RNA–Protein interactions for RNA: ENST00000453297.5

MCF2L-219, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 1,819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-219ENST00000453297 NEFMP07197 916 aa32.12■■■□□ 2.73
MCF2L-219ENST00000453297 RGPD1P0DJD0 1748 aa32.12■■■□□ 2.73
MCF2L-219ENST00000453297 TRPM3Q9HCF6 1732 aaPredicted RBP32.11■■■□□ 2.73
MCF2L-219ENST00000453297 RIPK4P57078 832 aa32.11■■■□□ 2.73
MCF2L-219ENST00000453297 AMPHP49418 695 aa32.1■■■□□ 2.73
MCF2L-219ENST00000453297 CADPS2Q86UW7 1296 aa32.1■■■□□ 2.73
MCF2L-219ENST00000453297 PHACTR3Q96KR7 559 aa32.1■■■□□ 2.73
MCF2L-219ENST00000453297 PPP4R2Q9NY27 417 aa32.1■■■□□ 2.73
MCF2L-219ENST00000453297 KIF24Q5T7B8 1368 aa32.09■■■□□ 2.73
MCF2L-219ENST00000453297 MSH6P52701 1360 aa32.09■■■□□ 2.73
MCF2L-219ENST00000453297 XPCQ01831 940 aaPredicted RBP32.07■■■□□ 2.73
MCF2L-219ENST00000453297 KRT28Q7Z3Y7 464 aa32.07■■■□□ 2.73
MCF2L-219ENST00000453297 NFE2L2Q16236 605 aa32.06■■■□□ 2.72
MCF2L-219ENST00000453297 ZNF335Q9H4Z2 1342 aaPredicted RBP32.05■■■□□ 2.72
MCF2L-219ENST00000453297 NFAT5O94916 1531 aa32.05■■■□□ 2.72
MCF2L-219ENST00000453297 LTN1O94822 1766 aa32.05■■■□□ 2.72
MCF2L-219ENST00000453297 SULT6B1Q6IMI4 303 aa32.03■■■□□ 2.72
MCF2L-219ENST00000453297 HOXC9P31274 260 aa32.03■■■□□ 2.72
MCF2L-219ENST00000453297 MYH16Q9H6N6 1097 aa32.03■■■□□ 2.72
MCF2L-219ENST00000453297 AEBP1Q8IUX7 1158 aa32.02■■■□□ 2.72
MCF2L-219ENST00000453297 IL16Q14005 1332 aa32.01■■■□□ 2.72
MCF2L-219ENST00000453297 ARHGEF10O15013 1369 aa32.01■■■□□ 2.71
MCF2L-219ENST00000453297 KCNH5Q8NCM2 988 aa32■■■□□ 2.71
MCF2L-219ENST00000453297 DLG5Q8TDM6 1919 aa32■■■□□ 2.71
MCF2L-219ENST00000453297 RTL1A6NKG5 1358 aa32■■■□□ 2.71
MCF2L-219ENST00000453297 SLIT3O75094 1523 aa31.99■■■□□ 2.71
MCF2L-219ENST00000453297 PLIN1O60240 522 aa31.99■■■□□ 2.71
MCF2L-219ENST00000453297 ALS2Q96Q42 1657 aa31.98■■■□□ 2.71
MCF2L-219ENST00000453297 PHRF1Q9P1Y6 1649 aaKnown RBP31.95■■■□□ 2.71
MCF2L-219ENST00000453297 LMOD2Q6P5Q4 547 aa31.95■■■□□ 2.7
MCF2L-219ENST00000453297 IGSF1Q8N6C5 1336 aa31.95■■■□□ 2.7
MCF2L-219ENST00000453297 EYA1Q99502 592 aa31.94■■■□□ 2.7
MCF2L-219ENST00000453297 USP19O94966 1318 aa31.94■■■□□ 2.7
MCF2L-219ENST00000453297 IP6K1Q92551 441 aa31.93■■■□□ 2.7
MCF2L-219ENST00000453297 FANCIQ9NVI1 1328 aa31.93■■■□□ 2.7
MCF2L-219ENST00000453297 KDRP35968 1356 aa31.92■■■□□ 2.7
MCF2L-219ENST00000453297 GCP02774 474 aa31.92■■■□□ 2.7
MCF2L-219ENST00000453297 DDX17Q92841 729 aaKnown RBP31.92■■■□□ 2.7
MCF2L-219ENST00000453297 GOLGA6L2Q8N9W4 650 aaPredicted RBP31.91■■■□□ 2.7
MCF2L-219ENST00000453297 NPHP3Q7Z494 1330 aa31.91■■■□□ 2.7
MCF2L-219ENST00000453297 TSR2Q969E8 191 aaKnown RBP31.91■■■□□ 2.7
MCF2L-219ENST00000453297 BCAR3O75815 825 aa31.9■■■□□ 2.7
MCF2L-219ENST00000453297 LMOD3Q0VAK6 560 aa31.9■■■□□ 2.7
MCF2L-219ENST00000453297 PELP1Q8IZL8 1130 aaKnown RBP31.9■■■□□ 2.7
MCF2L-219ENST00000453297 EXOC6Q8TAG9 804 aa31.9■■■□□ 2.7
MCF2L-219ENST00000453297 B4GALNT3Q6L9W6 998 aa31.89■■■□□ 2.69
MCF2L-219ENST00000453297 CALD1Q05682 793 aaKnown RBP31.87■■■□□ 2.69
MCF2L-219ENST00000453297 PXDNQ92626 1479 aa31.87■■■□□ 2.69
MCF2L-219ENST00000453297 ARHGEF25Q86VW2 580 aa31.86■■■□□ 2.69
MCF2L-219ENST00000453297 LTV1Q96GA3 475 aaPredicted RBP31.86■■■□□ 2.69
MCF2L-219ENST00000453297 BRINP3Q76B58 766 aa31.85■■■□□ 2.69
MCF2L-219ENST00000453297 MED1Q15648 1581 aaPredicted RBP31.85■■■□□ 2.69
MCF2L-219ENST00000453297 RARSP54136 660 aaKnown RBP31.84■■■□□ 2.69
MCF2L-219ENST00000453297 C20orf194Q5TEA3 1177 aa31.84■■■□□ 2.69
MCF2L-219ENST00000453297 THUMPD2Q9BTF0 503 aaKnown RBP31.84■■■□□ 2.69
MCF2L-219ENST00000453297 ZBTB7CA1YPR0 619 aa31.84■■■□□ 2.69
MCF2L-219ENST00000453297 PLEKHG5O94827 1062 aa31.84■■■□□ 2.69
MCF2L-219ENST00000453297 CT47B1P0C2W7 299 aaPredicted RBP31.84■■■□□ 2.69
MCF2L-219ENST00000453297 EXOSC9Q06265 439 aaKnown RBP31.84■■■□□ 2.69
MCF2L-219ENST00000453297 SLAIN2Q9P270 581 aa31.83■■■□□ 2.69
MCF2L-219ENST00000453297 TNS3Q68CZ2 1445 aa31.82■■■□□ 2.68
MCF2L-219ENST00000453297 CRBNQ96SW2 442 aa31.82■■■□□ 2.68
MCF2L-219ENST00000453297 FAM83GA6ND36 823 aa31.8■■■□□ 2.68
MCF2L-219ENST00000453297 IFT57Q9NWB7 429 aa31.79■■■□□ 2.68
MCF2L-219ENST00000453297 ZNF853P0CG23 659 aa31.79■■■□□ 2.68
MCF2L-219ENST00000453297 GNAI1P63096 354 aa31.79■■■□□ 2.68
MCF2L-219ENST00000453297 CCDC136Q96JN2 1154 aa31.79■■■□□ 2.68
MCF2L-219ENST00000453297 LAS1LQ9Y4W2 734 aaKnown RBP31.79■■■□□ 2.68
MCF2L-219ENST00000453297 SPATA31A3Q5VYP0 1347 aa31.78■■■□□ 2.68
MCF2L-219ENST00000453297 MTHFSDQ2M296 383 aaKnown RBP31.77■■■□□ 2.68
MCF2L-219ENST00000453297 DCTN1Q14203 1278 aa31.77■■■□□ 2.68
MCF2L-219ENST00000453297 RGPD2P0DJD1 1756 aa31.76■■■□□ 2.67
MCF2L-219ENST00000453297 CRYBG1Q9Y4K1 1723 aa31.74■■■□□ 2.67
MCF2L-219ENST00000453297 CFAP44Q96MT7 982 aa31.74■■■□□ 2.67
MCF2L-219ENST00000453297 NBPF6Q5VWK0 638 aa31.73■■■□□ 2.67
MCF2L-219ENST00000453297 GAS2L2Q8NHY3 880 aa31.73■■■□□ 2.67
MCF2L-219ENST00000453297 NBPF4Q96M43 638 aa31.73■■■□□ 2.67
MCF2L-219ENST00000453297 USHBP1Q8N6Y0 703 aa31.72■■■□□ 2.67
MCF2L-219ENST00000453297 RGPD5Q99666 1765 aa31.72■■■□□ 2.67
MCF2L-219ENST00000453297 ZC3H6P61129 1189 aaKnown RBP31.71■■■□□ 2.67
MCF2L-219ENST00000453297 MBIPQ9NS73 344 aa31.71■■■□□ 2.67
MCF2L-219ENST00000453297 BCL2L13Q9BXK5 485 aa31.7■■■□□ 2.67
MCF2L-219ENST00000453297 CANXP27824 592 aaKnown RBP31.7■■■□□ 2.66
MCF2L-219ENST00000453297 PDE3AQ14432 1141 aa31.7■■■□□ 2.66
MCF2L-219ENST00000453297 MCM10Q7L590 875 aa31.7■■■□□ 2.66
MCF2L-219ENST00000453297 SOS2Q07890 1332 aaPredicted RBP31.69■■■□□ 2.66
MCF2L-219ENST00000453297 AXIN2Q9Y2T1 843 aa31.69■■■□□ 2.66
MCF2L-219ENST00000453297 ANKRD24Q8TF21 1146 aa31.68■■■□□ 2.66
MCF2L-219ENST00000453297 FRAT1Q92837 279 aaPredicted RBP31.68■■■□□ 2.66
MCF2L-219ENST00000453297 CABLES1Q8TDN4 633 aa31.68■■■□□ 2.66
MCF2L-219ENST00000453297 LRRC59Q96AG4 307 aaKnown RBP31.68■■■□□ 2.66
MCF2L-219ENST00000453297 COL18A1P39060 1754 aa31.66■■■□□ 2.66
MCF2L-219ENST00000453297 CAMTA1Q9Y6Y1 1673 aa31.66■■■□□ 2.66
MCF2L-219ENST00000453297 RTF1Q92541 710 aaKnown RBP31.65■■■□□ 2.66
MCF2L-219ENST00000453297 NCAPD2Q15021 1401 aa31.65■■■□□ 2.66
MCF2L-219ENST00000453297 CRB1P82279 1406 aa31.65■■■□□ 2.66
MCF2L-219ENST00000453297 SSH1Q8WYL5 1049 aa31.65■■■□□ 2.66
MCF2L-219ENST00000453297 NHSL1Q5SYE7 1610 aa31.65■■■□□ 2.66
MCF2L-219ENST00000453297 HTATSF1O43719 755 aaKnown RBP31.64■■■□□ 2.66
MCF2L-219ENST00000453297 SMC4Q9NTJ3 1288 aa31.64■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms