP11.01□□□□□ -0.65
LMO3-210ENST00000453727 HOXC9P31274 260 aa11□□□□□ -0.65
LMO3-210ENST00000453727 SLFN5Q08AF3 891 aa11□□□□□ -0.65
LMO3-210ENST00000453727 DUSP27Q5VZP5 1158 aa11□□□□□ -0.65
LMO3-210ENST00000453727 KIF24Q5T7B8 1368 aa11□□□□□ -0.65
LMO3-210ENST00000453727 TMPOP42166 694 aaKnown RBP11□□□□□ -0.65
LMO3-210ENST00000453727 CCDC27Q2M243 656 aa11□□□□□ -0.65
LMO3-210ENST00000453727 NCBP3Q53F19 620 aaKnown RBP11□□□□□ -0.65
LMO3-210ENST00000453727 PIP4K2BP78356 416 aa10.99□□□□□ -0.65
LMO3-210ENST00000453727 ARHGEF25Q86VW2 580 aa10.99□□□□□ -0.65
LMO3-210ENST00000453727 PHACTR3Q96KR7 559 aa10.99□□□□□ -0.65
LMO3-210ENST00000453727 UBAP1LF5GYI3 381 aa10.99□□□□□ -0.65
LMO3-210ENST00000453727 ZC3H6P61129 1189 aaKnown RBP10.99□□□□□ -0.65
LMO3-210ENST00000453727 TRMT2AQ8IZ69 625 aaKnown RBP10.99□□□□□ -0.65
LMO3-210ENST00000453727 RTL1A6NKG5 1358 aa10.98□□□□□ -0.65
LMO3-210ENST00000453727 NPM2Q86SE8 214 aaKnown RBP10.98□□□□□ -0.65
LMO3-210ENST00000453727 AEBP1Q8IUX7 1158 aa10.98□□□□□ -0.65
LMO3-210ENST00000453727 IP6K1Q92551 441 aa10.98□□□□□ -0.65
LMO3-210ENST00000453727 E9PSI1 815 aa10.98□□□□□ -0.65
LMO3-210ENST00000453727 HSP90AA2PQ14568 343 aaPredicted RBP10.98□□□□□ -0.65
LMO3-210ENST00000453727 SULT6B1Q6IMI4 303 aa10.98□□□□□ -0.65
LMO3-210ENST00000453727 TRIM35Q9UPQ4 493 aa10.98□□□□□ -0.65
LMO3-210ENST00000453727 PHRF1Q9P1Y6 1649 aaKnown RBP10.97□□□□□ -0.65
LMO3-210ENST00000453727 RIPK4P57078 832 aa10.97□□□□□ -0.65
LMO3-210ENST00000453727 LRRC59Q96AG4 307 aaKnown RBP10.97□□□□□ -0.65
LMO3-210ENST00000453727 LTV1Q96GA3 475 aaPredicted RBP10.97□□□□□ -0.65
LMO3-210ENST00000453727 RCAN3Q9UKA8 241 aa10.97□□□□□ -0.65
LMO3-210ENST00000453727 RNF123Q5XPI4 1314 aa10.97□□□□□ -0.65
LMO3-210ENST00000453727 WDR63Q8IWG1 891 aa10.97□□□□□ -0.65
LMO3-210ENST00000453727 CERKQ8TCT0 537 aa10.97□□□□□ -0.65
LMO3-210ENST00000453727 AHDC1Q5TGY3 1603 aaPredicted RBP10.97□□□□□ -0.65
LMO3-210ENST00000453727 DLG5Q8TDM6 1919 aa10.96□□□□□ -0.65
LMO3-210ENST00000453727 HAP1P54257 671 aaPredicted RBP10.96□□□□□ -0.65
LMO3-210ENST00000453727 CRYBG1Q9Y4K1 1723 aa10.96□□□□□ -0.66
LMO3-210ENST00000453727 EYA1Q99502 592 aa10.96□□□□□ -0.66
LMO3-210ENST00000453727 IGSF1Q8N6C5 1336 aa10.95□□□□□ -0.66
LMO3-210ENST00000453727 NFE2L2Q16236 605 aa10.95□□□□□ -0.66
LMO3-210ENST00000453727 AXIN2Q9Y2T1 843 aa10.95□□□□□ -0.66
LMO3-210ENST00000453727 RRP9O43818 475 aaKnown RBP10.95□□□□□ -0.66
LMO3-210ENST00000453727 KIAA0232Q92628 1395 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms