RNA–Protein interactions for RNA: ENST00000450991.6

NECAP1-202, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 1 (best)

Gene NECAP1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-202ENST00000450991 PHF23Q9BUL5 403 aaPredicted RBP10.87□□□□□ -0.67
NECAP1-202ENST00000450991 RRP7AQ9Y3A4 280 aaKnown RBP10.87□□□□□ -0.67
NECAP1-202ENST00000450991 NEUROD2Q15784 382 aa10.87□□□□□ -0.67
NECAP1-202ENST00000450991 HMOX1P09601 288 aa10.86□□□□□ -0.67
NECAP1-202ENST00000450991 IL13P35225 146 aa10.86□□□□□ -0.67
NECAP1-202ENST00000450991 SLFN5Q08AF3 891 aa10.86□□□□□ -0.67
NECAP1-202ENST00000450991 DUSP27Q5VZP5 1158 aa10.86□□□□□ -0.67
NECAP1-202ENST00000450991 ALS2Q96Q42 1657 aa10.86□□□□□ -0.67
NECAP1-202ENST00000450991 PHRF1Q9P1Y6 1649 aaKnown RBP10.86□□□□□ -0.67
NECAP1-202ENST00000450991 AMPHP49418 695 aa10.86□□□□□ -0.67
NECAP1-202ENST00000450991 IRX6P78412 446 aaPredicted RBP10.86□□□□□ -0.67
NECAP1-202ENST00000450991 CCDC27Q2M243 656 aa10.85□□□□□ -0.67
NECAP1-202ENST00000450991 ERICH6BQ5W0A0 696 aa10.85□□□□□ -0.67
NECAP1-202ENST00000450991 WWC1Q8IX03 1113 aa10.85□□□□□ -0.67
NECAP1-202ENST00000450991 NPHP3Q7Z494 1330 aa10.85□□□□□ -0.67
NECAP1-202ENST00000450991 EIF4A2Q14240 407 aaKnown RBP10.85□□□□□ -0.67
NECAP1-202ENST00000450991 RCAN3Q9UKA8 241 aa10.85□□□□□ -0.67
NECAP1-202ENST00000450991 SPINK5Q9NQ38 1064 aaPredicted RBP10.84□□□□□ -0.67
NECAP1-202ENST00000450991 NFAT5O94916 1531 aa10.84□□□□□ -0.67
NECAP1-202ENST00000450991 RSPH6AQ9H0K4 717 aa10.84□□□□□ -0.67
NECAP1-202ENST00000450991 E9PSI1 815 aa10.83□□□□□ -0.68
NECAP1-202ENST00000450991 FCHSD2O94868 740 aa10.83□□□□□ -0.68
NECAP1-202ENST00000450991 CABLES1Q8TDN4 633 aa10.83□□□□□ -0.68
NECAP1-202ENST00000450991 LTV1Q96GA3 475 aaPredicted RBP10.83□□□□□ -0.68
NECAP1-202ENST00000450991 PNNQ9H307 717 aaKnown RBP10.83□□□□□ -0.68
NECAP1-202ENST00000450991 GCP02774 474 aa10.83□□□□□ -0.68
NECAP1-202ENST00000450991 PRKAR2BP31323 418 aa10.83□□□□□ -0.68
NECAP1-202ENST00000450991 AEBP1Q8IUX7 1158 aa10.83□□□□□ -0.68
NECAP1-202ENST00000450991 SBNO1A3KN83 1393 aa10.82□□□□□ -0.68
NECAP1-202ENST00000450991 HOXC9P31274 260 aa10.82□□□□□ -0.68
NECAP1-202ENST00000450991 WDR63Q8IWG1 891 aa10.82□□□□□ -0.68
NECAP1-202ENST00000450991 FLT4P35916 1363 aa10.82□□□□□ -0.68
NECAP1-202ENST00000450991 SLIT3O75094 1523 aa10.82□□□□□ -0.68
NECAP1-202ENST00000450991 MAPK8IP3Q9UPT6 1336 aa10.82□□□□□ -0.68
NECAP1-202ENST00000450991 TMPOP42166 694 aaKnown RBP10.82□□□□□ -0.68
NECAP1-202ENST00000450991 RRP1P56182 461 aaKnown RBP10.82□□□□□ -0.68
NECAP1-202ENST00000450991 CRYBG1Q9Y4K1 1723 aa10.81□□□□□ -0.68
NECAP1-202ENST00000450991 RGPD2P0DJD1 1756 aa10.81□□□□□ -0.68
NECAP1-202ENST00000450991 KIF24Q5T7B8 1368 aa10.81□□□□□ -0.68
NECAP1-202ENST00000450991 ZC3H6P61129 1189 aaKnown RBP10.8□□□□□ -0.68
NECAP1-202ENST00000450991 SULT6B1Q6IMI4 303 aa10.8□□□□□ -0.68
NECAP1-202ENST00000450991 KCNH5Q8NCM2 988 aa10.8□□□□□ -0.68
NECAP1-202ENST00000450991 PHACTR3Q96KR7 559 aa10.8□□□□□ -0.68
NECAP1-202ENST00000450991 LTBP4Q8N2S1 1624 aa10.8□□□□□ -0.68
NECAP1-202ENST00000450991 PXDNQ92626 1479 aa10.8□□□□□ -0.68
NECAP1-202ENST00000450991 USP19O94966 1318 aa10.8□□□□□ -0.68
NECAP1-202ENST00000450991 SPATA31A3Q5VYP0 1347 aa10.8□□□□□ -0.68
NECAP1-202ENST00000450991 RGPD5Q99666 1765 aa10.8□□□□□ -0.68
NECAP1-202ENST00000450991 TRIM35Q9UPQ4 493 aa10.8□□□□□ -0.68
NECAP1-202ENST00000450991 TNS3Q68CZ2 1445 aa10.8□□□□□ -0.68
NECAP1-202ENST00000450991 ARHGEF25Q86VW2 580 aa10.78□□□□□ -0.68
NECAP1-202ENST00000450991 EYA1Q99502 592 aa10.78□□□□□ -0.68
NECAP1-202ENST00000450991 SOS2Q07890 1332 aaPredicted RBP10.78□□□□□ -0.68
NECAP1-202ENST00000450991 RTL1A6NKG5 1358 aa10.78□□□□□ -0.68
NECAP1-202ENST00000450991 USHBP1Q8N6Y0 703 aa10.78□□□□□ -0.68
NECAP1-202ENST00000450991 IP6K1Q92551 441 aa10.78□□□□□ -0.68
NECAP1-202ENST00000450991 PPP4R2Q9NY27 417 aa10.78□□□□□ -0.68
NECAP1-202ENST00000450991 ARHGEF10O15013 1369 aa10.77□□□□□ -0.68
NECAP1-202ENST00000450991 RIPK4P57078 832 aa10.77□□□□□ -0.68
NECAP1-202ENST00000450991 MED1Q15648 1581 aaPredicted RBP10.77□□□□□ -0.69
NECAP1-202ENST00000450991 NEFMP07197 916 aa10.77□□□□□ -0.69
NECAP1-202ENST00000450991 NFE2L2Q16236 605 aa10.77□□□□□ -0.69
NECAP1-202ENST00000450991 AXIN2Q9Y2T1 843 aa10.77□□□□□ -0.69
NECAP1-202ENST00000450991 VIRMAQ69YN4 1812 aaKnown RBP10.77□□□□□ -0.69
NECAP1-202ENST00000450991 PIP4K2BP78356 416 aa10.76□□□□□ -0.69
NECAP1-202ENST00000450991 CHRNA2Q15822 529 aa10.76□□□□□ -0.69
NECAP1-202ENST00000450991 IL16Q14005 1332 aa10.76□□□□□ -0.69
NECAP1-202ENST00000450991 KDRP35968 1356 aa10.76□□□□□ -0.69
NECAP1-202ENST00000450991 CAMTA1Q9Y6Y1 1673 aa10.76□□□□□ -0.69
NECAP1-202ENST00000450991 LRRC59Q96AG4 307 aaKnown RBP10.76□□□□□ -0.69
NECAP1-202ENST00000450991 THUMPD2Q9BTF0 503 aaKnown RBP10.75□□□□□ -0.69
NECAP1-202ENST00000450991 NHSL1Q5SYE7 1610 aa10.75□□□□□ -0.69
NECAP1-202ENST00000450991 IGSF1Q8N6C5 1336 aa10.75□□□□□ -0.69
NECAP1-202ENST00000450991 COL18A1P39060 1754 aa10.74□□□□□ -0.69
NECAP1-202ENST00000450991 HAP1P54257 671 aaPredicted RBP10.74□□□□□ -0.69
NECAP1-202ENST00000450991 NBPF6Q5VWK0 638 aa10.74□□□□□ -0.69
NECAP1-202ENST00000450991 NBPF4Q96M43 638 aa10.74□□□□□ -0.69
NECAP1-202ENST00000450991 MYH16Q9H6N6 1097 aa10.74□□□□□ -0.69
NECAP1-202ENST00000450991 ABCA3Q99758 1704 aa10.74□□□□□ -0.69
NECAP1-202ENST00000450991 ANKRD24Q8TF21 1146 aa10.74□□□□□ -0.69
NECAP1-202ENST00000450991 KIAA0232Q92628 1395 aa10.74□□□□□ -0.69
NECAP1-202ENST00000450991 LRRC37A3O60309 1634 aa10.73□□□□□ -0.69
NECAP1-202ENST00000450991 FAM83GA6ND36 823 aa10.73□□□□□ -0.69
NECAP1-202ENST00000450991 PLIN1O60240 522 aa10.73□□□□□ -0.69
NECAP1-202ENST00000450991 FANCIQ9NVI1 1328 aa10.73□□□□□ -0.69
NECAP1-202ENST00000450991 DCTN1Q14203 1278 aa10.73□□□□□ -0.69
NECAP1-202ENST00000450991 TULP1O00294 542 aaPredicted RBP10.72□□□□□ -0.69
NECAP1-202ENST00000450991 LMO7Q8WWI1 1683 aa10.72□□□□□ -0.69
NECAP1-202ENST00000450991 FAM208AQ9UK61 1670 aaKnown RBP10.72□□□□□ -0.69
NECAP1-202ENST00000450991 UBAP1LF5GYI3 381 aa10.72□□□□□ -0.69
NECAP1-202ENST00000450991 TSR2Q969E8 191 aaKnown RBP10.72□□□□□ -0.69
NECAP1-202ENST00000450991 MTHFSDQ2M296 383 aaKnown RBP10.71□□□□□ -0.69
NECAP1-202ENST00000450991 KLHL34Q8N239 644 aa10.71□□□□□ -0.69
NECAP1-202ENST00000450991 EXOC6Q8TAG9 804 aa10.71□□□□□ -0.69
NECAP1-202ENST00000450991 PRDM11Q9NQV5 511 aa10.71□□□□□ -0.69
NECAP1-202ENST00000450991 ROBO1Q9Y6N7 1651 aa10.71□□□□□ -0.7
NECAP1-202ENST00000450991 TOM1O60784 492 aa10.7□□□□□ -0.7
NECAP1-202ENST00000450991 BCAR3O75815 825 aa10.7□□□□□ -0.7
NECAP1-202ENST00000450991 LMOD3Q0VAK6 560 aa10.7□□□□□ -0.7
NECAP1-202ENST00000450991 B4GALNT3Q6L9W6 998 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms