RNA–Protein interactions for RNA: ENST00000453262.2

TRBV21-1-201, Transcript of T cell receptor beta variable 21-1 (pseudogene), humanhuman

BASIC

Gene TRBV21-1, Length 348 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV21-1-201ENST00000453262 ATF3P18847 181 aa11.6□□□□□ -0.55
TRBV21-1-201ENST00000453262 POTEBQ6S5H4 581 aa11.6□□□□□ -0.55
TRBV21-1-201ENST00000453262 SLC12A5Q9H2X9 1139 aa11.6□□□□□ -0.55
TRBV21-1-201ENST00000453262 C19orf44Q9H6X5 657 aa11.6□□□□□ -0.55
TRBV21-1-201ENST00000453262 NCOA3Q9Y6Q9 1424 aa11.6□□□□□ -0.55
TRBV21-1-201ENST00000453262 ANKARQ7Z5J8 1434 aa11.59□□□□□ -0.55
TRBV21-1-201ENST00000453262 KIF1AQ12756 1690 aa11.59□□□□□ -0.55
TRBV21-1-201ENST00000453262 FAM205CA6NFA0 338 aa11.58□□□□□ -0.56
TRBV21-1-201ENST00000453262 PUS7Q96PZ0 661 aaKnown RBP11.58□□□□□ -0.56
TRBV21-1-201ENST00000453262 PANK3Q9H999 370 aa11.58□□□□□ -0.56
TRBV21-1-201ENST00000453262 CABP1Q9NZU7 370 aa11.58□□□□□ -0.56
TRBV21-1-201ENST00000453262 DCCP43146 1447 aa11.58□□□□□ -0.56
TRBV21-1-201ENST00000453262 NINLQ9Y2I6 1382 aa11.57□□□□□ -0.56
TRBV21-1-201ENST00000453262 EFCAB3Q8N7B9 438 aa11.57□□□□□ -0.56
TRBV21-1-201ENST00000453262 PMFBP1Q8TBY8 1022 aa11.57□□□□□ -0.56
TRBV21-1-201ENST00000453262 HS3ST6Q96QI5 342 aa11.57□□□□□ -0.56
TRBV21-1-201ENST00000453262 ANKRD26Q9UPS8 1709 aa11.57□□□□□ -0.56
TRBV21-1-201ENST00000453262 ESCO1Q5FWF5 840 aa11.56□□□□□ -0.56
TRBV21-1-201ENST00000453262 HDGFL2Q7Z4V5 671 aaPredicted RBP11.56□□□□□ -0.56
TRBV21-1-201ENST00000453262 CADPS2Q86UW7 1296 aa11.56□□□□□ -0.56
TRBV21-1-201ENST00000453262 NSD3Q9BZ95 1437 aa11.56□□□□□ -0.56
TRBV21-1-201ENST00000453262 TERF2IPQ9NYB0 399 aa11.56□□□□□ -0.56
TRBV21-1-201ENST00000453262 A0A1W2PP64 1363 aa11.55□□□□□ -0.56
TRBV21-1-201ENST00000453262 ANKRD36BQ8N2N9 1353 aa11.55□□□□□ -0.56
TRBV21-1-201ENST00000453262 NRKQ7Z2Y5 1582 aa11.55□□□□□ -0.56
TRBV21-1-201ENST00000453262 MST1RQ04912 1400 aa11.55□□□□□ -0.56
TRBV21-1-201ENST00000453262 HOXB3P14651 431 aaPredicted RBP11.55□□□□□ -0.56
TRBV21-1-201ENST00000453262 NGDNQ8NEJ9 315 aaKnown RBP11.55□□□□□ -0.56
TRBV21-1-201ENST00000453262 C1orf167Q5SNV9 1468 aa11.55□□□□□ -0.56
TRBV21-1-201ENST00000453262 CD163L1Q9NR16 1453 aa11.55□□□□□ -0.56
TRBV21-1-201ENST00000453262 KTN1Q86UP2 1357 aaKnown RBP11.54□□□□□ -0.56
TRBV21-1-201ENST00000453262 KNSTRNQ9Y448 316 aa11.54□□□□□ -0.56
TRBV21-1-201ENST00000453262 ACEP12821 1306 aa11.54□□□□□ -0.56
TRBV21-1-201ENST00000453262 ORAI2Q96SN7 254 aa11.53□□□□□ -0.56
TRBV21-1-201ENST00000453262 PHF8Q9UPP1 1060 aa11.53□□□□□ -0.56
TRBV21-1-201ENST00000453262 ROBO1Q9Y6N7 1651 aa11.52□□□□□ -0.56
TRBV21-1-201ENST00000453262 CARD14Q9BXL6 1004 aa11.52□□□□□ -0.57
TRBV21-1-201ENST00000453262 KRTAP3-3Q9BYR6 98 aa11.52□□□□□ -0.57
TRBV21-1-201ENST00000453262 KRTAP3-2Q9BYR7 98 aa11.52□□□□□ -0.57
TRBV21-1-201ENST00000453262 PLEKHG3A1L390 1219 aa11.51□□□□□ -0.57
TRBV21-1-201ENST00000453262 ANP32CO43423 234 aa11.51□□□□□ -0.57
TRBV21-1-201ENST00000453262 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.51□□□□□ -0.57
TRBV21-1-201ENST00000453262 CPSF1Q10570 1443 aaKnown RBP11.51□□□□□ -0.57
TRBV21-1-201ENST00000453262 TRPM3Q9HCF6 1732 aaPredicted RBP11.5□□□□□ -0.57
TRBV21-1-201ENST00000453262 XPCQ01831 940 aaPredicted RBP11.5□□□□□ -0.57
TRBV21-1-201ENST00000453262 CC2D1BQ5T0F9 858 aaKnown RBP11.5□□□□□ -0.57
TRBV21-1-201ENST00000453262 SLAIN2Q9P270 581 aa11.5□□□□□ -0.57
TRBV21-1-201ENST00000453262 MAP2P11137 1827 aaKnown RBP11.5□□□□□ -0.57
TRBV21-1-201ENST00000453262 USP6P35125 1406 aa11.5□□□□□ -0.57
TRBV21-1-201ENST00000453262 EDC4Q6P2E9 1401 aaKnown RBP11.5□□□□□ -0.57
TRBV21-1-201ENST00000453262 NHSL1Q5SYE7 1610 aa11.49□□□□□ -0.57
TRBV21-1-201ENST00000453262 PIK3C2AO00443 1686 aa11.49□□□□□ -0.57
TRBV21-1-201ENST00000453262 PSME1Q06323 249 aa11.49□□□□□ -0.57
TRBV21-1-201ENST00000453262 POLR3AO14802 1390 aaPredicted RBP11.49□□□□□ -0.57
TRBV21-1-201ENST00000453262 PER1O15534 1290 aaPredicted RBP11.48□□□□□ -0.57
TRBV21-1-201ENST00000453262 FOXO3O43524 673 aa11.48□□□□□ -0.57
TRBV21-1-201ENST00000453262 ZNF710Q8N1W2 664 aa11.48□□□□□ -0.57
TRBV21-1-201ENST00000453262 DDX17Q92841 729 aaKnown RBP11.48□□□□□ -0.57
TRBV21-1-201ENST00000453262 CGNL1Q0VF96 1302 aa11.48□□□□□ -0.57
TRBV21-1-201ENST00000453262 PHLPP1O60346 1717 aa11.48□□□□□ -0.57
TRBV21-1-201ENST00000453262 MARF1Q9Y4F3 1742 aaKnown RBP11.48□□□□□ -0.57
TRBV21-1-201ENST00000453262 UBAP1LF5GYI3 381 aa11.47□□□□□ -0.57
TRBV21-1-201ENST00000453262 RIOK3O14730 519 aaKnown RBP11.47□□□□□ -0.57
TRBV21-1-201ENST00000453262 PIP4K2BP78356 416 aa11.47□□□□□ -0.57
TRBV21-1-201ENST00000453262 BRINP3Q76B58 766 aa11.47□□□□□ -0.57
TRBV21-1-201ENST00000453262 CERKQ8TCT0 537 aa11.47□□□□□ -0.57
TRBV21-1-201ENST00000453262 RNF25Q96BH1 459 aaPredicted RBP11.47□□□□□ -0.57
TRBV21-1-201ENST00000453262 ALS2Q96Q42 1657 aa11.46□□□□□ -0.57
TRBV21-1-201ENST00000453262 IQSEC2Q5JU85 1478 aa11.46□□□□□ -0.57
TRBV21-1-201ENST00000453262 TTC21BQ7Z4L5 1316 aa11.46□□□□□ -0.57
TRBV21-1-201ENST00000453262 HOXB1P14653 301 aaPredicted RBP11.46□□□□□ -0.57
TRBV21-1-201ENST00000453262 AMER1Q5JTC6 1135 aaPredicted RBP11.46□□□□□ -0.57
TRBV21-1-201ENST00000453262 LMOD2Q6P5Q4 547 aa11.46□□□□□ -0.57
TRBV21-1-201ENST00000453262 NME9Q86XW9 330 aa11.46□□□□□ -0.57
TRBV21-1-201ENST00000453262 GGNBP2Q9H3C7 697 aa11.46□□□□□ -0.57
TRBV21-1-201ENST00000453262 TOM1O60784 492 aa11.45□□□□□ -0.58
TRBV21-1-201ENST00000453262 TNNT2P45379 298 aaPredicted RBP11.45□□□□□ -0.58
TRBV21-1-201ENST00000453262 DOK7Q18PE1 504 aa11.45□□□□□ -0.58
TRBV21-1-201ENST00000453262 NUTM2GQ5VZR2 741 aa11.45□□□□□ -0.58
TRBV21-1-201ENST00000453262 KRT28Q7Z3Y7 464 aa11.45□□□□□ -0.58
TRBV21-1-201ENST00000453262 MORC1Q86VD1 984 aa11.45□□□□□ -0.58
TRBV21-1-201ENST00000453262 LTN1O94822 1766 aa11.44□□□□□ -0.58
TRBV21-1-201ENST00000453262 NPHP3Q7Z494 1330 aa11.44□□□□□ -0.58
TRBV21-1-201ENST00000453262 USP54Q70EL1 1684 aa11.44□□□□□ -0.58
TRBV21-1-201ENST00000453262 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.44□□□□□ -0.58
TRBV21-1-201ENST00000453262 MICALL2Q8IY33 904 aa11.44□□□□□ -0.58
TRBV21-1-201ENST00000453262 ZFP91Q96JP5 570 aaPredicted RBP11.44□□□□□ -0.58
TRBV21-1-201ENST00000453262 PRKRIP1Q9H875 184 aaPredicted RBP11.44□□□□□ -0.58
TRBV21-1-201ENST00000453262 PXDNQ92626 1479 aa11.44□□□□□ -0.58
TRBV21-1-201ENST00000453262 NSD2O96028 1365 aa11.43□□□□□ -0.58
TRBV21-1-201ENST00000453262 TTC21AQ8NDW8 1320 aa11.43□□□□□ -0.58
TRBV21-1-201ENST00000453262 FYB1O15117 783 aa11.43□□□□□ -0.58
TRBV21-1-201ENST00000453262 TMEM92Q6UXU6 159 aa11.43□□□□□ -0.58
TRBV21-1-201ENST00000453262 SSH2Q76I76 1423 aa11.43□□□□□ -0.58
TRBV21-1-201ENST00000453262 PARD3Q8TEW0 1356 aa11.42□□□□□ -0.58
TRBV21-1-201ENST00000453262 PHRF1Q9P1Y6 1649 aaKnown RBP11.42□□□□□ -0.58
TRBV21-1-201ENST00000453262 NPC1L1Q9UHC9 1359 aa11.42□□□□□ -0.58
TRBV21-1-201ENST00000453262 SOX12O15370 315 aa11.42□□□□□ -0.58
TRBV21-1-201ENST00000453262 RALBP1Q15311 655 aa11.42□□□□□ -0.58
TRBV21-1-201ENST00000453262 ABTB2Q8N961 1025 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms